FFCP PHASE1:Hg19::chr13:98794810..98794826,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10160|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3591|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc001vnh.2_5end|description=CAGE_peak_12_at_FARP1_5end|id=chr13:98794810..98794826,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000222;8.89e-07;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;1.75e-11;2!UBERON:0006601;7.08e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.17e-21!57;UBERON:0005068!1.17e-21!57;UBERON:0006241!1.17e-21!57;UBERON:0007135!1.17e-21!57;UBERON:0002619!2.79e-21!22;UBERON:0003080!2.35e-20!42;UBERON:0002780!1.65e-19!41;UBERON:0001890!1.65e-19!41;UBERON:0006240!1.65e-19!41;UBERON:0001950!3.06e-19!20;UBERON:0002616!3.64e-19!59;UBERON:0000073!3.70e-19!94;UBERON:0001016!3.70e-19!94;UBERON:0001017!1.22e-18!82;UBERON:0001869!1.31e-18!32;UBERON:0001893!2.01e-18!34;UBERON:0002020!2.97e-18!34;UBERON:0003528!2.97e-18!34;UBERON:0000955!3.76e-18!69;UBERON:0006238!3.76e-18!69;UBERON:0005743!5.31e-18!86;UBERON:0007023!6.82e-18!115;UBERON:0000956!7.94e-18!25;UBERON:0000203!7.94e-18!25;UBERON:0002791!1.88e-17!33;UBERON:0002346!2.04e-16!90;UBERON:0003075!8.65e-16!86;UBERON:0007284!8.65e-16!86;UBERON:0003056!5.12e-15!61;UBERON:0000033!8.00e-14!123;UBERON:0000153!1.11e-13!129;UBERON:0007811!1.11e-13!129;UBERON:0000924!3.30e-13!173;UBERON:0006601!3.30e-13!173;UBERON:0004121!1.34e-12!169;UBERON:0000475!4.99e-10!365;UBERON:0000062!1.30e-07!511;UBERON:0001871!1.59e-07!7;UBERON:0000200!1.66e-07!6;UBERON:0000477!3.09e-07!286;UBERON:0000468!3.58e-07!659;UBERON:0001872!4.43e-07!5;UBERON:0000349!6.02e-07!5;UBERON:0000481!6.88e-07!347|ontology_enrichment_uberon_v019=UBERON:0002619;3.04e-69;22!UBERON:0001950;5.90e-68;20!UBERON:0000956;8.64e-61;25!UBERON:0000203;8.64e-61;25!UBERON:0001869;7.50e-51;32!UBERON:0001893;2.21e-47;34!UBERON:0002791;3.56e-45;32!UBERON:0003528;2.99e-44;34!UBERON:0002020;2.99e-44;34!UBERON:0002780;1.67e-33;41!UBERON:0001890;1.67e-33;41!UBERON:0001871;4.33e-26;6!UBERON:0001872;7.31e-26;5!UBERON:0000073;3.04e-21;53!UBERON:0002616;3.04e-21;53!UBERON:0002021;1.85e-17;5!UBERON:0000349;1.10e-16;5!UBERON:0000200;1.14e-13;6!UBERON:0000955;1.35e-13;68!UBERON:0001017;1.15e-12;75!UBERON:0001016;4.55e-12;83!UBERON:0001876;1.75e-11;2!UBERON:0002771;4.47e-11;2!UBERON:0006947;6.20e-08;3!UBERON:0004054;6.20e-08;3!UBERON:0002902;8.89e-07;1!UBERON:0001301;8.89e-07;1!UBERON:0009899;8.89e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.45e-69,22;UBERON:0001950,6.46e-68,20;UBERON:0000956,7.13e-61,25;UBERON:0000203,7.13e-61,25;UBERON:0001869,2.83e-58,32;UBERON:0001893,1.09e-54,34;UBERON:0002791,1.91e-52,32;UBERON:0002780,1.34e-49,41;UBERON:0001890,1.34e-49,41;UBERON:0003080,1.34e-49,41;UBERON:0006240,1.34e-49,41;UBERON:0003528,3.32e-49,34;UBERON:0002020,3.32e-49,34;UBERON:0000073,1.58e-37,53;UBERON:0002616,1.58e-37,53;UBERON:0001049,2.65e-35,56;UBERON:0005068,2.65e-35,56;UBERON:0006241,2.65e-35,56;UBERON:0007135,2.65e-35,56;UBERON:0003056,4.48e-32,61;UBERON:0000955,5.65e-31,68;UBERON:0006238,5.65e-31,68;UBERON:0001017,6.45e-28,81;UBERON:0001871,4.19e-26,6;UBERON:0001872,9.81e-26,5;UBERON:0001016,1.10e-24,89;UBERON:0002346,7.84e-24,86;UBERON:0003075,9.12e-23,82;UBERON:0007284,9.12e-23,82;UBERON:0010371,6.56e-19,104;UBERON:0002021,1.64e-17,5;UBERON:0000349,6.76e-17,5;UBERON:0010314,2.34e-15,132;UBERON:0007023,4.39e-15,114;UBERON:0000200,1.55e-13,6;UBERON:0004121,4.11e-13,171;UBERON:0000924,4.11e-13,171;UBERON:0006601,4.11e-13,171;UBERON:0001876,7.52e-12,2;UBERON:0000025,2.47e-11,192;UBERON:0002771,6.10e-11,2;UBERON:0011216,8.13e-11,223;UBERON:0004111,6.69e-09,240;UBERON:0006947,7.14e-08,3;UBERON:0004054,7.14e-08,3;UBERON:0000483,3.05e-07,306;UBERON:0000119,4.09e-07,309|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.757301322732344,0.368199594569197,0.161646056818812,0.710019185033229,0.403008392910561,0.67824236924195,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3591 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001vnh.2_5end | |||
