FFCP PHASE1:Hg19::chr14:65170917..65170935,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26030|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20364|TSSclassifier=W|UniProt=|association_with_transcript=-218bp_to_ENST00000247226_5end|coexpression_cluster_id=C3444|description=CAGE_peak_5_at_PLEKHG3_5end|id=chr14:65170917..65170935,+|ontology_enrichment_celltype=CL:0000791!1.20e-15!18;CL:0000789!1.20e-15!18;CL:0002420!1.20e-15!18;CL:0002419!1.20e-15!18;CL:0000790!1.20e-15!18;CL:0000037!1.58e-15!172;CL:0000566!1.58e-15!172;CL:0002032!1.17e-14!165;CL:0000837!1.17e-14!165;CL:0000738!1.82e-14!140;CL:0000988!1.69e-13!182;CL:0000625!2.98e-11!11;CL:0000094!9.16e-11!8;CL:0000084!1.05e-09!25;CL:0000827!1.05e-09!25;CL:0000763!1.78e-09!112;CL:0000049!1.78e-09!112;CL:0002031!2.42e-09!124;CL:0002087!3.54e-09!119;CL:0000766!5.24e-09!76;CL:0000624!2.83e-07!6;CL:0000081!3.51e-07!11|ontology_enrichment_celltype_v019=CL:0000094;4.94e-26;8!CL:0000791;2.88e-25;18!CL:0000789;2.88e-25;18!CL:0002419;2.88e-25;18!CL:0000625;6.06e-23;11!CL:0000081;1.17e-18;11!CL:0000084;1.47e-17;25!CL:0000775;3.46e-14;3!CL:0000623;3.94e-14;3!CL:0000771;5.08e-10;2!CL:0002393;9.29e-07;6!CL:0002397;9.29e-07;6|ontology_enrichment_celltype_v019_2=CL:0000094,3.63e-26,8;CL:0000791,1.55e-25,18;CL:0000789,1.55e-25,18;CL:0002420,1.55e-25,18;CL:0002419,1.55e-25,18;CL:0000790,1.55e-25,18;CL:0000625,2.86e-23,11;CL:0000738,8.64e-19,136;CL:0000081,9.41e-19,11;CL:0000084,9.53e-18,25;CL:0000827,9.53e-18,25;CL:0000037,2.01e-16,168;CL:0000988,3.15e-15,177;CL:0002032,1.00e-14,161;CL:0000837,1.00e-14,161;CL:0000775,3.40e-14,3;CL:0000623,4.60e-14,3;CL:0000825,4.60e-14,3;CL:0000838,1.26e-12,52;CL:0000542,2.49e-12,53;CL:0000051,2.49e-12,53;CL:0000771,4.56e-10,2;CL:0002087,1.48e-09,115;CL:0002031,7.34e-09,120;CL:0000766,6.97e-07,72|ontology_enrichment_development_v019=CL:0000790;2.88e-25;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.20e-12!115;UBERON:0000178!4.06e-11!15;UBERON:0000179!4.06e-11!15;UBERON:0000463!4.06e-11!15;UBERON:0002390!2.33e-09!102;UBERON:0003061!2.33e-09!102;UBERON:0002193!6.45e-08!112|ontology_enrichment_uberon_v019=UBERON:0000178;3.62e-26;15!UBERON:0000179;3.62e-26;15!UBERON:0000463;3.62e-26;15!UBERON:0002390;1.74e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.95e-26,15;UBERON:0000179,3.95e-26,15;UBERON:0000463,3.95e-26,15;UBERON:0002390,4.86e-08,98;UBERON:0003061,4.86e-08,98;UBERON:0002193,5.66e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,1.57345710739562,2.68680578668049,0.309632246632152,0,0.30120591877825,0,0,0,0,1.10799081706375,2.60707781711184,2.38711957787437,0,0.647787332037959,0.257575567634187,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.344745680736619,1.29096936716765,0,0.564727018627814,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.983548850569165,1.57204305099666,1.02800749499755,0,0.32592226663359,0,0,2.45103005147382,0.294605907474837,0,0.270803863765016,2.0494611156108,1.56071217071854,0.493313713811028,0.829050053357545,0.579606171470105,0.14828656316206,0,0,5.89208582027344,1.91610246800961,0.68725489096526,1.51811815211702,0.637130828648193,1.95325036156926,0.950452044448374,1.80690142893327,1.66382594500744,0,3.31488152861624,2.46338399076314,2.41928091869679,5.88368430723716,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0.141775097242386,0,0,0,0,1.32072651019839,1.24396869324463,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,4.52817907204986,5.13372145118993,0,0,0,0,0,3.74503511973591,8.97484377612075,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.72571360654893,3.842192080924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.229723400206959,3.55213326462519,1.52927441428475,2.84823593587081,4.76463550915578,2.46817363851717,0.648473311192717,1.08006287447623,2.37937552888281,0,0.962479855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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20364 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-218bp_to_ENST00000247226_5end | |||
