FFCP PHASE1:Hg19::chr13:73636310..73636330,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=688|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6349|TSSclassifier=N|UniProt=|association_with_transcript=-375bp_to_ENST00000464404_5end|description=CAGE_peak_5_at_KLF5_5end|id=chr13:73636310..73636330,+|ontology_enrichment_celltype=CL:0000066!1.59e-16!254;CL:0002076!7.91e-15!43;CL:0000223!7.32e-10!59;CL:0002251!2.34e-09!21|ontology_enrichment_celltype_v019=CL:0002623;1.33e-15;3!CL:0002251;1.80e-11;20!CL:0000622;1.48e-09;5!CL:0000154;4.92e-08;6!CL:0002541;9.79e-08;3|ontology_enrichment_celltype_v019_2=CL:0002623,1.41e-15,3;CL:0002251,2.35e-11,20;CL:0000622,1.53e-09,5;CL:0000154,5.06e-08,6;CL:0002541,7.39e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!4.51e-21!106;DOID:0050687!9.37e-18!143;DOID:1749!4.58e-11!14;DOID:299!3.24e-10!25;DOID:162!3.28e-07!235|ontology_enrichment_disease_v019=DOID:1749;3.52e-27;14|ontology_enrichment_disease_v019_2=DOID:1749,2.02e-27,14;DOID:305,2.19e-08,106|ontology_enrichment_uberon=UBERON:0004119!1.09e-14!169;UBERON:0000925!1.09e-14!169;UBERON:0006595!1.09e-14!169;UBERON:0001007!1.84e-13!155;UBERON:0001555!1.84e-13!155;UBERON:0007026!1.84e-13!155;UBERON:0004921!1.34e-10!129;UBERON:0004185!1.34e-10!129;UBERON:0001004!7.89e-09!72;UBERON:0000077!1.12e-08!130|ontology_enrichment_uberon_v019=UBERON:0003343;2.63e-12;4!UBERON:0004785;2.63e-12;4!UBERON:0000161;4.40e-09;19!UBERON:0000166;4.40e-09;19!UBERON:0001041;1.06e-08;14!UBERON:0004921;1.64e-08;33!UBERON:0000974;2.39e-08;6!UBERON:0001044;4.92e-08;6!UBERON:0003293;4.92e-08;6!UBERON:0003294;4.92e-08;6!UBERON:0010047;4.92e-08;6!UBERON:0003408;4.92e-08;6!UBERON:0000167;4.92e-08;6!UBERON:0000165;6.36e-08;28!UBERON:0003124;9.79e-08;3!UBERON:0000920;9.79e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.90e-12,4;UBERON:0004785,2.90e-12,4;UBERON:0000166,2.66e-10,22;UBERON:0001044,5.06e-08,6;UBERON:0003293,5.06e-08,6;UBERON:0003294,5.06e-08,6;UBERON:0010047,5.06e-08,6;UBERON:0000167,5.06e-08,6;UBERON:0001007,5.93e-08,145;UBERON:0001555,5.93e-08,145;UBERON:0007026,5.93e-08,145;UBERON:0000920,7.39e-08,3;UBERON:0000161,1.11e-07,36;UBERON:0000165,1.37e-07,29;UBERON:0000930,1.37e-07,29;UBERON:0004119,7.63e-07,160;UBERON:0000925,7.63e-07,160;UBERON:0006595,7.63e-07,160|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,1.39560233594486,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0,0.474541238222193,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0.658501712451753,0,0.603173834469785,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.567100388969546,0.626909658919938,0,0,0.492663237895943,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,0.601519410909855,1.84161977871793,0,0,0.131124414959424,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.267096106940212,0.826424576804891,0,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.48111056362756,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,3.84991942105343,1.96032172784825,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0,0,0,1.68900326502395,0.19924798825107,0.276283915531148,0,0,0,0,0.359473404589307,1.25314822272926,0,0.493217028184668,0,0,0,0,0,0.260427761085233,0,0,1.0241410345695,0.508507300585533,0.236387681767936,0,0,0,0,0.60298219312704,0,0.110579259931225,0,0.219385397153973,0,3.76444109552229,0.461701551022782,0,0.46112780877612,0.269272933229316,0.651884231532048,1.91400695839152,0.1831951868037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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6349 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-375bp_to_ENST00000464404_5end | |||