|description=CAGE_peak_12_at_FARP1_5end | |||
|id=chr13:98794810..98794826,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;8.89e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.75e-11;2!UBERON:0006601;7.08e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-21!57;UBERON:0005068!1.17e-21!57;UBERON:0006241!1.17e-21!57;UBERON:0007135!1.17e-21!57;UBERON:0002619!2.79e-21!22;UBERON:0003080!2.35e-20!42;UBERON:0002780!1.65e-19!41;UBERON:0001890!1.65e-19!41;UBERON:0006240!1.65e-19!41;UBERON:0001950!3.06e-19!20;UBERON:0002616!3.64e-19!59;UBERON:0000073!3.70e-19!94;UBERON:0001016!3.70e-19!94;UBERON:0001017!1.22e-18!82;UBERON:0001869!1.31e-18!32;UBERON:0001893!2.01e-18!34;UBERON:0002020!2.97e-18!34;UBERON:0003528!2.97e-18!34;UBERON:0000955!3.76e-18!69;UBERON:0006238!3.76e-18!69;UBERON:0005743!5.31e-18!86;UBERON:0007023!6.82e-18!115;UBERON:0000956!7.94e-18!25;UBERON:0000203!7.94e-18!25;UBERON:0002791!1.88e-17!33;UBERON:0002346!2.04e-16!90;UBERON:0003075!8.65e-16!86;UBERON:0007284!8.65e-16!86;UBERON:0003056!5.12e-15!61;UBERON:0000033!8.00e-14!123;UBERON:0000153!1.11e-13!129;UBERON:0007811!1.11e-13!129;UBERON:0000924!3.30e-13!173;UBERON:0006601!3.30e-13!173;UBERON:0004121!1.34e-12!169;UBERON:0000475!4.99e-10!365;UBERON:0000062!1.30e-07!511;UBERON:0001871!1.59e-07!7;UBERON:0000200!1.66e-07!6;UBERON:0000477!3.09e-07!286;UBERON:0000468!3.58e-07!659;UBERON:0001872!4.43e-07!5;UBERON:0000349!6.02e-07!5;UBERON:0000481!6.88e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.04e-69;22!UBERON:0001950;5.90e-68;20!UBERON:0000956;8.64e-61;25!UBERON:0000203;8.64e-61;25!UBERON:0001869;7.50e-51;32!UBERON:0001893;2.21e-47;34!UBERON:0002791;3.56e-45;32!UBERON:0003528;2.99e-44;34!UBERON:0002020;2.99e-44;34!UBERON:0002780;1.67e-33;41!UBERON:0001890;1.67e-33;41!UBERON:0001871;4.33e-26;6!UBERON:0001872;7.31e-26;5!UBERON:0000073;3.04e-21;53!UBERON:0002616;3.04e-21;53!UBERON:0002021;1.85e-17;5!UBERON:0000349;1.10e-16;5!UBERON:0000200;1.14e-13;6!UBERON:0000955;1.35e-13;68!UBERON:0001017;1.15e-12;75!UBERON:0001016;4.55e-12;83!UBERON:0001876;1.75e-11;2!UBERON:0002771;4.47e-11;2!UBERON:0006947;6.20e-08;3!UBERON:0004054;6.20e-08;3!UBERON:0002902;8.89e-07;1!UBERON:0001301;8.89e-07;1!UBERON:0009899;8.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.45e-69,22;UBERON:0001950,6.46e-68,20;UBERON:0000956,7.13e-61,25;UBERON:0000203,7.13e-61,25;UBERON:0001869,2.83e-58,32;UBERON:0001893,1.09e-54,34;UBERON:0002791,1.91e-52,32;UBERON:0002780,1.34e-49,41;UBERON:0001890,1.34e-49,41;UBERON:0003080,1.34e-49,41;UBERON:0006240,1.34e-49,41;UBERON:0003528,3.32e-49,34;UBERON:0002020,3.32e-49,34;UBERON:0000073,1.58e-37,53;UBERON:0002616,1.58e-37,53;UBERON:0001049,2.65e-35,56;UBERON:0005068,2.65e-35,56;UBERON:0006241,2.65e-35,56;UBERON:0007135,2.65e-35,56;UBERON:0003056,4.48e-32,61;UBERON:0000955,5.65e-31,68;UBERON:0006238,5.65e-31,68;UBERON:0001017,6.45e-28,81;UBERON:0001871,4.19e-26,6;UBERON:0001872,9.81e-26,5;UBERON:0001016,1.10e-24,89;UBERON:0002346,7.84e-24,86;UBERON:0003075,9.12e-23,82;UBERON:0007284,9.12e-23,82;UBERON:0010371,6.56e-19,104;UBERON:0002021,1.64e-17,5;UBERON:0000349,6.76e-17,5;UBERON:0010314,2.34e-15,132;UBERON:0007023,4.39e-15,114;UBERON:0000200,1.55e-13,6;UBERON:0004121,4.11e-13,171;UBERON:0000924,4.11e-13,171;UBERON:0006601,4.11e-13,171;UBERON:0001876,7.52e-12,2;UBERON:0000025,2.47e-11,192;UBERON:0002771,6.10e-11,2;UBERON:0011216,8.13e-11,223;UBERON:0004111,6.69e-09,240;UBERON:0006947,7.14e-08,3;UBERON:0004054,7.14e-08,3;UBERON:0000483,3.05e-07,306;UBERON:0000119,4.09e-07,309 | |||
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| |||
|short_description=p12@FARP1 | |||
}} |
Revision as of 03:03, 11 September 2013
Short description: | p12@FARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_FARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001vnh.2_5end |
EntrezGene: | FARP1 |
HGNC: | 3591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.