FFCP PHASE1:Hg19::chr14:61113322..61113326,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:61113322..61113326,-|id=chr14:61113322..61113326,-|ontology_enrichment_celltype=CL:0000499!1.80e-12!27;CL:0000327!4.63e-10!14;CL:0000188!1.86e-08!9;CL:0000153!2.66e-08!9;CL:0000447!2.66e-08!9;CL:0000055!5.08e-08!180|ontology_enrichment_celltype_v019=CL:0000153;1.00e-14;9!CL:0000447;1.00e-14;9!CL:0000327;1.26e-13;15!CL:0000188;6.79e-11;9!CL:0000680;3.96e-10;7!CL:0002552;1.14e-09;5!CL:0000214;4.53e-09;3!CL:0000197;6.68e-09;6!CL:0000098;6.68e-09;6!CL:0002167;6.68e-09;6!CL:0002556;4.37e-08;6!CL:0000499;4.93e-08;28!CL:0000138;6.43e-08;6!CL:0000056;5.66e-07;4|ontology_enrichment_celltype_v019_2=CL:0000153,3.42e-15,9;CL:0000447,3.42e-15,9;CL:0000327,5.57e-14,15;CL:0000188,9.86e-11,9;CL:0002552,1.40e-09,5;CL:0000214,1.65e-09,3;CL:0000197,6.82e-09,6;CL:0000098,6.82e-09,6;CL:0002167,6.82e-09,6;CL:0000499,3.61e-08,28;CL:0002556,4.25e-08,6;CL:0000058,4.93e-08,6;CL:0000138,4.93e-08,6;CL:0000515,3.38e-07,4|ontology_enrichment_development_v019=CL:0000515;5.66e-07;4|ontology_enrichment_disease=DOID:0050687!6.52e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000165!2.89e-09!28;UBERON:0000930!2.89e-09!28;UBERON:0000161!8.33e-09!35;UBERON:0000475!3.65e-08!365;UBERON:0003102!4.87e-08!95;UBERON:0002100!2.52e-07!216;UBERON:0001007!8.94e-07!155;UBERON:0001555!8.94e-07!155;UBERON:0007026!8.94e-07!155|ontology_enrichment_uberon_v019=UBERON:0001134;5.61e-16;16!UBERON:0002036;5.61e-16;16!UBERON:0006915;4.53e-09;3!UBERON:0007616;4.53e-09;3!UBERON:0002217;4.53e-09;3!UBERON:0002018;4.53e-09;3!UBERON:0000165;1.17e-08;28!UBERON:0001758;4.37e-08;6!UBERON:0003672;4.37e-08;6!UBERON:0002385;2.90e-07;31!UBERON:0001015;2.90e-07;31!UBERON:0000383;2.90e-07;31!UBERON:0003129;6.37e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000165,6.77e-10,29;UBERON:0000930,6.77e-10,29;UBERON:0006915,1.65e-09,3;UBERON:0007616,1.65e-09,3;UBERON:0002217,1.65e-09,3;UBERON:0002018,1.65e-09,3;UBERON:0001758,4.25e-08,6;UBERON:0003672,4.25e-08,6;UBERON:0005090,5.83e-07,2;UBERON:0001630,5.83e-07,2;UBERON:0003129,6.22e-07,7;UBERON:0000007,8.76e-07,2|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0.866364470720326,0.331397375727916,0,0,0,0,0.61560529038394,0.408001382488506,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,2.1686349143074,1.50401373190767,3.62116297402059,0.795285947051099,1.45990461090791,0.378139268656271,0.443458794925128,0.790513071238134,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.264818361626438,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0,1.42907919878425,8.22989925988845,0.619954687054593,1.18800285728205,3.21447008062124,0,0,2.18836948140286,2.75260743718321,0.554128230968366,1.31693286264251,2.45190236639216,0.751190294532984,0,0.358779271377724,0,0,0,0.412210116953756,0.772921620136887,0.558350568994769,0.337552664482532,0,0.252433774244115,0.368199594569197,0.161646056818812,0.355009592516614,0,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.897048674762886,1.30788020649984,0.80672114403045,0,0,0,0,0,1.02882949704857,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,1.67737398844108,2.29723871668228,1.42636905040718,0.434343920002738,3.49309748335652,1.96967059563885,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0.813795071099207,13.7260768610333,10.8841683166269,8.2005255817646,6.2084949946138,1.20378439891088,0,1.03473071292505,0,0,0.955719759148911,0.587403472388222,1.37257369524342,0,0,0,0,0,0,0,1.07423381301644,0,0,0.511707249066704,0,0,0.462629081407967,0,0.164254312027618,0,0,0,0.200506470303285,0.0920809889358963,0.459257792658427,1.0925470080403,0.786746489756545,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.330037999682352,0,0,0,4.54352375972973,0.770243085573222,1.07452572308291,0.964856007391714,1.6113036730241,3.0453505721988,0.596586391912706,1.06838442776085,0,0.576570202095319,1.02090169995667,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0,1.48863347743867,0.632758849437452,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:61113322..61113326,- | |||
