FFCP PHASE1:Hg19::chr10:103880209..103880284,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8861|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6532|TSSclassifier=S|UniProt=Q86U70|association_with_transcript=0bp_to_ENST00000425280,NM_001113407,uc009xwz.2_5end|description=CAGE_peak_3_at_LDB1_5end|id=chr10:103880209..103880284,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.44e-09!115;UBERON:0004121!7.48e-09!169;UBERON:0000924!9.98e-09!173;UBERON:0006601!9.98e-09!173|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.65e-09,114;UBERON:0004121,1.07e-08,171;UBERON:0000924,1.07e-08,171;UBERON:0006601,1.07e-08,171|phase1_expression=3.63356758541113,8.13581990785736,2.96004248601539,7.00513088471913,3.5756887554183,3.48935409640147,0,6.31719873426831,7.83556884599516,4.17747692052565,18.1428303672831,4.80571018686379,11.3419800638235,2.59909341216098,3.31397375727916,1.34465029290355,1.20538905604795,3.65155045193687,5.36726078669558,7.75662665883764,12.6480428571437,8.14982275843028,5.43848375549008,8.34933992944594,6.02604670055053,9.2460220955021,8.04585776609468,7.47752422479953,5.90046415273356,5.75744097145819,7.7408061658038,8.27479102031034,10.843413076017,2.58827807116751,8.83126086615439,7.96147701929561,5.5784083473621,4.9859586767869,15.8430113501412,16.9268479158364,8.2848725468772,8.09734165047449,12.1060516788068,10.1778767145695,5.29026321164333,7.76268995801012,3.25400651667958,4.11167888021826,3.40677007984614,3.45230870786581,3.58624989140741,2.83778675866302,4.13694816883942,2.5819387343353,12.1883837934908,5.27078550719293,2.45615535052061,1.79778787556068,3.36692281607993,1.60464513538047,3.83602275479425,0.989553900560148,2.79249120670285,1.70489900213078,3.77272010217159,0.56738522469114,0,5.27622197039161,5.21482918420201,1.73751075764093,6.05399502633369,0.368277635987565,1.89877432464531,4.43636101255078,8.07896339867165,4.19317291016752,5.39177429503177,4.95583746376971,8.03627933485401,3.70516566863623,6.96208370196815,6.75857368929146,3.51992488922645,4.91524750135918,4.44754626931777,4.69403244823158,5.60554381850417,4.59801951963587,6.61044872784862,2.86216126360609,5.12291672198504,3.52342313622563,6.88091810625412,6.60856642895129,3.92355994087075,6.58460211937693,6.68813218387032,5.50215067848831,10.896879446974,4.51403537554831,2.93330039970231,3.78758244587787,5.84480185223734,7.01885878376594,4.41908861212256,3.54454231333794,5.95768500283034,10.8877621766824,8.32379824383221,6.41307827954337,8.0141505157896,2.89803085735052,4.74517002118593,4.28065324943541,5.22677619024884,4.19244567980995,1.53288197440768,4.46715679127419,6.32549230048757,9.875527844047,5.85975108470777,1.90090408889675,4.81840381048873,4.8634912238679,3.74792179657038,5.91943130110042,10.6746639599736,6.8546292696409,8.29064606928873,7.67569340578835,19.5045493051169,2.68280343881454,5.62595272111533,2.89151321907653,4.01070328508712,8.5459446186886,8.74814541756209,12.1658717575659,8.12999427610984,8.64744650103999,10.8915134259476,9.03755620934217,10.9288586487763,7.78647329847302,7.14004266040303,5.04976238167875,11.1684686835847,2.14641561874808,1.71598473234038,1.85728750664782,3.57772333260069,2.58070378531837,4.51282652089873,2.26123176769604,2.51699661725944,4.40188867104108,2.50793959844173,4.90991842421725,4.62496141492723,2.34304428935269,1.20848795132744,2.28081631715554,4.63717909341522,3.67663080345869,6.48113558305408,2.32179293538607,5.16417557040191,3.71617885594963,6.13266549863533,0.949265659568129,6.41206103756425,6.58902087180316,15.511210565933,8.72188104285069,9.44246708221105,4.55869841992487,14.4326007086408,6.3104056564739,5.32002573297536,2.80338800071154,2.1349799145941,10.6067045819379,10.8923862389918,4.71487352243908,4.7403951902903,10.1409476522104,11.5235184896,6.09235722767871,5.93104145977609,3.4228309292667,5.38015249986484,6.81120092133836,4.85618833104395,5.05622904128095,5.10385428137233,8.35273357720022,7.02615311995205,5.94001428641027,7.66527480763526,7.28129089550421,5.03032699271367,4.54507507675979,7.63222971218981,3.60183350129438,5.26773145057006,2.45190236639216,8.11285518095623,4.3104229600808,7.35497506324334,7.901623386287,4.02670612203168,8.10245959427886,4.43125875725287,13.6549486224183,5.76962254627928,6.41350062516812,8.08727142837949,12.1168211637175,6.16734320903406,3.07127507955743,12.0703261455649,5.64211750074785,7.12154487704048,5.60456474173561,8.72787585890671,6.02289650316908,20.9794774542904,11.7951493806122,15.1052125730374,11.7136992167369,11.1021174385276,4.74470566798579,10.9514672630871,12.8648187638577,20.7202382028721,13.0023019848954,5.0531563716871,3.54920400119532,4.38320194203064,4.09718750801919,2.42646740011267,3.92182999366331,2.37270619111097,2.02246962240247,3.72820783738158,1.5389886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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6532 | |||
|TSSclassifier=S | |||
|UniProt=Q86U70 | |||
|association_with_transcript=0bp_to_ENST00000425280,NM_001113407,uc009xwz.2_5end | |||
|description=CAGE_peak_3_at_LDB1_5end | |||
|id=chr10:103880209..103880284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-09!115;UBERON:0004121!7.48e-09!169;UBERON:0000924!9.98e-09!173;UBERON:0006601!9.98e-09!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.65e-09,114;UBERON:0004121,1.07e-08,171;UBERON:0000924,1.07e-08,171;UBERON:0006601,1.07e-08,171 | |||
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| |||
|short_description=p3@LDB1 | |||
}} |
Revision as of 11:24, 10 September 2013
Short description: | p3@LDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LDB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000425280, NM_001113407, uc009xwz.2_5end |
EntrezGene: | LDB1 |
HGNC: | 6532 |
UniProt: | Q86U70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.65e-09 | 114 |
ectoderm-derived structure | 1.07e-08 | 171 |
ectoderm | 1.07e-08 | 171 |
presumptive ectoderm | 1.07e-08 | 171 |
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