FFCP PHASE1:Hg19::chr13:28494109..28494122,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.58e-14;3 | |ontology_enrichment_celltype_v019=CL:0002178;6.58e-14;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,8.02e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.67e-11;1 | |ontology_enrichment_development_v019=UBERON:0006242;4.67e-11;1 | ||
|ontology_enrichment_disease=DOID:3119!1.53e-19!14;DOID:305!1.17e-14!106;DOID:0050687!2.49e-11!143;DOID:162!9.21e-11!235;DOID:14566!2.29e-10!239;DOID:299!3.31e-10!25;DOID:3493!1.87e-08!2;DOID:4929!4.31e-08!2 | |ontology_enrichment_disease=DOID:3119!1.53e-19!14;DOID:305!1.17e-14!106;DOID:0050687!2.49e-11!143;DOID:162!9.21e-11!235;DOID:14566!2.29e-10!239;DOID:299!3.31e-10!25;DOID:3493!1.87e-08!2;DOID:4929!4.31e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.60e-11;14!DOID:0060060;1.69e-11;1!DOID:0060061;1.69e-11;1!DOID:8691;1.69e-11;1!DOID:299;1.09e-09;25 | |ontology_enrichment_disease_v019=DOID:3119;1.60e-11;14!DOID:0060060;1.69e-11;1!DOID:0060061;1.69e-11;1!DOID:8691;1.69e-11;1!DOID:299;1.09e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.60e-11,1;DOID:0060061,1.60e-11,1;DOID:8691,1.60e-11,1;DOID:3119,1.77e-11,14;DOID:299,1.07e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.23e-19!35;UBERON:0000160!2.53e-16!27;UBERON:0002108!1.32e-14!14;UBERON:0002294!1.63e-12!7;UBERON:0001173!1.63e-12!7;UBERON:0004912!1.63e-12!7;UBERON:0001007!5.80e-10!155;UBERON:0001555!5.80e-10!155;UBERON:0007026!5.80e-10!155;UBERON:0004921!7.38e-10!129;UBERON:0004185!7.38e-10!129;UBERON:0002114!1.22e-09!12;UBERON:0002075!3.75e-09!18;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0002394!2.63e-08!4;UBERON:0003928!2.63e-08!4;UBERON:0003350!4.66e-07!5;UBERON:0000077!5.90e-07!130 | |ontology_enrichment_uberon=UBERON:0005409!2.23e-19!35;UBERON:0000160!2.53e-16!27;UBERON:0002108!1.32e-14!14;UBERON:0002294!1.63e-12!7;UBERON:0001173!1.63e-12!7;UBERON:0004912!1.63e-12!7;UBERON:0001007!5.80e-10!155;UBERON:0001555!5.80e-10!155;UBERON:0007026!5.80e-10!155;UBERON:0004921!7.38e-10!129;UBERON:0004185!7.38e-10!129;UBERON:0002114!1.22e-09!12;UBERON:0002075!3.75e-09!18;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0002394!2.63e-08!4;UBERON:0003928!2.63e-08!4;UBERON:0003350!4.66e-07!5;UBERON:0000077!5.90e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.43e-20;22!UBERON:0002108;1.77e-18;4!UBERON:0000160;9.62e-14;17!UBERON:0004921;2.93e-11;33!UBERON:0002331;6.68e-10;10!UBERON:0000945;1.04e-08;5!UBERON:0010039;1.04e-08;5!UBERON:0000178;9.34e-07;15!UBERON:0000179;9.34e-07;15!UBERON:0000463;9.34e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0005409;2.43e-20;22!UBERON:0002108;1.77e-18;4!UBERON:0000160;9.62e-14;17!UBERON:0004921;2.93e-11;33!UBERON:0002331;6.68e-10;10!UBERON:0000945;1.04e-08;5!UBERON:0010039;1.04e-08;5!UBERON:0000178;9.34e-07;15!UBERON:0000179;9.34e-07;15!UBERON:0000463;9.34e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.77e-18,4;UBERON:0005409,6.79e-18,25;UBERON:0000160,9.49e-14,17;UBERON:0002331,6.68e-10,10;UBERON:0000358,6.68e-10,10;UBERON:0000307,6.68e-10,10;UBERON:0000091,6.68e-10,10;UBERON:0000087,6.68e-10,10;UBERON:0007010,6.68e-10,10;UBERON:0007806,6.68e-10,10;UBERON:0008780,6.68e-10,10;UBERON:0005728,6.68e-10,10;UBERON:0000178,9.34e-07,15;UBERON:0000179,9.34e-07,15;UBERON:0000463,9.34e-07,15 | |||
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| ||
|short_description=p2@PDX1 | |short_description=p2@PDX1 | ||
}} | }} |
Revision as of 06:01, 20 November 2012
Short description: | p2@PDX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PDX1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -34bp_to_ENST00000381033_5end |
EntrezGene: | PDX1 |
HGNC: | 6107 |
UniProt: | P52945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 8.02e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.77e-18 | 4 |
gastrointestinal system | 6.79e-18 | 25 |
intestine | 9.49e-14 | 17 |
umbilical cord | 6.68e-10 | 10 |
blastocyst | 6.68e-10 | 10 |
blastula | 6.68e-10 | 10 |
bilaminar disc | 6.68e-10 | 10 |
inner cell mass | 6.68e-10 | 10 |
cleaving embryo | 6.68e-10 | 10 |
connecting stalk | 6.68e-10 | 10 |
inner cell mass derived epiblast | 6.68e-10 | 10 |
extraembryonic mesoderm | 6.68e-10 | 10 |
blood | 9.34e-07 | 15 |
haemolymphatic fluid | 9.34e-07 | 15 |
organism substance | 9.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.60e-11 | 1 |
cutaneous T cell lymphoma | 1.60e-11 | 1 |
mycosis fungoides | 1.60e-11 | 1 |
gastrointestinal system cancer | 1.77e-11 | 14 |
adenocarcinoma | 1.07e-09 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.