FFCP PHASE1:Hg19::chr17:76272689..76272696,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3032|description=CAGE_peak_at_chr17:76272689..76272696,+|id=chr17:76272689..76272696,+|ontology_enrichment_celltype=CL:0000945!9.17e-23!24;CL:0000826!9.17e-23!24;CL:0000542!4.05e-14!53;CL:0000051!4.05e-14!53;CL:0000838!4.43e-13!52;CL:0000988!3.59e-11!182;CL:0000037!1.59e-10!172;CL:0000566!1.59e-10!172;CL:0002032!3.26e-09!165;CL:0000837!3.26e-09!165;CL:0000236!3.35e-08!14;CL:0000451!6.32e-08!10;CL:0000817!5.10e-07!3;CL:0000784!6.66e-07!3|ontology_enrichment_celltype_v019=CL:0000945;2.87e-40;24!CL:0000784;2.86e-14;3!CL:0000236;1.84e-12;13!CL:0000946;8.62e-12;1!CL:0000786;8.62e-12;1!CL:0000785;1.37e-11;1!CL:0000819;1.37e-11;1!CL:0000542;1.88e-10;53!CL:0000451;7.88e-09;10|ontology_enrichment_celltype_v019_2=CL:0000945,1.98e-40,24;CL:0000826,1.98e-40,24;CL:0000785,1.25e-21,2;CL:0000955,1.25e-21,2;CL:0000818,1.25e-21,2;CL:0000954,1.25e-21,2;CL:0000816,1.25e-21,2;CL:0000838,6.10e-18,52;CL:0000236,7.86e-18,14;CL:0000542,1.41e-17,53;CL:0000051,1.41e-17,53;CL:0000817,9.39e-15,3;CL:0000784,1.98e-14,3;CL:0000037,9.71e-13,168;CL:0000988,5.72e-12,177;CL:0000946,8.62e-12,1;CL:0000786,8.62e-12,1;CL:0000980,8.62e-12,1;CL:0000819,1.31e-11,1;CL:0000738,1.99e-10,136;CL:0002032,6.38e-10,161;CL:0000837,6.38e-10,161;CL:0000451,6.80e-09,10;CL:0002031,1.91e-08,120;CL:0002087,3.00e-07,115|ontology_enrichment_development_v019=CL:0000954;1.31e-21;2!CL:0000051;1.88e-10;53|ontology_enrichment_disease=DOID:2531!6.19e-13!51;DOID:0060083!6.19e-13!51;DOID:0050686!2.25e-09!137;DOID:0060058!9.06e-09!10;DOID:1036!5.68e-08!8;DOID:162!8.31e-07!235;DOID:1240!8.81e-07!39|ontology_enrichment_disease_v019=DOID:0060058;4.25e-25;10!DOID:0060073;1.37e-11;1!DOID:8675;1.37e-11;1!DOID:2355;3.45e-11;1!DOID:2531;7.48e-07;51!DOID:0060083;7.48e-07;51|ontology_enrichment_disease_v019_2=DOID:0060058,3.15e-25,10;DOID:0060073,1.31e-11,1;DOID:8675,1.31e-11,1;DOID:2531,1.53e-11,51;DOID:0060083,1.53e-11,51;DOID:2355,2.18e-11,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.305653622991805,0.246301768349837,0.236132343941038,0,0,0,0,0,0,3.40855682553327,8.38798471675787,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,1.32208974556972,0.954053754535364,0,1.17447437874188,1.14681968437569,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,2.85997455390064,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0.743212700502875,0.577076851905779,0,0.159426272728822,0,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0.828851746593443,0,0,3.69254416383208,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,1.1279783030859,0.588187602953219,1.00692952185506,0.75901493089674,0.158936578980379,0.421996129056054,0,0.282706142867882,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,3.64909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0.343609788497747,0.171594997861965,0,0,0,0.407712618220842,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,1.6087933092499,0,0,0.160753148465019,0,0,0.449947783103001,5.41661368190565,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0.992332043623902,3.557009374163,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3032 | |||
|description=CAGE_peak_at_chr17:76272689..76272696,+ | |||
|id=chr17:76272689..76272696,+ | |||
|ontology_enrichment_celltype=CL:0000945!9.17e-23!24;CL:0000826!9.17e-23!24;CL:0000542!4.05e-14!53;CL:0000051!4.05e-14!53;CL:0000838!4.43e-13!52;CL:0000988!3.59e-11!182;CL:0000037!1.59e-10!172;CL:0000566!1.59e-10!172;CL:0002032!3.26e-09!165;CL:0000837!3.26e-09!165;CL:0000236!3.35e-08!14;CL:0000451!6.32e-08!10;CL:0000817!5.10e-07!3;CL:0000784!6.