FFCP PHASE1:Hg19::chr18:9475057..9475066,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10928|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9841|TSSclassifier=S|UniProt=Q15311|association_with_transcript=50bp_to_ENST00000019317,uc002kob.2_5end|coexpression_cluster_id=C3744|description=CAGE_peak_9_at_RALBP1_5end|id=chr18:9475057..9475066,+|ontology_enrichment_celltype=CL:0002076!4.59e-16!43;CL:0000066!6.57e-16!254;CL:0002251!1.31e-11!21;CL:0000223!1.62e-11!59;CL:0002159!2.52e-08!13|ontology_enrichment_celltype_v019=CL:0000349;2.10e-12;19!CL:0000622;1.94e-09;5!CL:0002076;2.05e-09;42!CL:0002541;5.69e-09;3!CL:0002577;3.94e-08;3!CL:0002231;3.94e-08;3!CL:0000154;7.43e-08;6!CL:0000317;8.09e-07;2!CL:1000448;8.09e-07;2!CL:0002308;8.09e-07;2!CL:0002140;8.09e-07;2|ontology_enrichment_celltype_v019_2=CL:0000349,1.91e-12,19;CL:0000066,1.23e-10,253;CL:0002076,1.32e-10,42;CL:0000622,3.04e-09,5;CL:0002541,5.20e-09,3;CL:0002577,4.01e-08,3;CL:0002231,6.04e-08,3;CL:0000223,6.76e-08,58;CL:0000154,1.07e-07,6;CL:0000317,9.62e-07,2;CL:1000448,9.62e-07,2;CL:0002308,9.62e-07,2;CL:0002140,9.62e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!8.29e-13!106;DOID:1749!5.95e-12!14;DOID:0050687!4.70e-10!143|ontology_enrichment_disease_v019=DOID:1749;5.24e-14;14|ontology_enrichment_disease_v019_2=DOID:1749,7.51e-14,14;DOID:305,2.18e-08,106;DOID:0050687,1.89e-07,143|ontology_enrichment_uberon=UBERON:0004119!3.17e-20!169;UBERON:0000925!3.17e-20!169;UBERON:0006595!3.17e-20!169;UBERON:0001007!4.32e-16!155;UBERON:0001555!4.32e-16!155;UBERON:0007026!4.32e-16!155;UBERON:0000077!6.00e-16!130;UBERON:0000161!1.28e-13!35;UBERON:0004921!1.57e-12!129;UBERON:0004185!1.57e-12!129;UBERON:0001004!8.17e-11!72;UBERON:0005631!2.00e-10!14;UBERON:0000158!2.00e-10!14;UBERON:0001046!1.51e-09!19;UBERON:0003102!3.84e-09!95;UBERON:0000162!6.70e-09!14;UBERON:0001353!6.70e-09!14;UBERON:0000163!6.70e-09!14;UBERON:0006866!6.70e-09!14;UBERON:0000164!6.70e-09!14;UBERON:0000931!6.70e-09!14;UBERON:0003124!3.02e-08!7;UBERON:0004122!4.63e-08!15;UBERON:0000065!6.18e-08!53;UBERON:0003937!9.90e-08!12;UBERON:0005399!9.90e-08!12;UBERON:0000062!2.11e-07!511;UBERON:0005156!3.61e-07!59;UBERON:0000990!3.61e-07!59;UBERON:0003101!5.70e-07!22;UBERON:0000079!5.70e-07!22;UBERON:0001041!8.11e-07!98;UBERON:0002367!9.47e-07!11;UBERON:0010147!9.47e-07!11;UBERON:0009846!9.47e-07!11;UBERON:0003353!9.47e-07!11;UBERON:0004902!9.47e-07!11;UBERON:0003820!9.47e-07!11;UBERON:0009847!9.47e-07!11;UBERON:0005153!9.97e-07!37|ontology_enrichment_uberon_v019=UBERON:0000478;6.95e-14;24!UBERON:0005631;4.96e-13;10!UBERON:0000158;4.96e-13;10!UBERON:0001987;8.53e-11;4!UBERON:0003124;5.69e-09;3!UBERON:0000920;5.69e-09;3!UBERON:0002419;8.09e-07;2!UBERON:0007771;8.09e-07;2!UBERON:0003297;8.09e-07;2!UBERON:0001821;8.09e-07;2!UBERON:0003487;8.09e-07;2!UBERON:0001820;8.09e-07;2!UBERON:0000305;9.57e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.28e-21,14;UBERON:0000158,1.28e-21,14;UBERON:0003124,5.01e-18,7;UBERON:0000478,7.01e-14,24;UBERON:0000995,6.31e-11,21;UBERON:0004175,6.53e-11,25;UBERON:0001987,1.00e-10,4;UBERON:0004340,1.00e-10,4;UBERON:0005795,2.46e-10,22;UBERON:0003975,2.46e-10,22;UBERON:0000920,5.20e-09,3;UBERON:0005156,6.90e-09,59;UBERON:0000990,6.90e-09,59;UBERON:0000161,3.45e-08,36;UBERON:0004119,5.50e-08,160;UBERON:0000925,5.50e-08,160;