FFCP PHASE1:Hg19::chr15:74466169..74466212,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3671|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6133|TSSclassifier=S|UniProt=O14498|association_with_transcript=82bp_to_NM_005545,uc002axg.1_5end|coexpression_cluster_id=C1751|description=CAGE_peak_4_at_ISLR_5end|id=chr15:74466169..74466212,+|ontology_enrichment_celltype=CL:0000055!6.17e-23!180;CL:0000057!1.02e-18!75;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000183!1.57e-10!59;CL:0000187!5.00e-10!54;CL:0002334!2.18e-09!12;CL:0002620!1.00e-08!23;CL:0000393!5.40e-08!60;CL:0000211!5.40e-08!60;CL:0000136!9.38e-08!15;CL:0000192!4.85e-07!42;CL:0000514!4.85e-07!42;CL:0000499!8.85e-07!27;CL:0000327!8.88e-07!14|ontology_enrichment_celltype_v019=CL:0002334;2.24e-10;12!CL:0000136;4.70e-07;13!CL:0002620;5.28e-07;23!CL:0000327;7.48e-07;15|ontology_enrichment_celltype_v019_2=CL:0000057,6.72e-16,76;CL:0002334,2.12e-10,12;CL:0000680,2.01e-09,58;CL:0000056,2.01e-09,58;CL:0000355,2.01e-09,58;CL:0000187,9.46e-09,55;CL:0000136,1.48e-08,15;CL:0002620,5.07e-07,23;CL:0000327,7.16e-07,15;CL:0000393,8.72e-07,61;CL:0000211,8.72e-07,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.39e-17!115;UBERON:0000475!1.67e-15!365;UBERON:0000914!4.36e-13!83;UBERON:0002329!4.36e-13!83;UBERON:0003077!4.36e-13!83;UBERON:0003059!4.36e-13!83;UBERON:0007282!4.36e-13!83;UBERON:0009618!4.36e-13!83;UBERON:0007285!4.36e-13!83;UBERON:0004290!7.83e-13!70;UBERON:0002385!1.49e-12!63;UBERON:0001015!1.49e-12!63;UBERON:0000383!1.49e-12!63;UBERON:0001134!6.95e-12!61;UBERON:0002036!6.95e-12!61;UBERON:0003082!6.95e-12!61;UBERON:0000479!3.63e-10!787;UBERON:0000486!8.74e-10!82;UBERON:0000481!2.35e-09!347;UBERON:0000468!2.96e-09!659;UBERON:0001013!1.28e-08!14;UBERON:0000477!3.02e-08!286;UBERON:0007100!6.12e-08!27;UBERON:0002616!1.57e-07!59;UBERON:0000948!2.50e-07!24;UBERON:0005498!2.50e-07!24;UBERON:0004140!2.50e-07!24;UBERON:0009881!2.50e-07!24;UBERON:0004141!2.50e-07!24;UBERON:0003084!2.50e-07!24;UBERON:0007005!2.50e-07!24;UBERON:0004139!2.50e-07!24;UBERON:0004291!2.50e-07!24;UBERON:0002199!3.66e-07!45;UBERON:0002416!3.66e-07!45;UBERON:0005256!4.62e-07!143;UBERON:0004872!6.88e-07!84;UBERON:0000480!8.40e-07!626;UBERON:0000119!9.61e-07!312;UBERON:0003102!9.76e-07!95|ontology_enrichment_uberon_v019=UBERON:0001013;1.61e-09;14|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.67e-13,114;UBERON:0000479,1.03e-11,773;UBERON:0002385,2.00e-11,64;UBERON:0001015,2.00e-11,64;UBERON:0000383,2.00e-11,64;UBERON:0001134,1.02e-10,62;UBERON:0002036,1.02e-10,62;UBERON:0003082,1.02e-10,62;UBERON:0003077,1.27e-10,72;UBERON:0007285,1.27e-10,72;UBERON:0002329,2.21e-10,71;UBERON:0003059,2.21e-10,71;UBERON:0007282,2.21e-10,71;UBERON:0004290,2.21e-10,71;UBERON:0009618,2.21e-10,71;UBERON:0007524,2.89e-10,73;UBERON:0001013,1.56e-09,14;UBERON:0007503,1.60e-08,78;UBERON:0000486,2.78e-08,83;UBERON:0007100,2.72e-07,27;UBERON:0004872,3.72e-07,83;UBERON:0002199,3.88e-07,46;UBERON:0002416,3.88e-07,46|phase1_expression=31.0670028552652,13.06013195735,37.4938714895283,26.0190575718139,14.3027550216732,34.8935409640147,2.53299878168311,12.6343974685366,8.35794010