FFCP PHASE1:Hg19::chr15:57884117..57884160,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=145781|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26424|TSSclassifier=S|UniProt=P0CAP1|association_with_transcript=0bp_to_ENST00000267853_5end|coexpression_cluster_id=C20|description=CAGE_peak_2_at_GCOM1_5end|id=chr15:57884117..57884160,+|ontology_enrichment_celltype=CL:0002139!7.65e-13!24;CL:0000115!4.99e-10!35;CL:0000071!2.78e-09!18;CL:0002546!2.78e-09!18;CL:0002078!4.26e-07!44|ontology_enrichment_celltype_v019=CL:0002139;2.34e-17;24!CL:0000115;9.31e-13;36!CL:0000071;5.33e-12;18!CL:0002078;3.87e-08;45!CL:0002138;4.27e-07;6|ontology_enrichment_celltype_v019_2=CL:0002139,7.55e-18,24;CL:0000115,1.41e-15,36;CL:0000071,1.88e-12,18;CL:0002546,1.88e-12,18;CL:0002078,2.32e-12,45;CL:0000213,1.36e-07,58;CL:0000215,1.36e-07,58;CL:0005020,4.14e-07,6;CL:0002138,4.14e-07,6;CL:0005022,4.14e-07,6|ontology_enrichment_development_v019=CL:0002546;5.33e-12;18!CL:0005022;4.27e-07;6!UBERON:0006603;9.45e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.12e-29!115;UBERON:0004111!2.25e-10!241;UBERON:0000477!1.80e-09!286;UBERON:0001986!2.78e-09!18;UBERON:0004638!2.78e-09!18;UBERON:0004852!2.78e-09!18;UBERON:0000487!7.86e-09!22;UBERON:0004119!1.22e-08!169;UBERON:0000925!1.22e-08!169;UBERON:0006595!1.22e-08!169;UBERON:0000468!1.72e-08!659;UBERON:0000467!1.82e-08!625;UBERON:0000480!2.65e-08!626;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0006914!3.71e-08!25;UBERON:0004921!6.10e-08!129;UBERON:0004185!6.10e-08!129;UBERON:0000077!2.74e-07!130|ontology_enrichment_uberon_v019=UBERON:0004638;5.33e-12;18!UBERON:0001986;5.33e-12;18!UBERON:0004852;5.33e-12;18!UBERON:0000487;2.44e-11;22!UBERON:0006914;1.80e-10;25|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-21,114;UBERON:0004638,1.88e-12,18;UBERON:0001986,1.88e-12,18;UBERON:0004852,1.88e-12,18;UBERON:0000487,9.01e-12,22;UBERON:0006914,7.57e-11,25;UBERON:0004111,3.18e-08,240;UBERON:0001009,1.68e-07,112;UBERON:0004921,2.46e-07,118|phase1_expression=0.181678379270557,4.06790995392868,0.986680828671798,0,2.23480547213644,0,0,0,0.783556884599516,0.245733936501509,2.09340350391728,0.655324116390517,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0.6024118375565,1.47901604066715,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0,1.90129757680748,0.637812899895131,0.419317291016752,0,0,0,0.285012743741249,0.79566670879636,0.365328307529268,1.75996244461323,1.63841583378639,0.889509253863555,0.426730222566507,0.800791974072025,0,1.32208974556972,2.86216126360609,1.70763890732835,1.76171156811282,3.05818582500183,1.32171328579026,0.560508562981536,0,0.393419540227666,0.393010762749165,0.616804496998528,0,0.651844533267181,1.89379122293893,0,0,0,0,0,0.128091319725675,0,0,0,0,0.741432815810302,1.07016331235885,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.639312809217652,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,5.43563163315507,0,0.370784442784429,1.9472843619281,1.91542711029194,1.32957960518865,0,0,0,5.96287222100115,1.72046919021225,2.77712401286075,2.82653970962005,1.67799774483962,0.550236083880135,2.92592953151535,4.90991842421725,5.69226020298736,14.0582657361161,23.3641003923305,13.6848979029332,48.3242873945376,1.47065232138347,1.62028389576352,9.01927255669206,6.28682243353275,5.40535106319947,3.06633274931766,1.89853131913626,4.946447086121,3.9534125230819,0,1.3082821564276,0,0,0,0,0,0.560677600142307,0,0.24666754841716,2.48968828319813,0.404132016209064,0.326923806226917,0,0,0,0,1.71141546463335,0,0,0,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,5.18217629122586,0.573609190778008,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0.473227200159376,1.18009283054671,0.964044119533928,0.330881918197182,0,0.474541238222193,0.808987848960987,0.98