FFCP PHASE1:Hg19::chr11:2154832..2154852,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=5466|TSSclassifier=S|UniProt=|association_with_transcript=51bp_to_uc001lvf.2_5end|coexpression_cluster_id=C172|description=CAGE_peak_44_at_IGF2_5end|id=chr11:2154832..2154852,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;3.36e-19;19!CL:0000197;1.92e-08;6!CL:0000098;1.92e-08;6!CL:0002167;1.92e-08;6!CL:0002541;2.92e-08;3!CL:0002577;3.69e-08;3!CL:0002537;5.45e-08;5|ontology_enrichment_celltype_v019_2=CL:0000349,4.48e-19,19;CL:0000197,1.27e-08,6;CL:0000098,1.27e-08,6;CL:0002167,1.27e-08,6;CL:0002541,2.83e-08,3;CL:0002577,3.75e-08,3;CL:0002537,7.70e-08,5|ontology_enrichment_development_v019=UBERON:0003104;5.63e-08;31!UBERON:0004161;3.44e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!4.27e-16!14;UBERON:0000158!4.27e-16!14;UBERON:0000478!3.15e-10!24;UBERON:0003124!3.11e-09!7;UBERON:0004119!1.15e-08!169;UBERON:0000925!1.15e-08!169;UBERON:0006595!1.15e-08!169;UBERON:0000305!1.67e-08!7;UBERON:0004923!3.41e-08!57;UBERON:0004871!3.36e-07!8|ontology_enrichment_uberon_v019=UBERON:0000478;1.16e-19;24!UBERON:0005631;1.16e-18;10!UBERON:0000158;1.16e-18;10!UBERON:0000305;3.24e-12;7!UBERON:0001987;3.12e-10;4!UBERON:0003124;2.92e-08;3!UBERON:0000920;2.92e-08;3!UBERON:0002107;4.20e-08;19!UBERON:0006925;4.20e-08;19|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.60e-27,14;UBERON:0000158,5.60e-27,14;UBERON:0000478,1.51e-19,24;UBERON:0003124,8.28e-17,7;UBERON:0000305,4.77e-12,7;UBERON:0004871,1.98e-10,8;UBERON:0001987,3.17e-10,4;UBERON:0004340,3.17e-10,4;UBERON:0004923,7.82e-09,66;UBERON:0000920,2.83e-08,3;UBERON:0002107,3.93e-08,19;UBERON:0006925,3.93e-08,19;UBERON:0008836,3.93e-08,19;UBERON:0008835,8.83e-07,22;UBERON:0003894,8.83e-07,22|phase1_expression=0.363356758541113,0,0.140954404095971,2.00146596706261,1.78784437770915,1.74467704820074,0,0,0,0.491467873003018,0,10.2667444901181,9.49561121622433,0,0,0,0,0,0,0,2.44800829493104,1.25381888591235,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,9.79499071615998,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,1.97813543422845,0,0,0,0.125118519871964,0.277064115484183,0,0,1.05166641234618,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.929551542956147,0.621966330092223,0.252320850875628,0,0,0,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,1.26755034821831,0,1.18157981336281,0,7.13332943550059,0,0,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05172048183296,0.2933531432838,0,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0.428933980974443,17.9065129779176,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,0,1.62759014219841,1.45579603071565,1.78428988797162,1.10391690523754,2.22568688486155,0,0,2.0694614258501,0,0.368738337083406,0,17.0347006992584,25.0494699381925,0,0,0,3.33440328590885,16.6435439510497,11.4908311465279,0,0,0.561320188866147,0,0,0,0,0,0,0,0.519254429183621,0,6.16383192917273,0,0.0920809889358963,0.459257792658427,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,1.0795795805107,1.54227252690289,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0.15350367472613,0.413509717453592,0,0.290033387828457,0.170453254832202,5.07482603186403,0.165284915360978,0.768760269460425,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,0.762520775695299,0.511795582622668,5.13526785640705,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.847294206991012,0.43050537267123,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.439524537815682,0.121360521749513,0,0.284136146806413,16.2346249621629,9.2059051058118,13.207910190267,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.615602068030377,0,1.84451123510448,0,0,22.0110800215024,2.28993983504656,69.2945208824225,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.134802265961354,20.0644411824697,0,0,0,0,0,6.04953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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5466 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=51bp_to_uc001lvf.2_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_44_at_IGF2_5end | |||
|id=chr11:2154832..2154852,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.36e-19;19!CL:0000197;1.92e-08;6!CL:0000098;1.92e-08;6!CL:0002167;1.92e-08;6!CL:0002541;2.92e-08;3!CL:0002577;3.69e-08;3!CL:0002537;5.45e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.48e-19,19;CL:0000197,1.27e-08,6;CL:0000098,1.27e-08,6;CL:0002167,1.27e-08,6;CL:0002541,2.83e-08,3;CL:0002577,3.75e-08,3;CL:0002537,7.70e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.63e-08;31!UBERON:0004161;3.44e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.27e-16!14;UBERON:0000158!4.27e-16!14;UBERON:0000478!3.15e-10!24;UBERON:0003124!3.11e-09!7;UBERON:0004119!1.15e-08!169;UBERON:0000925!1.15e-08!169;UBERON:0006595!1.15e-08!169;UBERON:0000305!1.67e-08!7;UBERON:0004923!3.41e-08!57;UBERON:0004871!3.36e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.16e-19;24!UBERON:0005631;1.16e-18;10!UBERON:0000158;1.16e-18;10!UBERON:0000305;3.24e-12;7!UBERON:0001987;3.12e-10;4!UBERON:0003124;2.92e-08;3!UBERON:0000920;2.92e-08;3!UBERON:0002107;4.20e-08;19!UBERON:0006925;4.20e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.60e-27,14;UBERON:0000158,5.60e-27,14;UBERON:0000478,1.51e-19,24;UBERON:0003124,8.28e-17,7;UBERON:0000305,4.77e-12,7;UBERON:0004871,1.98e-10,8;UBERON:0001987,3.17e-10,4;UBERON:0004340,3.17e-10,4;UBERON:0004923,7.82e-09,66;UBERON:0000920,2.83e-08,3;UBERON:0002107,3.93e-08,19;UBERON:0006925,3.93e-08,19;UBERON:0008836,3.93e-08,19;UBERON:0008835,8.83e-07,22;UBERON:0003894,8.83e-07,22 