|coexpression_cluster_id=C3444 | |||
|description=CAGE_peak_5_at_PLEKHG3_5end | |||
|id=chr14:65170917..65170935,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.20e-15!18;CL:0000789!1.20e-15!18;CL:0002420!1.20e-15!18;CL:0002419!1.20e-15!18;CL:0000790!1.20e-15!18;CL:0000037!1.58e-15!172;CL:0000566!1.58e-15!172;CL:0002032!1.17e-14!165;CL:0000837!1.17e-14!165;CL:0000738!1.82e-14!140;CL:0000988!1.69e-13!182;CL:0000625!2.98e-11!11;CL:0000094!9.16e-11!8;CL:0000084!1.05e-09!25;CL:0000827!1.05e-09!25;CL:0000763!1.78e-09!112;CL:0000049!1.78e-09!112;CL:0002031!2.42e-09!124;CL:0002087!3.54e-09!119;CL:0000766!5.24e-09!76;CL:0000624!2.83e-07!6;CL:0000081!3.51e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.94e-26;8!CL:0000791;2.88e-25;18!CL:0000789;2.88e-25;18!CL:0002419;2.88e-25;18!CL:0000625;6.06e-23;11!CL:0000081;1.17e-18;11!CL:0000084;1.47e-17;25!CL:0000775;3.46e-14;3!CL:0000623;3.94e-14;3!CL:0000771;5.08e-10;2!CL:0002393;9.29e-07;6!CL:0002397;9.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.63e-26,8;CL:0000791,1.55e-25,18;CL:0000789,1.55e-25,18;CL:0002420,1.55e-25,18;CL:0002419,1.55e-25,18;CL:0000790,1.55e-25,18;CL:0000625,2.86e-23,11;CL:0000738,8.64e-19,136;CL:0000081,9.41e-19,11;CL:0000084,9.53e-18,25;CL:0000827,9.53e-18,25;CL:0000037,2.01e-16,168;CL:0000988,3.15e-15,177;CL:0002032,1.00e-14,161;CL:0000837,1.00e-14,161;CL:0000775,3.40e-14,3;CL:0000623,4.60e-14,3;CL:0000825,4.60e-14,3;CL:0000838,1.26e-12,52;CL:0000542,2.49e-12,53;CL:0000051,2.49e-12,53;CL:0000771,4.56e-10,2;CL:0002087,1.48e-09,115;CL:0002031,7.34e-09,120;CL:0000766,6.97e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;2.88e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-12!115;UBERON:0000178!4.06e-11!15;UBERON:0000179!4.06e-11!15;UBERON:0000463!4.06e-11!15;UBERON:0002390!2.33e-09!102;UBERON:0003061!2.33e-09!102;UBERON:0002193!6.45e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.62e-26;15!UBERON:0000179;3.62e-26;15!UBERON:0000463;3.62e-26;15!UBERON:0002390;1.74e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.95e-26,15;UBERON:0000179,3.95e-26,15;UBERON:0000463,3.95e-26,15;UBERON:0002390,4.86e-08,98;UBERON:0003061,4.86e-08,98;UBERON:0002193,5.66e-07,108 | |||
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|short_description=p5@PLEKHG3 | |||
}} |
Revision as of 05:08, 11 September 2013
Short description: | p5@PLEKHG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PLEKHG3_5end |
Coexpression cluster: | C3444_Neutrophils_CD8_Natural_Whole_CD4_Eosinophils_Peripheral |
Association with transcript: | -218bp_to_ENST00000247226_5end |
EntrezGene: | PLEKHG3 |
HGNC: | 20364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.63e-26 | 8 |
mature alpha-beta T cell | 1.55e-25 | 18 |
alpha-beta T cell | 1.55e-25 | 18 |
immature T cell | 1.55e-25 | 18 |
mature T cell | 1.55e-25 | 18 |
immature alpha-beta T cell | 1.55e-25 | 18 |
CD8-positive, alpha-beta T cell | 2.86e-23 | 11 |
leukocyte | 8.64e-19 | 136 |
blood cell | 9.41e-19 | 11 |
T cell | 9.53e-18 | 25 |
pro-T cell | 9.53e-18 | 25 |
hematopoietic stem cell | 2.01e-16 | 168 |
hematopoietic cell | 3.15e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.00e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-14 | 161 |
neutrophil | 3.40e-14 | 3 |
natural killer cell | 4.60e-14 | 3 |
pro-NK cell | 4.60e-14 | 3 |
lymphoid lineage restricted progenitor cell | 1.26e-12 | 52 |
lymphocyte | 2.49e-12 | 53 |
common lymphoid progenitor | 2.49e-12 | 53 |
eosinophil | 4.56e-10 | 2 |
nongranular leukocyte | 1.48e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 7.34e-09 | 120 |
myeloid leukocyte | 6.97e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 3.95e-26 | 15 |
haemolymphatic fluid | 3.95e-26 | 15 |
organism substance | 3.95e-26 | 15 |
hematopoietic system | 4.86e-08 | 98 |
blood island | 4.86e-08 | 98 |
hemolymphoid system | 5.66e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.