FFCP PHASE1:Hg19::chr18:61570712..61570743,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr18:61570712..61570743,+|id=chr18:61570712..61570743,+|ontology_enrichment_celltype=CL:0002057!1.33e-35!42;CL:0000860!1.29e-32!45;CL:0002194!3.32e-29!63;CL:0000576!3.32e-29!63;CL:0000040!3.32e-29!63;CL:0000559!3.32e-29!63;CL:0002009!5.28e-28!65;CL:0000766!1.94e-27!76;CL:0000839!2.66e-25!70;CL:0000557!8.31e-25!71;CL:0000763!2.27e-17!112;CL:0000049!2.27e-17!112;CL:0002087!5.02e-11!119;CL:0000738!2.86e-10!140;CL:0002031!3.14e-10!124;CL:0002032!1.50e-08!165;CL:0000837!1.50e-08!165;CL:0000037!7.96e-08!172;CL:0000566!7.96e-08!172;CL:0000988!6.67e-07!182|ontology_enrichment_celltype_v019=CL:0000860;1.39e-76;33!CL:0002057;1.39e-76;33!CL:0000473;6.20e-59;39!CL:0000234;6.20e-59;39!CL:0000576;1.46e-34;48!CL:0000766;1.55e-22;69!CL:0000763;1.36e-12;100!CL:0002087;1.98e-10;104!CL:0000219;9.15e-08;193|ontology_enrichment_celltype_v019_2=CL:0000860,9.06e-67,42;CL:0002057,9.06e-67,42;CL:0000473,2.03e-63,48;CL:0000234,2.03e-63,48;CL:0002194,2.60e-54,59;CL:0000576,2.60e-54,59;CL:0000040,2.60e-54,59;CL:0000559,2.60e-54,59;CL:0002009,2.09e-52,61;CL:0000839,3.85e-48,66;CL:0000557,2.31e-47,67;CL:0000766,8.60e-44,72;CL:0000763,9.69e-28,108;CL:0000049,9.69e-28,108;CL:0002087,8.96e-26,115;CL:0002031,1.65e-24,120;CL:0000738,4.44e-21,136;CL:0002032,4.49e-17,161;CL:0000837,4.49e-17,161;CL:0000037,3.65e-16,168;CL:0000988,4.23e-15,177;CL:0000134,4.16e-09,354;CL:0002320,8.02e-09,361;CL:0000219,8.14e-08,386|ontology_enrichment_development_v019=CL:0002057;5.43e-49;42!CL:0000049;3.18e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;2.07e-07;1!DOID:0060085;3.51e-07;1!DOID:3165;3.51e-07;1!DOID:0060121;3.51e-07;1!DOID:2438;3.51e-07;1!DOID:4418;3.51e-07;1|ontology_enrichment_disease_v019_2=DOID:2513,2.07e-07,1;DOID:0060085,4.90e-07,1;DOID:3165,4.90e-07,1;DOID:0060121,4.90e-07,1;DOID:2438,4.90e-07,1;DOID:4418,4.90e-07,1|ontology_enrichment_uberon=UBERON:0002371!6.40e-21!80;UBERON:0001474!3.47e-20!86;UBERON:0004765!9.78e-16!101;UBERON:0001434!9.78e-16!101;UBERON:0002390!2.29e-14!102;UBERON:0003061!2.29e-14!102;UBERON:0002193!3.79e-13!112;UBERON:0002405!1.46e-12!115;UBERON:0002204!1.68e-10!167;UBERON:0003081!1.16e-08!216|ontology_enrichment_uberon_v019=UBERON:0000014;6.95e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.87e-41,76;UBERON:0001474,6.13e-38,82;UBERON:0004765,3.51e-34,90;UBERON:0002405,6.16e-33,93;UBERON:0002390,4.97e-31,98;UBERON:0003061,4.97e-31,98;UBERON:0001434,2.55e-30,100;UBERON:0002193,9.69e-28,108;UBERON:0003081,1.01e-16,203;UBERON:0002204,2.73e-16,167;UBERON:0000926,7.10e-10,315;UBERON:0004120,7.10e-10,315;UBERON:0006603,7.10e-10,315;UBERON:0002384,1.97e-08,371;UBERON:0000014,8.19e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.436194716338694,0.377875943688809,0,1.62700325833979,1.6446715520873,2.16794459626573,16.3984663623626,1.7931249457037,5.67557351732605,8.61864201841546,2.5819387343353,4.06279459783025,0.752969358170419,0,0.898893937780338,7.34601341690166,2.88836124368484,10.8687311385837,1.9791078011203,0.997318288108159,0,7.2552309657146,10.2129340444405,12.4564449799115,5.02497330513487,1.5644487552606,3.25783267057675,5.44859552370032,5.15588690382591,13.607882659958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,1.58891016975863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.703702806881416,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,1.49959486773086,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,1.84296421259539,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr18:61570712..61570743,+ | |||