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,2.00146596706261,1.78784437770915,1.74467704820074,0,0,0,0.491467873003018,0,10.2667444901181,9.49561121622433,0,0,0,0,0,0,0,2.44800829493104,1.25381888591235,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,9.79499071615998,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,1.97813543422845,0,0,0,0.125118519871964,0.277064115484183,0,0,1.05166641234618,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.929551542956147,0.621966330092223,0.252320850875628,0,0,0,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,1.26755034821831,0,1.18157981336281,0,7.13332943550059,0,0,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05172048183296,0.2933531432838,0,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0.428933980974443,17.9065129779176,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,0,1.62759014219841,1.45579603071565,1.78428988797162,1.10391690523754,2.22568688486155,0,0,2.0694614258501,0,0.368738337083406,0,17.0347006992584,25.0494699381925,0,0,0,3.33440328590885,16.6435439510497,11.4908311465279,0,0,0.561320188866147,0,0,0,0,0,0,0,0.519254429183621,0,6.16383192917273,0,0.0920809889358963,0.459257792658427,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,1.0795795805107,1.54227252690289,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0.15350367472613,0.413509717453592,0,0.290033387828457,0.170453254832202,5.07482603186403,0.165284915360978,0.768760269460425,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,0.762520775695299,0.511795582622668,5.13526785640705,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.847294206991012,0.43050537267123,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.439524537815682,0.121360521749513,0,0.284136146806413,16.2346249621629,9.2059051058118,13.207910190267,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.615602068030377,0,1.84451123510448,0,0,22.0110800215024,2.28993983504656,69.2945208824225,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.134802265961354,20.0644411824697,0,0,0,0,0,6.04953580243319,0.61214552326098,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0,0,0,0,6.99333633537456,0,0,21.1061847370216,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0.558564802544508,0.458320848023367,1.43574604915363,0.199679000498991,0.429226048136571,0.89268582976749,2.48578848200887,0,0,6.53900413149956,5.93394180344398,5.86410831531409,3.6418168160457,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.46872846777995,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,1.75862680413699,23.8512400041998,0.129282956361551,0,0,0,0.213574825135389,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,1.86623178009892,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.705351887381368,1.8374728641192,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,5.23343983959569,0,0,0,0,0,0,0.706437835654626,0,3.64353812307926,1.82631744101899,0,0,1.07214816264985,0,0,9.56220497664187,0.801711364730253,0,0,0,0,0,0,2.11693525095465,0.22910686854405,0,0,0,0,0.365753774946808,1.29485767437579,0.615976841137482,25.5159174894404,3.88568794447312,0,3.38216317774326,0,0,0,0,0.0771741581079447,1.09279780251979,0,0.735444965261716,0,1.17785080268967,0.297046400327086,0,0,0.0939839179798536,0.773494655682926,0,0.178553938605658,0,0,3.65168194123259,0,0.430018749454354,0.473314686579554,0.0679914901909147,0.436350690340377,12.1676173318542,0,0,0.432626562123789,0,0,0,0,0,0,0,0.606229585745915,1.07185652062471,0,0,0.426467963801962,6.66580408098473,0,0.682821857254437,0,0.0636471582781649,1.41482032270754,0.870866991587845,13.68933204341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| |||
|short_description=p44@IGF2 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p44@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_44_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 51bp_to_uc001lvf.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.48e-19 | 19 |
receptor cell | 1.27e-08 | 6 |
sensory epithelial cell | 1.27e-08 | 6 |
olfactory epithelial cell | 1.27e-08 | 6 |
chorionic membrane mesenchymal stem cell | 2.83e-08 | 3 |
placental epithelial cell | 3.75e-08 | 3 |
amnion mesenchymal stem cell | 7.70e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.60e-27 | 14 |
membranous layer | 5.60e-27 | 14 |
extraembryonic structure | 1.51e-19 | 24 |
chorion | 8.28e-17 | 7 |
amnion | 4.77e-12 | 7 |
somatic layer of lateral plate mesoderm | 1.98e-10 | 8 |
placenta | 3.17e-10 | 4 |
allantois | 3.17e-10 | 4 |
organ component layer | 7.82e-09 | 66 |
egg chorion | 2.83e-08 | 3 |
liver | 3.93e-08 | 19 |
digestive gland | 3.93e-08 | 19 |
liver bud | 3.93e-08 | 19 |
hepatic diverticulum | 8.83e-07 | 22 |
liver primordium | 8.83e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.