FFCP PHASE1:Hg19::chr11:104034748..104034809,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80310|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30620|TSSclassifier=S|UniProt=Q9GZP0|association_with_transcript=25bp_to_ENST00000393158_5end|coexpression_cluster_id=C1327|description=CAGE_peak_2_at_PDGFD_5end|id=chr11:104034748..104034809,-|ontology_enrichment_celltype=CL:0000625!1.25e-07!11;CL:0000136!9.12e-07!15|ontology_enrichment_celltype_v019=CL:0000625;1.62e-09;11|ontology_enrichment_celltype_v019_2=CL:0000625,1.88e-09,11;CL:0000136,6.84e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001009!1.36e-10!113;UBERON:0004535!9.83e-10!110;UBERON:0007023!6.89e-09!115;UBERON:0007100!2.07e-08!27;UBERON:0000948!2.57e-07!24;UBERON:0005498!2.57e-07!24;UBERON:0004140!2.57e-07!24;UBERON:0009881!2.57e-07!24;UBERON:0004141!2.57e-07!24;UBERON:0003084!2.57e-07!24;UBERON:0007005!2.57e-07!24;UBERON:0004139!2.57e-07!24;UBERON:0004291!2.57e-07!24|ontology_enrichment_uberon_v019=UBERON:0007100;1.71e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.28e-08,114;UBERON:0007100,3.34e-08,27;UBERON:0001009,1.30e-07,112;UBERON:0000948,7.23e-07,24;UBERON:0005498,7.23e-07,24;UBERON:0004140,7.23e-07,24;UBERON:0009881,7.23e-07,24;UBERON:0004141,7.23e-07,24;UBERON:0003084,7.23e-07,24;UBERON:0007005,7.23e-07,24;UBERON:0004139,7.23e-07,24;UBERON:0004291,7.23e-07,24;UBERON:0004535,9.39e-07,109|phase1_expression=22.1647622710079,17.1280419112787,19.8745709775319,23.01685862122,8.49226079411847,13.9574163856059,2.53299878168311,0.631719873426831,4.96252693579693,0.245733936501509,0,0,0,2.22779435328084,1.32558950291166,0.672325146451775,1.80808358407193,2.92124036154949,0.975865597581014,0,0.612002073732759,0,3.43483184557268,1.09499540058307,0.753255837568817,0.0764134057479513,0.0821005894499457,0,5.90046415273356,10.747223146722,2.63187409637329,0,0,0,4.6480320348181,6.96629239188365,2.05520307534393,6.09394949385065,3.81034450193269,1.73608696572681,0.223915474239924,3.88672399222775,0.515151135268373,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.28019066769952,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,9.25199300053181,3.36305137788922,2.10707267820062,0.196709770113833,1.17903228824749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.766440987203842,2.06176467289578,2.78321661221453,8.28270077242652,5.20866763085135,11.4054245333805,4.81840381048873,4.60751800155906,6.24653632761729,8.99753557767264,13.1380479507367,4.03213486449465,8.29064606928873,5.64815175142916,39.0090986102339,4.02420515822182,6.39312809217652,0,0.50133791063589,0.434539556882471,0,0,0.283604451492204,0.221729397462564,0.175669571386252,1.96468613246569,0,0,0,0,0.132957960518865,0,1.14398982156026,0.371457501329565,2.58391129576717,1.72046919021225,0.694281003215189,4.52246353539208,0.419499436209906,1.10047216776027,1.8809546988313,11.8871709217891,13.519117982095,9.37217715741077,2.41697590265488,1.52054421143703,2.19655851793353,0.735326160691737,2.43042584364528,1.7859945656816,0.673588117878509,1.91439516821648,0,2.84779697870439,2.93122790288652,0,0,0,0,0.759783069987479,0.264818361626438,7.17091551872034,3.54668382198357,2.24271040056923,1.06748995729705,0.98667019366864,19.2950841947855,1.48181739276657,2.94231425604226,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,1.02077085627447,0.122834317311768,2.47981874821837,5.94001428641027,5.43987244412825,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.877955241761676,0.30648779579902,5.70904623845068,2.49550802952046,0.538168