FFCP PHASE1:Hg19::chr17:8065592..8065610,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6844|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12643|TSSclassifier=S|UniProt=P63027|association_with_transcript=76bp_to_AJ225044,HQ448696_5end|description=CAGE_peak_15_at_VAMP2_5end|id=chr17:8065592..8065610,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;3.90e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.27e-29!115;UBERON:0001049!6.53e-22!57;UBERON:0005068!6.53e-22!57;UBERON:0006241!6.53e-22!57;UBERON:0007135!6.53e-22!57;UBERON:0002616!5.90e-19!59;UBERON:0002346!1.19e-18!90;UBERON:0002780!1.94e-17!41;UBERON:0001890!1.94e-17!41;UBERON:0006240!1.94e-17!41;UBERON:0001017!2.46e-17!82;UBERON:0005743!3.66e-17!86;UBERON:0003075!4.09e-17!86;UBERON:0007284!4.09e-17!86;UBERON:0000955!5.75e-17!69;UBERON:0006238!5.75e-17!69;UBERON:0000073!6.38e-17!94;UBERON:0001016!6.38e-17!94;UBERON:0003080!1.12e-16!42;UBERON:0002619!3.40e-15!22;UBERON:0001869!1.86e-14!32;UBERON:0001893!2.60e-14!34;UBERON:0002020!3.56e-14!34;UBERON:0003528!3.56e-14!34;UBERON:0001950!1.03e-13!20;UBERON:0002791!1.36e-13!33;UBERON:0000956!2.57e-12!25;UBERON:0000203!2.57e-12!25;UBERON:0003056!6.40e-12!61;UBERON:0000153!1.40e-08!129;UBERON:0007811!1.40e-08!129;UBERON:0000924!5.30e-08!173;UBERON:0006601!5.30e-08!173;UBERON:0000033!8.75e-08!123;UBERON:0004121!4.28e-07!169|ontology_enrichment_uberon_v019=UBERON:0002619;4.87e-32;22!UBERON:0001950;1.72e-30;20!UBERON:0000956;5.81e-28;25!UBERON:0000203;5.81e-28;25!UBERON:0001869;3.25e-22;32!UBERON:0001893;8.67e-21;34!UBERON:0002791;5.25e-19;32!UBERON:0003528;1.69e-17;34!UBERON:0002020;1.69e-17;34!UBERON:0000200;3.12e-17;6!UBERON:0002780;2.19e-16;41!UBERON:0001890;2.19e-16;41!UBERON:0001871;9.87e-15;6!UBERON:0000073;1.91e-14;53!UBERON:0002616;1.91e-14;53!UBERON:0004151;4.75e-13;3!UBERON:0000955;2.62e-12;68!UBERON:0001017;1.05e-11;75!UBERON:0001016;1.04e-10;83!UBERON:0002771;2.04e-09;2!UBERON:0002081;5.71e-09;2!UBERON:0007023;5.79e-09;114!UBERON:0002021;4.93e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.60e-32,22;UBERON:0001950,7.52e-31,20;UBERON:0007023,1.14e-29,114;UBERON:0001049,1.36e-29,56;UBERON:0005068,1.36e-29,56;UBERON:0006241,1.36e-29,56;UBERON:0007135,1.36e-29,56;UBERON:0000956,2.19e-28,25;UBERON:0000203,2.19e-28,25;UBERON:0000073,8.78e-26,53;UBERON:0002616,8.78e-26,53;UBERON:0001869,6.26e-25,32;UBERON:0002780,1.46e-24,41;UBERON:0001890,1.46e-24,41;UBERON:0003080,1.46e-24,41;UBERON:0006240,1.46e-24,41;UBERON:0001893,2.67e-23,34;UBERON:0003075,9.51e-23,82;UBERON:0007284,9.51e-23,82;UBERON:0001017,1.06e-22,81;UBERON:0001016,6.32e-22,89;UBERON:0002791,1.15e-21,32;UBERON:0002346,1.98e-21,86;UBERON:0000955,5.00e-21,68;UBERON:0006238,5.00e-21,68;UBERON:0003528,3.08e-20,34;UBERON:0002020,3.08e-20,34;UBERON:0010371,1.98e-18,104;UBERON:0010314,1.17e-17,132;UBERON:0003056,1.98e-17,61;UBERON:0000200,3.57e-17,6;UBERON:0001871,7.84e-15,6;UBERON:0004151,3.00e-13,3;UBERON:0000025,6.48e-11,192;UBERON:0004121,9.06e-11,171;UBERON:0000924,9.06e-11,171;UBERON:0006601,9.06e-11,171;UBERON:0011216,4.26e-10,223;UBERON:0002771,3.38e-09,2;UBERON:0002081,3.83e-09,2;UBERON:0010227,3.83e-09,2;UBERON:0004111,3.05e-08,240;UBERON:0002021,3.49e-08,5|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0.436882744260345,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0.0787107813136792,0,0.767658796194425,0.154816123316076,0,0.90361775633475,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0.209658645508376,0.22465726229299,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0.393419540227666,0.786021525498329,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0,0,0.444859689486181,0,0,0.113309342697566,0.766440987203842,1.03088233644789,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.327447688744282,0,0.370784442784429,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,1.68203280042692,0,0,0,0.269421344139376,0,0.454072282934794,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12643 | |||
|TSSclassifier=S | |||
|UniProt=P63027 | |||
|association_with_transcript=76bp_to_AJ225044,HQ448696_5end | |||
|description=CAGE_peak_15_at_VAMP2_5end | |||
|id=chr17:8065592..8065610,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.90e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.27e-29!115;UBERON:0001049!6.53e-22!57;UBERON:0005068!6.53e-22!57;UBERON:0006241!6.53e-22!57;UBERON:0007135!6.53e-22!57;UBERON:0002616!5.90e-19!59;UBERON:0002346!1.19e-18!90;UBERON:0002780!1.94e-17!41;UBERON:0001890!1.94e-17!41;UBERON:0006240!1.94e-17!41;UBERON:0001017!2.46e-17!82;UBERON:0005743!3.66e-17!86;UBERON:0003075!4.09e-17!86;UBERON:0007284!4.09e-17!86;UBERON:0000955!5.75e-17!69;UBERON:0006238!5.75e-17!69;UBERON:0000073!6.38e-17!94;UBERON:0001016!6.38e-17!94;UBERON:0003080!1.12e-16!42;UBERON:0002619!3.40e-15!22;UBERON:0001869!1.86e-14!32;UBERON:0001893!2.60e-14!34;UBERON:0002020!3.56e-14!34;UBERON:0003528!3.56e-14!34;UBERON:0001950!1.03e-13!20;UBERON:0002791!1.36e-13!33;UBERON:0000956!2.57e-12!25;UBERON:0000203!2.57e-12!25;UBERON:0003056!6.40e-12!61;UBERON:0000153!1.40e-08!129;UBERON:0007811!1.40e-08!129;UBERON:0000924!5.30e-08!173;UBERON:0006601!5.30e-08!173;UBERON:0000033!8.75e-08!123;UBERON:0004121!4.28e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.87e-32;22!UBERON:0001950;1.72e-30;20!UBERON:0000956;5.81e-28;25!UBERON:0000203;5.81e-28;25!UBERON:0001869;3.25e-22;32!UBERON:0001893;8.67e-21;34!UBERON:0002791;5.25e-19;32!UBERON:0003528;1.69e-17;34!UBERON:0002020;1.69e-17;34!UBERON:0000200;3.12e-17;6!UBERON:0002780;2.19e-16;41!UBERON:0001890;2.19e-16;41!UBERON:0001871;9.87e-15;6!UBERON:0000073;1.91e-14;53!UBERON:0002616;1.91e-14;53!UBERON:0004151;4.75e-13;3!UBERON:0000955;2.62e-12;68!UBERON:0001017;1.05e-11;75!UBERON:0001016;1.04e-10;83!UBERON:0002771;2.04e-09;2!UBERON:0002081;5.71e-09;2!UBERON:0007023;5.79e-09;114!UBERON:0002021;4.93e-08;5 | |||
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| |||
|short_description=p15@VAMP2 | |||
}} |
Revision as of 16:38, 11 September 2013
Short description: | p15@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_VAMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_AJ225044, HQ448696_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | P63027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.