FFCP PHASE1:Hg19::chr10:122552912..122552925,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-40bp_to_uc001lfa.1_5end|coexpression_cluster_id=C14|description=CAGE_peak_1_at_uc001lfa.1_5end|id=chr10:122552912..122552925,-|ontology_enrichment_celltype=CL:0000842!1.09e-18!3;CL:0000094!1.46e-18!8;CL:0000224!3.72e-14!4;CL:0000081!1.89e-13!11;CL:0000080!1.33e-09!6;CL:0000775!3.92e-09!3;CL:0000767!1.02e-08!3|ontology_enrichment_celltype_v019=CL:0000775;1.94e-17;3!CL:0000226;3.48e-17;3!CL:0000842;3.48e-17;3!CL:0000094;1.94e-14;8!CL:0000081;1.15e-10;11!CL:0000771;2.12e-07;2|ontology_enrichment_celltype_v019_2=CL:0000775,1.94e-17,3;CL:0000226,3.20e-17,3;CL:0000842,3.20e-17,3;CL:0000094,1.94e-14,8;CL:0000081,1.15e-10,11;CL:0000771,2.12e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!5.15e-57!15;UBERON:0000179!5.15e-57!15;UBERON:0000463!5.15e-57!15;UBERON:0002390!1.13e-11!102;UBERON:0003061!1.13e-11!102;UBERON:0002193!2.40e-10!112;UBERON:0002106!1.29e-08!3;UBERON:0004854!1.29e-08!3;UBERON:0009034!1.29e-08!3;UBERON:0002095!1.29e-08!3;UBERON:0004782!1.29e-08!3;UBERON:0003281!1.29e-08!3;UBERON:0009664!1.29e-08!3;UBERON:0002296!1.29e-08!3;UBERON:0005602!1.29e-08!3;UBERON:0001179!1.29e-08!3;UBERON:0006293!1.29e-08!3;UBERON:0001009!9.95e-08!113;UBERON:0004535!8.28e-07!110|ontology_enrichment_uberon_v019=UBERON:0000178;4.63e-99;15!UBERON:0000179;4.63e-99;15!UBERON:0000463;4.63e-99;15!UBERON:0002390;4.16e-43;32!UBERON:0002193;1.50e-24;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.22e-99,15;UBERON:0000179,4.22e-99,15;UBERON:0000463,4.22e-99,15;UBERON:0002390,5.60e-14,98;UBERON:0003061,5.60e-14,98;UBERON:0004535,1.43e-12,109;UBERON:0002193,1.43e-12,108;UBERON:0001009,3.39e-12,112;UBERON:0007023,6.05e-08,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,1.14950487990897,0,0,0,0,0,1.32171328579026,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.50999940573032,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3723804616085,23.7037534214136,19.9376515510957,11.9115887728895,13.5749550118444,18.8057260245888,21.0612260522865,14.2762531732969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@uc001lfa.1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_uc001lfa.1_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_uc001lfa.1_5end | |||
|id=chr10:122552912..122552925,- | |||
|ontology_enrichment_celltype=CL:0000842!1.09e-18!3;CL:0000094!1.46e-18!8;CL:0000224!3.72e-14!4;CL:0000081!1.89e-13!11;CL:0000080!1.33e-09!6;CL:0000775!3.92e-09!3;CL:0000767!1.02e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.94e-17;3!CL:0000226;3.48e-17;3!CL:0000842;3.48e-17;3!CL:0000094;1.94e-14;8!CL:0000081;1.15e-10;11!CL:0000771;2.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.94e-17,3;CL:0000226,3.20e-17,3;CL:0000842,3.20e-17,3;CL:0000094,1.94e-14,8;CL:0000081,1.15e-10,11;CL:0000771,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.15e-57!15;UBERON:0000179!5.15e-57!15;UBERON:0000463!5.15e-57!15;UBERON:0002390!1.13e-11!102;UBERON:0003061!1.13e-11!102;UBERON:0002193!2.40e-10!112;UBERON:0002106!1.29e-08!3;UBERON:0004854!1.29e-08!3;UBERON:0009034!1.29e-08!3;UBERON:0002095!1.29e-08!3;UBERON:0004782!1.29e-08!3;UBERON:0003281!1.29e-08!3;UBERON:0009664!1.29e-08!3;UBERON:0002296!1.29e-08!3;UBERON:0005602!1.29e-08!3;UBERON:0001179!1.29e-08!3;UBERON:0006293!1.29e-08!3;UBERON:0001009!9.95e-08!113;UBERON:0004535!8.28e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.63e-99;15!UBERON:0000179;4.63e-99;15!UBERON:0000463;4.63e-99;15!UBERON:0002390;4.16e-43;32!UBERON:0002193;1.50e-24;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.22e-99,15;UBERON:0000179,4.22e-99,15;UBERON:0000463,4.22e-99,15;UBERON:0002390,5.60e-14,98;UBERON:0003061,5.60e-14,98;UBERON:0004535,1.43e-12,109;UBERON:0002193,1.43e-12,108;UBERON:0001009,3.39e-12,112;UBERON:0007023,6.05e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,1.14950487990897,0,0,0,0,0,1.32171328579026,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.50999940573032,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3723804616085,23.7037534214136,19.9376515510957,11.9115887728895,13.5749550118444,18.8057260245888,21.0612260522865,14.2762531732969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@uc001lfa.1 | |||
}} |
Revision as of 12:04, 10 September 2013
Short description: | p1@uc001lfa.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc001lfa.1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -40bp_to_uc001lfa.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.94e-17 | 3 |
single nucleate cell | 3.20e-17 | 3 |
mononuclear cell | 3.20e-17 | 3 |
granulocyte | 1.94e-14 | 8 |
blood cell | 1.15e-10 | 11 |
eosinophil | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.22e-99 | 15 |
haemolymphatic fluid | 4.22e-99 | 15 |
organism substance | 4.22e-99 | 15 |
hematopoietic system | 5.60e-14 | 98 |
blood island | 5.60e-14 | 98 |
cardiovascular system | 1.43e-12 | 109 |
hemolymphoid system | 1.43e-12 | 108 |
circulatory system | 3.39e-12 | 112 |
adult organism | 6.05e-08 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.