UBERON:0006595,5.50e-08,160;UBERON:0000305,8.91e-07,7;UBERON:0004923,9.32e-07,66;UBERON:0002419,9.62e-07,2;UBERON:0007771,9.62e-07,2;UBERON:0003297,9.62e-07,2;UBERON:0001821,9.62e-07,2;UBERON:0003487,9.62e-07,2;UBERON:0001820,9.62e-07,2;UBERON:0005089,9.62e-07,2;UBERON:0005088,9.62e-07,2|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,2.83973783769224,1.31883489114227,0,0,0.672325146451775,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,2.22470665670658,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0.966304265816484,1.90922284413584,0.860413786167011,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0.723033089650446,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,3.19769940212095,0,1.86575485194663,2.24803506515239,0.301586917234893,0.740707561268237,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.503946384596579,0.850650583454319,0.626909658919938,0.290633938513962,0,0,0,0,0.144119953416961,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9841 | |||
|TSSclassifier=S | |||
|UniProt=Q15311 | |||
|association_with_transcript=50bp_to_ENST00000019317,uc002kob.2_5end | |||
|coexpression_cluster_id=C3744 | |||
|description=CAGE_peak_9_at_RALBP1_5end | |||
|id=chr18:9475057..9475066,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.59e-16!43;CL:0000066!6.57e-16!254;CL:0002251!1.31e-11!21;CL:0000223!1.62e-11!59;CL:0002159!2.52e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.10e-12;19!CL:0000622;1.94e-09;5!CL:0002076;2.05e-09;42!CL:0002541;5.69e-09;3!CL:0002577;3.94e-08;3!CL:0002231;3.94e-08;3!CL:0000154;7.43e-08;6!CL:0000317;8.09e-07;2!CL:1000448;8.09e-07;2!CL:0002308;8.09e-07;2!CL:0002140;8.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.91e-12,19;CL:0000066,1.23e-10,253;CL:0002076,1.32e-10,42;CL:0000622,3.04e-09,5;CL:0002541,5.20e-09,3;CL:0002577,4.01e-08,3;CL:0002231,6.04e-08,3;CL:0000223,6.76e-08,58;CL:0000154,1.07e-07,6;CL:0000317,9.62e-07,2;CL:1000448,9.62e-07,2;CL:0002308,9.62e-07,2;CL:0002140,9.62e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.29e-13!106;DOID:1749!5.95e-12!14;DOID:0050687!4.70e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.24e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.51e-14,14;DOID:305,2.18e-08,106;DOID:0050687,1.89e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.17e-20!169;UBERON:0000925!3.17e-20!169;UBERON:0006595!3.17e-20!169;UBERON:0001007!4.32e-16!155;UBERON:0001555!4.32e-16!155;UBERON:0007026!4.32e-16!155;UBERON:0000077!6.00e-16!130;UBERON:0000161!1.28e-13!35;UBERON:0004921!1.57e-12!129;UBERON:0004185!1.57e-12!129;UBERON:0001004!8.17e-11!72;UBERON:0005631!2.00e-10!14;UBERON:0000158!2.00e-10!14;UBERON:0001046!1.51e-09!19;UBERON:0003102!3.84e-09!95;UBERON:0000162!6.70e-09!14;UBERON:0001353!6.70e-09!14;UBERON:0000163!6.70e-09!14;UBERON:0006866!6.70e-09!14;UBERON:0000164!6.70e-09!14;UBERON:0000931!6.70e-09!14;UBERON:0003124!3.02e-08!7;UBERON:0004122!4.63e-08!15;UBERON:0000065!6.18e-08!53;UBERON:0003937!9.90e-08!12;UBERON:0005399!9.90e-08!12;UBERON:0000062!2.11e-07!511;UBERON:0005156!3.61e-07!59;UBERON:0000990!3.61e-07!59;UBERON:0003101!5.70e-07!22;UBERON:0000079!5.70e-07!22;UBERON:0001041!8.11e-07!98;UBERON:0002367!9.47e-07!11;UBERON:0010147!9.47e-07!11;UBERON:0009846!9.47e-07!11;UBERON:0003353!9.47e-07!11;UBERON:0004902!9.47e-07!11;UBERON:0003820!9.47e-07!11