FFCP PHASE1:Hg19::chr12:2983396..2983423,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:2983396..2983423,+|id=chr12:2983396..2983423,+|ontology_enrichment_celltype=CL:0000548!4.41e-15!679;CL:0000004!4.41e-15!679;CL:0000255!4.41e-15!679;CL:0000012!7.21e-15!682;CL:0000066!8.75e-15!254;CL:0002321!6.93e-12!248;CL:0000220!2.43e-11!246;CL:0000003!5.93e-10!722;CL:0000055!8.87e-09!180;CL:0000333!7.77e-08!41;CL:0000133!1.73e-07!59|ontology_enrichment_celltype_v019=CL:0002605;5.00e-10;3!CL:1000746;8.37e-08;7!CL:1000612;8.37e-08;7!CL:0000128;2.50e-07;7!CL:0000126;2.50e-07;7!CL:0000127;2.50e-07;7!CL:1000449;3.07e-07;15|ontology_enrichment_celltype_v019_2=CL:0002605,1.60e-09,3;CL:1000746,7.53e-08,7;CL:1000612,7.53e-08,7;CL:1000449,2.74e-07,15;CL:0000128,6.84e-07,7;CL:0000126,6.84e-07,7;CL:0000127,6.84e-07,7;CL:0002453,6.84e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!3.74e-23!235;DOID:14566!5.18e-23!239;DOID:0050687!1.30e-14!143;DOID:305!8.21e-14!106;DOID:0050686!5.89e-08!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!8.87e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;1.66e-08;9!UBERON:0001557;1.66e-08;9!UBERON:0000074;8.37e-08;7!UBERON:0001229;8.37e-08;7!UBERON:0006555;3.07e-07;15!UBERON:0000353;3.07e-07;15!UBERON:0004819;3.07e-07;15!UBERON:0001285;3.07e-07;15!UBERON:0007684;3.07e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.88e-09,9;UBERON:0010532,7.53e-08,7;UBERON:0000074,7.53e-08,7;UBERON:0001229,7.53e-08,7;UBERON:0001230,7.53e-08,7;UBERON:0003220,7.53e-08,7;UBERON:0005749,7.53e-08,7;UBERON:0004199,7.53e-08,7;UBERON:0004209,7.53e-08,7;UBERON:0004198,7.53e-08,7;UBERON:0004211,2.74e-07,15;UBERON:0009773,2.74e-07,15;UBERON:0001231,2.74e-07,15;UBERON:0001285,2.74e-07,15;UBERON:0007684,2.74e-07,15;UBERON:0004208,2.74e-07,15;UBERON:0000353,2.84e-07,15;UBERON:0005103,7.33e-07,8;UBERON:0000083,7.33e-07,8;UBERON:0009201,7.33e-07,8;UBERON:0006553,7.33e-07,8;UBERON:0003074,7.33e-07,8;UBERON:0003060,7.33e-07,8;UBERON:0006555,8.70e-07,16;UBERON:0004819,8.70e-07,16|phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0,0,0,0,0.491467873003018,2.09340350391728,0.436882744260345,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0.816002764977012,0.313454721478088,1.14494394852423,1.23186982565596,1.00434111675842,0.305653622991805,0.410502947249729,0.787107813136792,0,0,0,0,0.30120591877825,0.739508020333575,0.697204805222715,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0.657751618414705,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.87834785693126,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,1.10298924103761,0,0.803697554556718,0.44905874525234,0.675668882899933,0,0,0.549605231791222,0,0,0,0,0.379891534993739,0,0,0.709336764396714,0,0,0,0,0.538842688278752,0.817309515567294,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0.704606991862589,2.10434827678571,0.842704840213491,0.204154171254893,1.35117749042945,0.206651562351531,0,0,0,0.718618141816238,0.841680569770331,1.37630371859161,0.277064115484183,0.438977620880838,0.30648779579902,0,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0,0,0,0.302256294682921,1.01736355386293,0.193260853163297,0.272746120590835,0.286804595389004,0.609868530647977,0.795178609928912,0.348581828608555,0.310983165046111,1.00928340350251,0,0,0,2.76269842704961,0.464367928031979,0,1.18306800039844,1.18009283054671,0.964044119533928,0.992645754591546,0.653638332277218,0.474541238222193,1.8876383142423,1.37355025587742,1.92373578473195,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0.514703430895577,0.109750285408626,0,0.502644862058154,0.185176890317059,0.651616610620649,1.03993478527958,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.716468181622786,0.871901815541886,0.383382679165211,0,0,0,0,0,0.253991577168676,0.763976851116555,0,1.71072446022705,0.205654985406647,0.600686115687835,0.285826432630578,0.560655421726804,0.43596006883328,0.66004457238855,0,0,1.690605505112,0,0,1.28603687131071,0,1.8649552531127,0.57191197463259,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,1.148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0,0.955538938977433,0.335566295393377,1.27595303699816