|id=chr14:61113322..61113326,- | |||
|ontology_enrichment_celltype=CL:0000499!1.80e-12!27;CL:0000327!4.63e-10!14;CL:0000188!1.86e-08!9;CL:0000153!2.66e-08!9;CL:0000447!2.66e-08!9;CL:0000055!5.08e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.00e-14;9!CL:0000447;1.00e-14;9!CL:0000327;1.26e-13;15!CL:0000188;6.79e-11;9!CL:0000680;3.96e-10;7!CL:0002552;1.14e-09;5!CL:0000214;4.53e-09;3!CL:0000197;6.68e-09;6!CL:0000098;6.68e-09;6!CL:0002167;6.68e-09;6!CL:0002556;4.37e-08;6!CL:0000499;4.93e-08;28!CL:0000138;6.43e-08;6!CL:0000056;5.66e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.42e-15,9;CL:0000447,3.42e-15,9;CL:0000327,5.57e-14,15;CL:0000188,9.86e-11,9;CL:0002552,1.40e-09,5;CL:0000214,1.65e-09,3;CL:0000197,6.82e-09,6;CL:0000098,6.82e-09,6;CL:0002167,6.82e-09,6;CL:0000499,3.61e-08,28;CL:0002556,4.25e-08,6;CL:0000058,4.93e-08,6;CL:0000138,4.93e-08,6;CL:0000515,3.38e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;5.66e-07;4 | |||
|ontology_enrichment_disease=DOID:0050687!6.52e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!2.89e-09!28;UBERON:0000930!2.89e-09!28;UBERON:0000161!8.33e-09!35;UBERON:0000475!3.65e-08!365;UBERON:0003102!4.87e-08!95;UBERON:0002100!2.52e-07!216;UBERON:0001007!8.94e-07!155;UBERON:0001555!8.94e-07!155;UBERON:0007026!8.94e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.61e-16;16!UBERON:0002036;5.61e-16;16!UBERON:0006915;4.53e-09;3!UBERON:0007616;4.53e-09;3!UBERON:0002217;4.53e-09;3!UBERON:0002018;4.53e-09;3!UBERON:0000165;1.17e-08;28!UBERON:0001758;4.37e-08;6!UBERON:0003672;4.37e-08;6!UBERON:0002385;2.90e-07;31!UBERON:0001015;2.90e-07;31!UBERON:0000383;2.90e-07;31!UBERON:0003129;6.37e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,6.77e-10,29;UBERON:0000930,6.77e-10,29;UBERON:0006915,1.65e-09,3;UBERON:0007616,1.65e-09,3;UBERON:0002217,1.65e-09,3;UBERON:0002018,1.65e-09,3;UBERON:0001758,4.25e-08,6;UBERON:0003672,4.25e-08,6;UBERON:0005090,5.83e-07,2;UBERON:0001630,5.83e-07,2;UBERON:0003129,6.22e-07,7;UBERON:0000007,8.76e-07,2 | |||
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| |||
|short_description=p@chr14:61113322..61113326,- | |||
}} |
Revision as of 04:58, 11 September 2013
Short description: | p@chr14:61113322..61113326, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:61113322..61113326, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.42e-15 | 9 |
carbohydrate secreting cell | 3.42e-15 | 9 |
extracellular matrix secreting cell | 5.57e-14 | 15 |
cell of skeletal muscle | 9.86e-11 | 9 |
fibroblast of gingiva | 1.40e-09 | 5 |
synovial cell | 1.65e-09 | 3 |
receptor cell | 6.82e-09 | 6 |
sensory epithelial cell | 6.82e-09 | 6 |
olfactory epithelial cell | 6.82e-09 | 6 |
stromal cell | 3.61e-08 | 28 |
fibroblast of periodontium | 4.25e-08 | 6 |
chondroblast | 4.93e-08 | 6 |
chondrocyte | 4.93e-08 | 6 |
skeletal muscle myoblast | 3.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mouth | 6.77e-10 | 29 |
stomodeum | 6.77e-10 | 29 |
stratified squamous epithelium | 1.65e-09 | 3 |
layer of synovial tissue | 1.65e-09 | 3 |
synovial joint | 1.65e-09 | 3 |
synovial membrane of synovial joint | 1.65e-09 | 3 |
periodontium | 4.25e-08 | 6 |
dentition | 4.25e-08 | 6 |
muscle structure | 5.83e-07 | 2 |
muscle organ | 5.83e-07 | 2 |
skull | 6.22e-07 | 7 |
pituitary gland | 8.76e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.