907066586,11.9592137738398,14.4113692788502,0,1.75189299705346,0.515281080091258,1.67505170698431,1.0126579934476,1.55899208257918,1.00973509697646,9.57318945879913,9.69876340912871,1.42003837006646,0.906768884048762,0.339121184620975,0,0,0,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,2.57296375277154,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,2.36315962672562,0,0,1.20097467208968,0,0,0,0,0,1.03993478527958,0,0.115930404975077,1.17408694235822,3.60916119402685,1.38895653772983,4.94660795809955,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0.317489471460845,0,0,0,1.02827492703324,0,0.571652865261156,0,0,0,1.03417372606222,3.57656445851882,0,2.39344304926383,2.08014873822732,0.257207374262142,0,0,11.8671734736262,1.62786481617433,0,0.325736184293735,10.6617584622764,0,7.23454504943007,3.48613383440118,2.0994328148232,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.821905290201534,0,0,21.8704143824139,14.6626750904472,16.6845947163673,2.7950408664471,2.60279707715243,1.54657762555539,0.502548796003046,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80310 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30620 | |||
|TSSclassifier=S | |||
|UniProt=Q9GZP0 | |||
|association_with_transcript=25bp_to_ENST00000393158_5end | |||
|coexpression_cluster_id=C1327 | |||
|description=CAGE_peak_2_at_PDGFD_5end | |||
|id=chr11:104034748..104034809,- | |||
|ontology_enrichment_celltype=CL:0000625!1.25e-07!11;CL:0000136!9.12e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.62e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.88e-09,11;CL:0000136,6.84e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.36e-10!113;UBERON:0004535!9.83e-10!110;UBERON:0007023!6.89e-09!115;UBERON:0007100!2.07e-08!27;UBERON:0000948!2.57e-07!24;UBERON:0005498!2.57e-07!24;UBERON:0004140!2.57e-07!24;UBERON:0009881!2.57e-07!24;UBERON:0004141!2.57e-07!24;UBERON:0003084!2.57e-07!24;UBERON:0007005!2.57e-07!24;UBERON:0004139!2.57e-07!24;UBERON:0004291!2.57e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.71e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.28e-08,114;UBERON:0007100,3.34e-08,27;UBERON:0001009,1.30e-07,112;UBERON:0000948,7.23e-07,24;UBERON:0005498,7.23e-07,24;UBERON:0004140,7.23e-07,24;UBERON:0009881,7.23e-07,24;UBERON:0004141,7.23e-07,24;UBERON:0003084,7.23e-07,24;UBERON:0007005,7.23e-07,24;UBERON:0004139,7.23e-07,24;UBERON:0004291,7.23e-07,24;UBERON:0004535,9.39e-07,109 | |||
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| |||
|short_description=p2@PDGFD | |||
}} |
Revision as of 15:26, 10 September 2013
Short description: | p2@PDGFD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PDGFD_5end |
Coexpression cluster: | C1327_Adipocyte_glioblastoma_Fibroblast_Cardiac_aorta_eye_Mesothelial |
Association with transcript: | 25bp_to_ENST00000393158_5end |
EntrezGene: | PDGFD |
HGNC: | 30620 |
UniProt: | Q9GZP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.88e-09 | 11 |
fat cell | 6.84e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.28e-08 | 114 |
primary circulatory organ | 3.34e-08 | 27 |
circulatory system | 1.30e-07 | 112 |
heart | 7.23e-07 | 24 |
primitive heart tube | 7.23e-07 | 24 |
primary heart field | 7.23e-07 | 24 |
anterior lateral plate mesoderm | 7.23e-07 | 24 |
heart tube | 7.23e-07 | 24 |
heart primordium | 7.23e-07 | 24 |
cardiac mesoderm | 7.23e-07 | 24 |
cardiogenic plate | 7.23e-07 | 24 |
heart rudiment | 7.23e-07 | 24 |
cardiovascular system | 9.39e-07 | 109 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.