FFCP PHASE1:Hg19::chr15:89736241..89736275,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C514|description=CAGE_peak_at_chr15:89736241..89736275,+|id=chr15:89736241..89736275,+|ontology_enrichment_celltype=CL:0002139!1.30e-28!24;CL:0000071!2.23e-21!18;CL:0002546!2.23e-21!18;CL:0000115!2.85e-18!35;CL:0002078!1.10e-13!44;CL:0000222!1.29e-13!119;CL:0000213!1.41e-12!57;CL:0000215!1.41e-12!57;CL:1000413!2.09e-11!9;CL:0002539!1.21e-10!10;CL:0002144!1.81e-10!3;CL:0002618!5.08e-09!3;CL:0005020!8.74e-09!6;CL:0002138!8.74e-09!6;CL:0005022!8.74e-09!6;CL:0002544!2.64e-08!6;CL:0000359!1.39e-07!32;CL:0002545!3.55e-07!2|ontology_enrichment_celltype_v019=CL:0002144;8.14e-31;3!CL:0002139;4.78e-20;24!CL:0002138;3.78e-16;6!CL:0000115;1.43e-13;36!CL:0002078;1.35e-10;45!CL:0002539;1.58e-09;10!CL:0000071;3.82e-09;18!CL:0000359;2.41e-07;32|ontology_enrichment_celltype_v019_2=CL:0002144,9.03e-31,3;CL:0002139,5.54e-20,24;CL:0000115,6.34e-17,36;CL:0005020,3.88e-16,6;CL:0002138,3.88e-16,6;CL:0005022,3.88e-16,6;CL:0002078,2.36e-13,45;CL:0000222,6.24e-12,121;CL:0000213,3.79e-10,58;CL:0000215,3.79e-10,58;CL:0002539,1.67e-09,10;CL:0000071,4.20e-09,18;CL:0002546,4.20e-09,18;CL:0000359,1.25e-07,32|ontology_enrichment_development_v019=CL:0005022;3.78e-16;6!CL:0002546;3.82e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;1.30e-11;1|ontology_enrichment_disease_v019_2=DOID:2513,1.31e-11,1|ontology_enrichment_uberon=UBERON:0000055!5.60e-27!69;UBERON:0002049!1.42e-22!79;UBERON:0007798!1.42e-22!79;UBERON:0001981!1.82e-22!60;UBERON:0007500!1.82e-22!60;UBERON:0004537!1.82e-22!60;UBERON:0006965!1.82e-22!60;UBERON:0001986!2.23e-21!18;UBERON:0004638!2.23e-21!18;UBERON:0004852!2.23e-21!18;UBERON:0000487!5.79e-17!22;UBERON:0001637!1.72e-16!42;UBERON:0003509!1.72e-16!42;UBERON:0004572!1.72e-16!42;UBERON:0004872!1.40e-15!84;UBERON:0004535!2.64e-15!110;UBERON:0000947!2.74e-15!21;UBERON:0010191!2.74e-15!21;UBERON:0004573!1.02e-14!33;UBERON:0004571!1.02e-14!33;UBERON:0001009!1.07e-14!113;UBERON:0006914!1.38e-14!25;UBERON:0003915!2.09e-11!9;UBERON:0004700!2.09e-11!9;UBERON:0001917!2.09e-11!9;UBERON:0004237!1.21e-10!10;UBERON:0004695!1.21e-10!10;UBERON:0002111!1.21e-10!10;UBERON:0004178!1.21e-10!10;UBERON:0001915!1.81e-10!3;UBERON:0001982!1.81e-10!3;UBERON:0003914!2.84e-10!118;UBERON:0000490!7.85e-08!138;UBERON:0002465!1.86e-07!10;UBERON:0005800!3.55e-07!2;UBERON:0001515!3.55e-07!2;UBERON:0001135!7.84e-07!15|ontology_enrichment_uberon_v019=UBERON:0010523;8.14e-31;3!UBERON:0001915;8.14e-31;3!UBERON:0001982;8.14e-31;3!UBERON:0000055;1.29e-14;65!UBERON:0001473;2.96e-12;8!UBERON:0004536;2.96e-12;8!UBERON:0006558;2.96e-12;8!UBERON:0002465;6.58e-10;10!UBERON:0004237;1.58e-09;10!UBERON:0004695;1.58e-09;10!UBERON:0002111;1.58e-09;10!UBERON:0004178;1.58e-09;10!UBERON:0007500;2.03e-09;56!UBERON:0001981;2.03e-09;56!UBERON:0004537;2.03e-09;56!UBERON:0004638;3.82e-09;18!UBERON:0001986;3.82e-09;18!UBERON:0004852;3.82e-09;18!UBERON:0002049;2.36e-08;75!UBERON:0007798;2.36e-08;75!UBERON:0000947;8.95e-08;21!UBERON:0010191;8.95e-08;21!UBERON:0000487;1.64e-07;22!UBERON:0003914;6.84e-07;74|ontology_enrichment_uberon_v019_2=UBERON:0010523,9.03e-31,3;UBERON:0001915,9.03e-31,3;UBERON:0001982,9.03e-31,3;UBERON:0000055,2.29e-19,68;UBERON:0002049,1.18e-16,78;UBERON:0007798,1.18e-16,78;UBERON:0007500,2.02e-12,59;UBERON:0001981,2.02e-12,59;UBERON:0004537,2.02e-12,59;UBERON:0006965,2.02e-12,59;UBERON:0001473,3.02e-12,8;UBERON:0004536,3.02e-12,8;UBERON:0006558,3.02e-12,8;UBERON:0004535,2.14e-11,109;UBERON:0001009,4.84e-11,112;UBERON:0002465,6.68e-10,10;UBERON:0004237,1.67e-09,10;UBERON:0004695,1.67e-09,10;UBERON:0002111,1.67e-09,10;UBERON:0004178,1.67e-09,10;UBERON:0004638,4.20e-09,18;UBERON:0001986,4.20e-09,18;UBERON:0004852,4.20e-09,18;UBERON:0004872,1.75e-08,83;UBERON:0001637,4.75e-08,42;UBERON:0003509,4.75e-08,42;UBERON:0004572,4.75e-08,42;UBERON:0000947,9.89e-08,21;UBERON:0010191,9.89e-08,21;UBERON:0000487,1.78e-07,22;UBERON:0004573,2.18e-07,33;UBERON:0004571,2.18e-07,33;UBERON:0003914,5.07e-07,117|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22551502573691,0,0,0,0,0.390178042679635,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0,0.33472061276467,2.41697590265488,4.56163263431108,1.22031028774085,1.10298924103761,0.81014194788176,0.714397826272638,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C514 | |||
|description=CAGE_peak_at_chr15:89736241..89736275,+ | |||
|id=chr15:89736241..89736275,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.30e-28!24;CL:0000071!2.23e-21!18;CL:0002546!2.23e-21!18;CL:0000115!2.85e-18!35;CL:0002078!1.10e-13!44;CL:0000222!1.29e-13!119;CL:0000213!1.41e-12!57;CL:0000215!1.41e-12!57;CL:1000413!2.09e-11!9;CL:0002539!1.21e-10!10;CL:0002144!1.81e-10!3;CL:0002618!5.08e-09!3;CL:0005020!8.74e-09!6;CL:0002138!8.74e-09!6;CL:0005022!8.74e-09!6;CL:0002544!2.64e-08!6;CL:0000359!1.39e-07!32;CL:0002545!3.55e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002144;8.14e-31;3!CL:0002139;4.78e-20;24!CL:0002138;3.78e-16;6!CL:0000115;1.43e-13;36!CL:0002078;1.35e-10;45!CL:0002539;1.58e-09;10!CL:0000071;3.82e-09;18!CL:0000359;2.41e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,9.03e-31,3;CL:0002139,5.54e-20,24;CL:0000115,6.34e-17,36;CL:0005020,3.88e-16,6;CL:0002138,3.88e-16,6;CL:0005022,3.88e-16,6;CL:0002078,2.36e-13,45;CL:0000222,6.24e-12,121;CL:0000213,3.79e-10,58;CL:0000215,3.79e-10,58;CL:0002539,1.67e-09,10;CL:0000071,4.20e-09,18;CL:0002546,4.20e-09,18;CL:0000359,1.25e-07,32 | |||
|ontology_enrichment_development_v019=CL:0005022;3.78e-16;6!CL:0002546;3.82e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.30e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.31e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.60e-27!69;UBERON:0002049!1.42e-22!79;UBERON:0007798!1.42e-22!79;UBERON:0001981!1.82e-22!60;UBERON:0007500!1.82e-22!60;UBERON:0004537!1.82e-22!60;UBERON:0006965!1.82e-22!60;UBERON:0001986!2.23e-21!18;UBERON:0004638!2.23e-21!18;UBERON:0004852!2.23e-21!18;UBERON:0000487!5.79e-17!22;UBERON:0001637!1.72e-16!42;UBERON:0003509!1.72e-16!42;UBERON:0004572!1.72e-16!42;UBERON:0004872!1.40e-15!84;UBERON:0004535!2.64e-15!110;UBERON:0000947!2.74e-15!21;UBERON:0010191!2.74e-15!21;UBERON:0004573!1.