;UBERON:0009847!9.47e-07!11;UBERON:0005153!9.97e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.95e-14;24!UBERON:0005631;4.96e-13;10!UBERON:0000158;4.96e-13;10!UBERON:0001987;8.53e-11;4!UBERON:0003124;5.69e-09;3!UBERON:0000920;5.69e-09;3!UBERON:0002419;8.09e-07;2!UBERON:0007771;8.09e-07;2!UBERON:0003297;8.09e-07;2!UBERON:0001821;8.09e-07;2!UBERON:0003487;8.09e-07;2!UBERON:0001820;8.09e-07;2!UBERON:0000305;9.57e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.28e-21,14;UBERON:0000158,1.28e-21,14;UBERON:0003124,5.01e-18,7;UBERON:0000478,7.01e-14,24;UBERON:0000995,6.31e-11,21;UBERON:0004175,6.53e-11,25;UBERON:0001987,1.00e-10,4;UBERON:0004340,1.00e-10,4;UBERON:0005795,2.46e-10,22;UBERON:0003975,2.46e-10,22;UBERON:0000920,5.20e-09,3;UBERON:0005156,6.90e-09,59;UBERON:0000990,6.90e-09,59;UBERON:0000161,3.45e-08,36;UBERON:0004119,5.50e-08,160;UBERON:0000925,5.50e-08,160;UBERON:0006595,5.50e-08,160;UBERON:0000305,8.91e-07,7;UBERON:0004923,9.32e-07,66;UBERON:0002419,9.62e-07,2;UBERON:0007771,9.62e-07,2;UBERON:0003297,9.62e-07,2;UBERON:0001821,9.62e-07,2;UBERON:0003487,9.62e-07,2;UBERON:0001820,9.62e-07,2;UBERON:0005089,9.62e-07,2;UBERON:0005088,9.62e-07,2 | |||
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| |||
|short_description=p9@RALBP1 | |||
}} |
Revision as of 18:27, 11 September 2013
Short description: | p9@RALBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RALBP1_5end |
Coexpression cluster: | C3744_salivary_adenocarcinoma_lung_ductal_amniotic_serous_chorionic |
Association with transcript: | 50bp_to_ENST00000019317, uc002kob.2_5end |
EntrezGene: | RALBP1 |
HGNC: | 9841 |
UniProt: | Q15311 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.91e-12 | 19 |
epithelial cell | 1.23e-10 | 253 |
endo-epithelial cell | 1.32e-10 | 42 |
acinar cell | 3.04e-09 | 5 |
chorionic membrane mesenchymal stem cell | 5.20e-09 | 3 |
placental epithelial cell | 4.01e-08 | 3 |
epithelial cell of prostate | 6.04e-08 | 3 |
endodermal cell | 6.76e-08 | 58 |
protein secreting cell | 1.07e-07 | 6 |
sebum secreting cell | 9.62e-07 | 2 |
epithelial cell of sweat gland | 9.62e-07 | 2 |
epithelial cell of skin gland | 9.62e-07 | 2 |
acinar cell of sebaceous gland | 9.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.28e-21 | 14 |
membranous layer | 1.28e-21 | 14 |
chorion | 5.01e-18 | 7 |
extraembryonic structure | 7.01e-14 | 24 |
uterus | 6.31e-11 | 21 |
internal genitalia | 6.53e-11 | 25 |
placenta | 1.00e-10 | 4 |
allantois | 1.00e-10 | 4 |
embryonic uterus | 2.46e-10 | 22 |
internal female genitalia | 2.46e-10 | 22 |
egg chorion | 5.20e-09 | 3 |
reproductive structure | 6.90e-09 | 59 |
reproductive system | 6.90e-09 | 59 |
orifice | 3.45e-08 | 36 |
endoderm-derived structure | 5.50e-08 | 160 |
endoderm | 5.50e-08 | 160 |
presumptive endoderm | 5.50e-08 | 160 |
amnion | 8.91e-07 | 7 |
organ component layer | 9.32e-07 | 66 |
skin gland | 9.62e-07 | 2 |
epidermis gland | 9.62e-07 | 2 |
gland of integumental system | 9.62e-07 | 2 |
sebaceous gland | 9.62e-07 | 2 |
skin sebaceous gland | 9.62e-07 | 2 |
sweat gland | 9.62e-07 | 2 |
sweat gland placode | 9.62e-07 | 2 |
sebaceous gland placode | 9.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.51e-14 | 14 |
carcinoma | 2.18e-08 | 106 |
cell type cancer | 1.89e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.