110732562673,0.769494313892781,1.4763109092493,2.80483547606892,0,0,0,0.982827216677626,2.36315962672562,0,0.737930631258681,0.171567810298526,0.219500570817251,1.1240175325762,1.10581869652794,0.462942225792648,0.325808305310325,0,0,0,0,9.09508620894765,11.1116523018387,18.6449069189906,0,0.858486162094873,0.246217006087397,0,0.594524649154913,0,1.00789276919316,5.10390350072591,1.34337784054272,0.581267877027924,1.15014803749563,0,0,0,0.576479813667846,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0,0.871533458600294,0,0,1.0045141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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=145781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26424 | |||
|TSSclassifier=S | |||
|UniProt=P0CAP1 | |||
|association_with_transcript=0bp_to_ENST00000267853_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_GCOM1_5end | |||
|id=chr15:57884117..57884160,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.65e-13!24;CL:0000115!4.99e-10!35;CL:0000071!2.78e-09!18;CL:0002546!2.78e-09!18;CL:0002078!4.26e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.34e-17;24!CL:0000115;9.31e-13;36!CL:0000071;5.33e-12;18!CL:0002078;3.87e-08;45!CL:0002138;4.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.55e-18,24;CL:0000115,1.41e-15,36;CL:0000071,1.88e-12,18;CL:0002546,1.88e-12,18;CL:0002078,2.32e-12,45;CL:0000213,1.36e-07,58;CL:0000215,1.36e-07,58;CL:0005020,4.14e-07,6;CL:0002138,4.14e-07,6;CL:0005022,4.14e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.33e-12;18!CL:0005022;4.27e-07;6!UBERON:0006603;9.45e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-29!115;UBERON:0004111!2.25e-10!241;UBERON:0000477!1.80e-09!286;UBERON:0001986!2.78e-09!18;UBERON:0004638!2.78e-09!18;UBERON:0004852!2.78e-09!18;UBERON:0000487!7.86e-09!22;UBERON:0004119!1.22e-08!169;UBERON:0000925!1.22e-08!169;UBERON:0006595!1.22e-08!169;UBERON:0000468!1.72e-08!659;UBERON:0000467!1.82e-08!625;UBERON:0000480!2.65e-08!626;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0006914!3.71e-08!25;UBERON:0004921!6.10e-08!129;UBERON:0004185!6.10e-08!129;UBERON:0000077!2.74e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.33e-12;18!UBERON:0001986;5.33e-12;18!UBERON:0004852;5.33e-12;18!UBERON:0000487;2.44e-11;22!UBERON:0006914;1.80e-10;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-21,114;UBERON:0004638,1.88e-12,18;UBERON:0001986,1.88e-12,18;UBERON:0004852,1.88e-12,18;UBERON:0000487,9.01e-12,22;UBERON:0006914,7.57e-11,25;UBERON:0004111,3.18e-08,240;UBERON:0001009,1.68e-07,112;UBERON:0004921,2.46e-07,118 | |||
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| |||
|short_description=p2@GCOM1 | |||
}} |
Revision as of 07:34, 11 September 2013
Short description: | p2@GCOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GCOM1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000267853_5end |
EntrezGene: | GCOM1 |
HGNC: | 26424 |
UniProt: | P0CAP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.55e-18 | 24 |
endothelial cell | 1.41e-15 | 36 |
blood vessel endothelial cell | 1.88e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-12 | 18 |
meso-epithelial cell | 2.32e-12 | 45 |
lining cell | 1.36e-07 | 58 |
barrier cell | 1.36e-07 | 58 |
lymphangioblast | 4.14e-07 | 6 |
endothelial cell of lymphatic vessel | 4.14e-07 | 6 |
vascular lymphangioblast | 4.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-21 | 114 |
blood vessel endothelium | 1.88e-12 | 18 |
endothelium | 1.88e-12 | 18 |
cardiovascular system endothelium | 1.88e-12 | 18 |
simple squamous epithelium | 9.01e-12 | 22 |
squamous epithelium | 7.57e-11 | 25 |
anatomical conduit | 3.18e-08 | 240 |
circulatory system | 1.68e-07 | 112 |
subdivision of digestive tract | 2.46e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.