|id=chr18:61570712..61570743,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.33e-35!42;CL:0000860!1.29e-32!45;CL:0002194!3.32e-29!63;CL:0000576!3.32e-29!63;CL:0000040!3.32e-29!63;CL:0000559!3.32e-29!63;CL:0002009!5.28e-28!65;CL:0000766!1.94e-27!76;CL:0000839!2.66e-25!70;CL:0000557!8.31e-25!71;CL:0000763!2.27e-17!112;CL:0000049!2.27e-17!112;CL:0002087!5.02e-11!119;CL:0000738!2.86e-10!140;CL:0002031!3.14e-10!124;CL:0002032!1.50e-08!165;CL:0000837!1.50e-08!165;CL:0000037!7.96e-08!172;CL:0000566!7.96e-08!172;CL:0000988!6.67e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-76;33!CL:0002057;1.39e-76;33!CL:0000473;6.20e-59;39!CL:0000234;6.20e-59;39!CL:0000576;1.46e-34;48!CL:0000766;1.55e-22;69!CL:0000763;1.36e-12;100!CL:0002087;1.98e-10;104!CL:0000219;9.15e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.06e-67,42;CL:0002057,9.06e-67,42;CL:0000473,2.03e-63,48;CL:0000234,2.03e-63,48;CL:0002194,2.60e-54,59;CL:0000576,2.60e-54,59;CL:0000040,2.60e-54,59;CL:0000559,2.60e-54,59;CL:0002009,2.09e-52,61;CL:0000839,3.85e-48,66;CL:0000557,2.31e-47,67;CL:0000766,8.60e-44,72;CL:0000763,9.69e-28,108;CL:0000049,9.69e-28,108;CL:0002087,8.96e-26,115;CL:0002031,1.65e-24,120;CL:0000738,4.44e-21,136;CL:0002032,4.49e-17,161;CL:0000837,4.49e-17,161;CL:0000037,3.65e-16,168;CL:0000988,4.23e-15,177;CL:0000134,4.16e-09,354;CL:0002320,8.02e-09,361;CL:0000219,8.14e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.43e-49;42!CL:0000049;3.18e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.07e-07;1!DOID:0060085;3.51e-07;1!DOID:3165;3.51e-07;1!DOID:0060121;3.51e-07;1!DOID:2438;3.51e-07;1!DOID:4418;3.51e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.07e-07,1;DOID:0060085,4.90e-07,1;DOID:3165,4.90e-07,1;DOID:0060121,4.90e-07,1;DOID:2438,4.90e-07,1;DOID:4418,4.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.40e-21!80;UBERON:0001474!3.47e-20!86;UBERON:0004765!9.78e-16!101;UBERON:0001434!9.78e-16!101;UBERON:0002390!2.29e-14!102;UBERON:0003061!2.29e-14!102;UBERON:0002193!3.79e-13!112;UBERON:0002405!1.46e-12!115;UBERON:0002204!1.68e-10!167;UBERON:0003081!1.16e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;6.95e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.87e-41,76;UBERON:0001474,6.13e-38,82;UBERON:0004765,3.51e-34,90;UBERON:0002405,6.16e-33,93;UBERON:0002390,4.97e-31,98;UBERON:0003061,4.97e-31,98;UBERON:0001434,2.55e-30,100;UBERON:0002193,9.69e-28,108;UBERON:0003081,1.01e-16,203;UBERON:0002204,2.73e-16,167;UBERON:0000926,7.10e-10,315;UBERON:0004120,7.10e-10,315;UBERON:0006603,7.10e-10,315;UBERON:0002384,1.97e-08,371;UBERON:0000014,8.19e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.436194716338694,0.377875943688809,0,1.62700325