02e-14!33;UBERON:0004571!1.02e-14!33;UBERON:0001009!1.07e-14!113;UBERON:0006914!1.38e-14!25;UBERON:0003915!2.09e-11!9;UBERON:0004700!2.09e-11!9;UBERON:0001917!2.09e-11!9;UBERON:0004237!1.21e-10!10;UBERON:0004695!1.21e-10!10;UBERON:0002111!1.21e-10!10;UBERON:0004178!1.21e-10!10;UBERON:0001915!1.81e-10!3;UBERON:0001982!1.81e-10!3;UBERON:0003914!2.84e-10!118;UBERON:0000490!7.85e-08!138;UBERON:0002465!1.86e-07!10;UBERON:0005800!3.55e-07!2;UBERON:0001515!3.55e-07!2;UBERON:0001135!7.84e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;8.14e-31;3!UBERON:0001915;8.14e-31;3!UBERON:0001982;8.14e-31;3!UBERON:0000055;1.29e-14;65!UBERON:0001473;2.96e-12;8!UBERON:0004536;2.96e-12;8!UBERON:0006558;2.96e-12;8!UBERON:0002465;6.58e-10;10!UBERON:0004237;1.58e-09;10!UBERON:0004695;1.58e-09;10!UBERON:0002111;1.58e-09;10!UBERON:0004178;1.58e-09;10!UBERON:0007500;2.03e-09;56!UBERON:0001981;2.03e-09;56!UBERON:0004537;2.03e-09;56!UBERON:0004638;3.82e-09;18!UBERON:0001986;3.82e-09;18!UBERON:0004852;3.82e-09;18!UBERON:0002049;2.36e-08;75!UBERON:0007798;2.36e-08;75!UBERON:0000947;8.95e-08;21!UBERON:0010191;8.95e-08;21!UBERON:0000487;1.64e-07;22!UBERON:0003914;6.84e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,9.03e-31,3;UBERON:0001915,9.03e-31,3;UBERON:0001982,9.03e-31,3;UBERON:0000055,2.29e-19,68;UBERON:0002049,1.18e-16,78;UBERON:0007798,1.18e-16,78;UBERON:0007500,2.02e-12,59;UBERON:0001981,2.02e-12,59;UBERON:0004537,2.02e-12,59;UBERON:0006965,2.02e-12,59;UBERON:0001473,3.02e-12,8;UBERON:0004536,3.02e-12,8;UBERON:0006558,3.02e-12,8;UBERON:0004535,2.14e-11,109;UBERON:0001009,4.84e-11,112;UBERON:0002465,6.68e-10,10;UBERON:0004237,1.67e-09,10;UBERON:0004695,1.67e-09,10;UBERON:0002111,1.67e-09,10;UBERON:0004178,1.67e-09,10;UBERON:0004638,4.20e-09,18;UBERON:0001986,4.20e-09,18;UBERON:0004852,4.20e-09,18;UBERON:0004872,1.75e-08,83;UBERON:0001637,4.75e-08,42;UBERON:0003509,4.75e-08,42;UBERON:0004572,4.75e-08,42;UBERON:0000947,9.89e-08,21;UBERON:0010191,9.89e-08,21;UBERON:0000487,1.78e-07,22;UBERON:0004573,2.18e-07,33;UBERON:0004571,2.18e-07,33;UBERON:0003914,5.07e-07,117 | |||
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|short_description=p@chr15:89736241..89736275,+ | |||
}} |
Revision as of 08:46, 11 September 2013
Short description: | p@chr15:89736241..89736275, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:89736241..89736275, + |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 9.03e-31 | 3 |
endothelial cell of vascular tree | 5.54e-20 | 24 |
endothelial cell | 6.34e-17 | 36 |
lymphangioblast | 3.88e-16 | 6 |
endothelial cell of lymphatic vessel | 3.88e-16 | 6 |
vascular lymphangioblast | 3.88e-16 | 6 |
meso-epithelial cell | 2.36e-13 | 45 |
mesodermal cell | 6.24e-12 | 121 |
lining cell | 3.79e-10 | 58 |
barrier cell | 3.79e-10 | 58 |
aortic smooth muscle cell | 1.67e-09 | 10 |
blood vessel endothelial cell | 4.20e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.20e-09 | 18 |
vascular associated smooth muscle cell | 1.25e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.31e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.