239483,2.7030733015166,0.697801167972428,0,0,7.4259811776028,16.9012661621237,0.672325146451775,0,0,0,7.75662665883764,5.91602004608334,2.19418305034661,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,24.8159318090345,9.20610445273418,61.8060950577608,49.1311152423172,92.4120790970055,39.764297352555,91.0007207465929,1.41802225746102,1.10864698731282,1.66886092816939,9.49598297358417,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,21.0206649363202,30.4541115870403,178.699214726511,57.1016095339355,12.8955848032731,3.20246987189115,0.49333509683432,13.0708634867902,0,0.817309515567294,47.2235174252186,37.4514350911999,0.234321431833797,0.312160076830321,0,2.83952493048422,0.352303495931295,0.323745888736263,0.280901613404497,1.02077085627447,0.122834317311768,4.13303124703062,1.18800285728205,1.23633464639278,23.6641954103887,8.62341770179486,0.336672227908132,0.125118519871964,2.77064115484183,1.75591048352335,2.75839016219118,4.20666564938471,1.70148274740032,53.8168907066586,43.1385925413506,24.7960324356687,80.7245048467042,31.5340739469623,79.6109268740994,67.9326525610303,149.198277701279,76.8777970721857,40.8942714275465,28.7195683763974,52.2116763524762,80.5871775012715,23.1729825923573,5.59549954624609,0,0,0,0.121973706129595,0,0.464775771478074,0.621966330092223,0.252320850875628,0.36497735907583,21.9029345261742,86.1942857178466,6.90674606762403,15.7885095530873,7.94067429836544,0,0,0,0,0,0,0.134831308160164,0,0,0,0,7.81990621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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6133 | |||
|TSSclassifier=S | |||
|UniProt=O14498 | |||
|association_with_transcript=82bp_to_NM_005545,uc002axg.1_5end | |||
|coexpression_cluster_id=C1751 | |||
|description=CAGE_peak_4_at_ISLR_5end | |||
|id=chr15:74466169..74466212,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.17e-23!180;CL:0000057!1.02e-18!75;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000183!1.57e-10!59;CL:0000187!5.00e-10!54;CL:0002334!2.18e-09!12;CL:0002620!1.00e-08!23;CL:0000393!5.40e-08!60;CL:0000211!5.40e-08!60;CL:0000136!9.38e-08!15;CL:0000192!4.85e-07!42;CL:0000514!4.85e-07!42;CL:0000499!8.85e-07!27;CL:0000327!8.88e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.24e-10;12!CL:0000136;4.70e-07;13!CL:0002620;5.28e-07;23!CL:0000327;7.48e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.72e-16,76;CL:0002334,2.12e-10,12;CL:0000680,2.01e-09,58;CL:0000056,2.01e-09,58;CL:0000355,2.01e-09,58;CL:0000187,9.46e-09,55;CL:0000136,1.48e-08,15;CL:0002620,5.07e-07,23;CL:0000327,7.16e-07,15;CL:0000393,8.72e-07,61;CL:0000211,8.72e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.39e-17!115;UBERON:0000475!1.67e-15!365;UBERON:0000914!4.36e-13!83;UBERON:0002329!4.36e-13!83;UBERON:0003077!4.36e-13!83;UBERON:0003059!4.36e-13!83;UBERON:0007282!4.36e-13!83;UBERON:0009618!4.36e-13!83;UBERON:0007285!4.36e-13!83;UBERON:0004290!7.83e-13!70;UBERON:0002385!1.49e-12!63;UBERON:0001015!1.49e-12!63;UBERON:0000383!1.49e-12!63;UBERON:0001134!6.95e-12!61;UBERON:0002036!6.95e-12!61;UBERON:0003082!6.95e-12!61;UBERON:0000479!3.63e-10!787;UBERON:0000486!8.74e-10!82;UBERON:0