,0.487671699929078,0,0,0,0,1.16969731731053,0.198950775161368,0,0.90356865631168,0.329821550236287,0.301925687133347,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.499705779624645,0.178553938605658,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0,0.432626562123789,0.504665699340316,1.63898357945543,3.80095503034311,0.917899467677836,0.534434810531121,0.459474497674225,1.25353769646188,0.606229585745915,0.535928260312357,0,0,0,0,0.452122368852043,0.0620747142958579,0.560659312903067,0,0,0,0,0.134704106029175,0,0.332660356546013,0.162806537221949,0.747091421144008,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr12:2983396..2983423,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:2983396..2983423,+ | |||
|id=chr12:2983396..2983423,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.41e-15!679;CL:0000004!4.41e-15!679;CL:0000255!4.41e-15!679;CL:0000012!7.21e-15!682;CL:0000066!8.75e-15!254;CL:0002321!6.93e-12!248;CL:0000220!2.43e-11!246;CL:0000003!5.93e-10!722;CL:0000055!8.87e-09!180;CL:0000333!7.77e-08!41;CL:0000133!1.73e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.00e-10;3!CL:1000746;8.37e-08;7!CL:1000612;8.37e-08;7!CL:0000128;2.50e-07;7!CL:0000126;2.50e-07;7!CL:0000127;2.50e-07;7!CL:1000449;3.07e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.60e-09,3;CL:1000746,7.53e-08,7;CL:1000612,7.53e-08,7;CL:1000449,2.74e-07,15;CL:0000128,6.84e-07,7;CL:0000126,6.84e-07,7;CL:0000127,6.84e-07,7;CL:0002453,6.84e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.74e-23!235;DOID:14566!5.18e-23!239;DOID:0050687!1.30e-14!143;DOID:305!8.21e-14!106;DOID:0050686!5.89e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!8.87e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.66e-08;9!UBERON:0001557;1.66e-08;9!UBERON:0000074;8.37e-08;7!UBERON:0001229;8.37e-08;7!UBERON:0006555;3.07e-07;15!UBERON:0000353;3.07e-07;15!UBERON:0004819;3.07e-07;15!UBERON:0001285;3.07e-07;15!UBERON:0007684;3.07e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.88e-09,9;UBERON:0010532,7.53e-08,7;UBERON:0000074,7.53e-08,7;UBERON:0001229,7.53e-08,7;UBERON:0001230,7.53e-08,7;UBERON:0003220,7.53e-08,7;UBERON:0005749,7.53e-08,7;UBERON:0004199,7.53e-08,7;UBERON:0004209,7.53e-08,7;UBERON:0004198,7.53e-08,7;UBERON:0004211,2.74e-07,15;UBERON:0009773,2.74e-07,15;UBERON:0001231,2.74e-07,15;UBERON:0001285,2.74e-07,15;UBERON:0007684,2.74e-07,15;UBERON:0004208,2.74e-07,15;UBERON:0000353,2.84e-07,15;UBERON:0005103,7.33e-07,8;UBERON:0000083,7.33e-07,8;UBERON:0009201,7.33e-07,8;UBERON:0006553,7.33e-07,8;UBERON:0003074,7.33e-07,8;UBERON:0003060,7.33e-07,8;UBERON:0006555,8.70e-07,16;UBERON:0004819,8.70e-07,16 | |||
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| |||
|short_description=p@chr12:2983396..2983423,+ | |||
}} |
Revision as of 22:23, 10 September 2013
Short description: | p@chr12:2983396..2983423, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:2983396..2983423, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.60e-09 | 3 |
glomerular cell | 7.53e-08 | 7 |
kidney corpuscule cell | 7.53e-08 | 7 |
epithelial cell of nephron | 2.74e-07 | 15 |
oligodendrocyte | 6.84e-07 | 7 |
macroglial cell | 6.84e-07 | 7 |
astrocyte | 6.84e-07 | 7 |
oligodendrocyte precursor cell | 6.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.88e-09 | 9 |
primitive nephron | 7.53e-08 | 7 |
renal glomerulus | 7.53e-08 | 7 |
renal corpuscle | 7.53e-08 | 7 |
glomerular capsule | 7.53e-08 | 7 |
metanephric mesenchyme | 7.53e-08 | 7 |
glomerular tuft | 7.53e-08 | 7 |
S-shaped body | 7.53e-08 | 7 |
renal vesicle | 7.53e-08 | 7 |
comma-shaped body | 7.53e-08 | 7 |
nephron epithelium | 2.74e-07 | 15 |
renal tubule | 2.74e-07 | 15 |
nephron tubule | 2.74e-07 | 15 |
nephron | 2.74e-07 | 15 |
uriniferous tubule | 2.74e-07 | 15 |
nephrogenic mesenchyme | 2.74e-07 | 15 |
parenchyma | 2.84e-07 | 15 |
mesonephric epithelium | 7.33e-07 | 8 |
mesonephric tubule | 7.33e-07 | 8 |
nephric duct | 7.33e-07 | 8 |
renal duct | 7.33e-07 | 8 |
mesonephric duct | 7.33e-07 | 8 |
pronephric duct | 7.33e-07 | 8 |
excretory tube | 8.70e-07 | 16 |
kidney epithelium | 8.70e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.