833979,1.6446715520873,2.16794459626573,16.3984663623626,1.7931249457037,5.67557351732605,8.61864201841546,2.5819387343353,4.06279459783025,0.752969358170419,0,0.898893937780338,7.34601341690166,2.88836124368484,10.8687311385837,1.9791078011203,0.997318288108159,0,7.2552309657146,10.2129340444405,12.4564449799115,5.02497330513487,1.5644487552606,3.25783267057675,5.44859552370032,5.15588690382591,13.607882659958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,1.58891016975863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.703702806881416,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,1.49959486773086,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,1.84296421259539,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.261177619741208,0,0,0,0,0,0.290967049465258,0.529536760149002,0,0,1.19228767021794,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0.751288044986092,7.61610424337591,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0.368211900503681,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:61570712..61570743,+ | |||
}} |
Revision as of 18:02, 11 September 2013
Short description: | p@chr18:61570712..61570743, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:61570712..61570743, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.06e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.06e-67 | 42 |
defensive cell | 2.03e-63 | 48 |
phagocyte | 2.03e-63 | 48 |
monopoietic cell | 2.60e-54 | 59 |
monocyte | 2.60e-54 | 59 |
monoblast | 2.60e-54 | 59 |
promonocyte | 2.60e-54 | 59 |
macrophage dendritic cell progenitor | 2.09e-52 | 61 |
myeloid lineage restricted progenitor cell | 3.85e-48 | 66 |
granulocyte monocyte progenitor cell | 2.31e-47 | 67 |
myeloid leukocyte | 8.60e-44 | 72 |
myeloid cell | 9.69e-28 | 108 |
common myeloid progenitor | 9.69e-28 | 108 |
nongranular leukocyte | 8.96e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.65e-24 | 120 |
leukocyte | 4.44e-21 | 136 |
hematopoietic oligopotent progenitor cell | 4.49e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-17 | 161 |
hematopoietic stem cell | 3.65e-16 | 168 |
hematopoietic cell | 4.23e-15 | 177 |
mesenchymal cell | 4.16e-09 | 354 |
connective tissue cell | 8.02e-09 | 361 |
motile cell | 8.14e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.87e-41 | 76 |
bone element | 6.13e-38 | 82 |
skeletal element | 3.51e-34 | 90 |
immune system | 6.16e-33 | 93 |
hematopoietic system | 4.97e-31 | 98 |
blood island | 4.97e-31 | 98 |
skeletal system | 2.55e-30 | 100 |
hemolymphoid system | 9.69e-28 | 108 |
lateral plate mesoderm | 1.01e-16 | 203 |
musculoskeletal system | 2.73e-16 | 167 |
mesoderm | 7.10e-10 | 315 |
mesoderm-derived structure | 7.10e-10 | 315 |
presumptive mesoderm | 7.10e-10 | 315 |
connective tissue | 1.97e-08 | 371 |
zone of skin | 8.19e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.07e-07 | 1 |
organ system benign neoplasm | 4.90e-07 | 1 |
skin benign neoplasm | 4.90e-07 | 1 |
integumentary system benign neoplasm | 4.90e-07 | 1 |
dermis tumor | 4.90e-07 | 1 |
cutaneous fibrous histiocytoma | 4.90e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.