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.87e-40;24!CL:0000784;2.86e-14;3!CL:0000236;1.84e-12;13!CL:0000946;8.62e-12;1!CL:0000786;8.62e-12;1!CL:0000785;1.37e-11;1!CL:0000819;1.37e-11;1!CL:0000542;1.88e-10;53!CL:0000451;7.88e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.98e-40,24;CL:0000826,1.98e-40,24;CL:0000785,1.25e-21,2;CL:0000955,1.25e-21,2;CL:0000818,1.25e-21,2;CL:0000954,1.25e-21,2;CL:0000816,1.25e-21,2;CL:0000838,6.10e-18,52;CL:0000236,7.86e-18,14;CL:0000542,1.41e-17,53;CL:0000051,1.41e-17,53;CL:0000817,9.39e-15,3;CL:0000784,1.98e-14,3;CL:0000037,9.71e-13,168;CL:0000988,5.72e-12,177;CL:0000946,8.62e-12,1;CL:0000786,8.62e-12,1;CL:0000980,8.62e-12,1;CL:0000819,1.31e-11,1;CL:0000738,1.99e-10,136;CL:0002032,6.38e-10,161;CL:0000837,6.38e-10,161;CL:0000451,6.80e-09,10;CL:0002031,1.91e-08,120;CL:0002087,3.00e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000954;1.31e-21;2!CL:0000051;1.88e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!6.19e-13!51;DOID:0060083!6.19e-13!51;DOID:0050686!2.25e-09!137;DOID:0060058!9.06e-09!10;DOID:1036!5.68e-08!8;DOID:162!8.31e-07!235;DOID:1240!8.81e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.25e-25;10!DOID:0060073;1.37e-11;1!DOID:8675;1.37e-11;1!DOID:2355;3.45e-11;1!DOID:2531;7.48e-07;51!DOID:0060083;7.48e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.15e-25,10;DOID:0060073,1.31e-11,1;DOID:8675,1.31e-11,1;DOID:2531,1.53e-11,51;DOID:0060083,1.53e-11,51;DOID:2355,2.18e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.305653622991805,0.246301768349837,0.236132343941038,0,0,0,0,0,0,3.40855682553327,8.38798471675787,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,1.32208974556972,0.954053754535364,0,1.17447437874188,1.14681968437569,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,2.85997455390064,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0.743212700502875,0.577076851905779,0,0.159426272728822,0,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0.828851746593443,0,0,3.69254416383208,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,1.1279783030859,0.588187602953219,1.00692952185506,0.75901493089674,0.158936578980379,0.421996129056054,0,0.282706142867882,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,3.64909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0.343609788497747,0.171594997861965,0,0,0,0.407712618220842,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,1.6087933092499,0,0,0.160753148465019,0,0,0.449947783103001,5.41661368190565,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0.992332043623902,3.557009374163,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.654261577023377,0,0,0,0,0.106691729694141,0.861074898304078,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,13.7128445191377,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0.581207126840626,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.335566295393377,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.459474497674225,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.775066918032073,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr17:76272689..76272696,+ | |||
}} |
Revision as of 16:02, 11 September 2013
Short description: | p@chr17:76272689..76272696, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:76272689..76272696, + |
Coexpression cluster: | C3032_plasma_Burkitt_diffuse_immature_lymphangiectasia_b_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.98e-40 | 24 |
pro-B cell | 1.98e-40 | 24 |
mature B cell | 1.25e-21 | 2 |
pre-B-II cell | 1.25e-21 | 2 |
transitional stage B cell | 1.25e-21 | 2 |
small pre-B-II cell | 1.25e-21 | 2 |
immature B cell | 1.25e-21 | 2 |
lymphoid lineage restricted progenitor cell | 6.10e-18 | 52 |
B cell | 7.86e-18 | 14 |
lymphocyte | 1.41e-17 | 53 |
common lymphoid progenitor | 1.41e-17 | 53 |
precursor B cell | 9.39e-15 | 3 |
plasmacytoid dendritic cell | 1.98e-14 | 3 |
hematopoietic stem cell | 9.71e-13 | 168 |
hematopoietic cell | 5.72e-12 | 177 |
antibody secreting cell | 8.62e-12 | 1 |
plasma cell | 8.62e-12 | 1 |
plasmablast | 8.62e-12 | 1 |
B-1 B cell | 1.31e-11 | 1 |
leukocyte | 1.99e-10 | 136 |
hematopoietic oligopotent progenitor cell | 6.38e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.38e-10 | 161 |
dendritic cell | 6.80e-09 | 10 |
hematopoietic lineage restricted progenitor cell | 1.91e-08 | 120 |
nongranular leukocyte | 3.00e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.15e-25 | 10 |
lymphatic system cancer | 1.31e-11 | 1 |
lymphosarcoma | 1.31e-11 | 1 |
hematologic cancer | 1.53e-11 | 51 |
immune system cancer | 1.53e-11 | 51 |
anemia | 2.18e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.