|description=CAGE_peak_5_at_KLF5_5end | |||
|id=chr13:73636310..73636330,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.59e-16!254;CL:0002076!7.91e-15!43;CL:0000223!7.32e-10!59;CL:0002251!2.34e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.33e-15;3!CL:0002251;1.80e-11;20!CL:0000622;1.48e-09;5!CL:0000154;4.92e-08;6!CL:0002541;9.79e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.41e-15,3;CL:0002251,2.35e-11,20;CL:0000622,1.53e-09,5;CL:0000154,5.06e-08,6;CL:0002541,7.39e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.51e-21!106;DOID:0050687!9.37e-18!143;DOID:1749!4.58e-11!14;DOID:299!3.24e-10!25;DOID:162!3.28e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.52e-27;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.02e-27,14;DOID:305,2.19e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.09e-14!169;UBERON:0000925!1.09e-14!169;UBERON:0006595!1.09e-14!169;UBERON:0001007!1.84e-13!155;UBERON:0001555!1.84e-13!155;UBERON:0007026!1.84e-13!155;UBERON:0004921!1.34e-10!129;UBERON:0004185!1.34e-10!129;UBERON:0001004!7.89e-09!72;UBERON:0000077!1.12e-08!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.63e-12;4!UBERON:0004785;2.63e-12;4!UBERON:0000161;4.40e-09;19!UBERON:0000166;4.40e-09;19!UBERON:0001041;1.06e-08;14!UBERON:0004921;1.64e-08;33!UBERON:0000974;2.39e-08;6!UBERON:0001044;4.92e-08;6!UBERON:0003293;4.92e-08;6!UBERON:0003294;4.92e-08;6!UBERON:0010047;4.92e-08;6!UBERON:0003408;4.92e-08;6!UBERON:0000167;4.92e-08;6!UBERON:0000165;6.36e-08;28!UBERON:0003124;9.79e-08;3!UBERON:0000920;9.79e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.90e-12,4;UBERON:0004785,2.90e-12,4;UBERON:0000166,2.66e-10,22;UBERON:0001044,5.06e-08,6;UBERON:0003293,5.06e-08,6;UBERON:0003294,5.06e-08,6;UBERON:0010047,5.06e-08,6;UBERON:0000167,5.06e-08,6;UBERON:0001007,5.93e-08,145;UBERON:0001555,5.93e-08,145;UBERON:0007026,5.93e-08,145;UBERON:0000920,7.39e-08,3;UBERON:0000161,1.11e-07,36;UBERON:0000165,1.37e-07,29;UBERON:0000930,1.37e-07,29;UBERON:0004119,7.63e-07,160;UBERON:0000925,7.63e-07,160;UBERON:0006595,7.63e-07,160 | |||
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| |||
|short_description=p5@KLF5 | |||
}} |
Revision as of 02:44, 11 September 2013
Short description: | p5@KLF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KLF5_5end |
Coexpression cluster: | NA |
Association with transcript: | -375bp_to_ENST00000464404_5end |
EntrezGene: | KLF5 |
HGNC: | 6349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.41e-15 | 3 |
epithelial cell of alimentary canal | 2.35e-11 | 20 |
acinar cell | 1.53e-09 | 5 |
protein secreting cell | 5.06e-08 | 6 |
chorionic membrane mesenchymal stem cell | 7.39e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.90e-12 | 4 |
respiratory system mucosa | 2.90e-12 | 4 |
oral opening | 2.66e-10 | 22 |
saliva-secreting gland | 5.06e-08 | 6 |
gland of oral region | 5.06e-08 | 6 |
gland of foregut | 5.06e-08 | 6 |
oral gland | 5.06e-08 | 6 |
oral cavity | 5.06e-08 | 6 |
digestive system | 5.93e-08 | 145 |
digestive tract | 5.93e-08 | 145 |
primitive gut | 5.93e-08 | 145 |
egg chorion | 7.39e-08 | 3 |
orifice | 1.11e-07 | 36 |
mouth | 1.37e-07 | 29 |
stomodeum | 1.37e-07 | 29 |
endoderm-derived structure | 7.63e-07 | 160 |
endoderm | 7.63e-07 | 160 |
presumptive endoderm | 7.63e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.02e-27 | 14 |
carcinoma | 2.19e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.