000481!2.35e-09!347;UBERON:0000468!2.96e-09!659;UBERON:0001013!1.28e-08!14;UBERON:0000477!3.02e-08!286;UBERON:0007100!6.12e-08!27;UBERON:0002616!1.57e-07!59;UBERON:0000948!2.50e-07!24;UBERON:0005498!2.50e-07!24;UBERON:0004140!2.50e-07!24;UBERON:0009881!2.50e-07!24;UBERON:0004141!2.50e-07!24;UBERON:0003084!2.50e-07!24;UBERON:0007005!2.50e-07!24;UBERON:0004139!2.50e-07!24;UBERON:0004291!2.50e-07!24;UBERON:0002199!3.66e-07!45;UBERON:0002416!3.66e-07!45;UBERON:0005256!4.62e-07!143;UBERON:0004872!6.88e-07!84;UBERON:0000480!8.40e-07!626;UBERON:0000119!9.61e-07!312;UBERON:0003102!9.76e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.61e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.67e-13,114;UBERON:0000479,1.03e-11,773;UBERON:0002385,2.00e-11,64;UBERON:0001015,2.00e-11,64;UBERON:0000383,2.00e-11,64;UBERON:0001134,1.02e-10,62;UBERON:0002036,1.02e-10,62;UBERON:0003082,1.02e-10,62;UBERON:0003077,1.27e-10,72;UBERON:0007285,1.27e-10,72;UBERON:0002329,2.21e-10,71;UBERON:0003059,2.21e-10,71;UBERON:0007282,2.21e-10,71;UBERON:0004290,2.21e-10,71;UBERON:0009618,2.21e-10,71;UBERON:0007524,2.89e-10,73;UBERON:0001013,1.56e-09,14;UBERON:0007503,1.60e-08,78;UBERON:0000486,2.78e-08,83;UBERON:0007100,2.72e-07,27;UBERON:0004872,3.72e-07,83;UBERON:0002199,3.88e-07,46;UBERON:0002416,3.88e-07,46 | |||
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| |||
|short_description=p4@ISLR | |||
}} |
Revision as of 08:13, 11 September 2013
Short description: | p4@ISLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ISLR_5end |
Coexpression cluster: | C1751_Mesenchymal_Fibroblast_tenocyte_Smooth_Synoviocyte_Hair_Preadipocyte |
Association with transcript: | 82bp_to_NM_005545, uc002axg.1_5end |
EntrezGene: | ISLR |
HGNC: | 6133 |
UniProt: | O14498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.72e-16 | 76 |
preadipocyte | 2.12e-10 | 12 |
muscle precursor cell | 2.01e-09 | 58 |
myoblast | 2.01e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.01e-09 | 58 |
muscle cell | 9.46e-09 | 55 |
fat cell | 1.48e-08 | 15 |
skin fibroblast | 5.07e-07 | 23 |
extracellular matrix secreting cell | 7.16e-07 | 15 |
electrically responsive cell | 8.72e-07 | 61 |
electrically active cell | 8.72e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.67e-13 | 114 |
tissue | 1.03e-11 | 773 |
muscle tissue | 2.00e-11 | 64 |
musculature | 2.00e-11 | 64 |
musculature of body | 2.00e-11 | 64 |
skeletal muscle tissue | 1.02e-10 | 62 |
striated muscle tissue | 1.02e-10 | 62 |
myotome | 1.02e-10 | 62 |
paraxial mesoderm | 1.27e-10 | 72 |
presumptive paraxial mesoderm | 1.27e-10 | 72 |
somite | 2.21e-10 | 71 |
presomitic mesoderm | 2.21e-10 | 71 |
presumptive segmental plate | 2.21e-10 | 71 |
dermomyotome | 2.21e-10 | 71 |
trunk paraxial mesoderm | 2.21e-10 | 71 |
dense mesenchyme tissue | 2.89e-10 | 73 |
adipose tissue | 1.56e-09 | 14 |
epithelial vesicle | 1.60e-08 | 78 |
multilaminar epithelium | 2.78e-08 | 83 |
primary circulatory organ | 2.72e-07 | 27 |
splanchnic layer of lateral plate mesoderm | 3.72e-07 | 83 |
integument | 3.88e-07 | 46 |
integumental system | 3.88e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.