FFCP PHASE1:Hg19::chr19:43967397..43967419,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1454|description=CAGE_peak_at_chr19:43967397..43967419,-|id=chr19:43967397..43967419,-|ontology_enrichment_celltype=CL:0002076!2.59e-08!43;CL:0002159!1.40e-07!13;CL:0000860!2.15e-07!45;CL:0000066!6.98e-07!254;CL:0002057!8.45e-07!42|ontology_enrichment_celltype_v019=CL:0002159;2.53e-13;14!CL:0000244;8.75e-13;4!CL:0000731;8.75e-13;4!CL:0000575;2.53e-12;2!CL:0000312;4.98e-10;5!CL:0000362;1.57e-09;9!CL:0000240;1.95e-08;6!CL:0000311;1.95e-08;6!CL:0000079;1.95e-08;6!CL:0000237;1.95e-08;6!CL:0002577;3.73e-08;3!CL:0000860;2.70e-07;33!CL:0002057;2.70e-07;33!CL:0000349;5.94e-07;19|ontology_enrichment_celltype_v019_2=CL:0002159,2.71e-13,14;CL:0000244,5.27e-13,4;CL:0000731,5.27e-13,4;CL:0000575,2.40e-12,2;CL:0000312,7.27e-10,5;CL:0000362,1.72e-09,9;CL:0000240,2.66e-08,6;CL:0000311,2.66e-08,6;CL:0000079,2.66e-08,6;CL:0000237,2.66e-08,6;CL:0000036,2.66e-08,6;CL:0000357,2.66e-08,6;CL:0000114,2.66e-08,6;CL:0002577,2.84e-08,3;CL:0000349,5.61e-07,19|ontology_enrichment_development_v019=CL:0000357;1.95e-08;6!CL:0000114;1.95e-08;6!UBERON:0009143;3.13e-07;1!UBERON:0000358;6.79e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.79e-11!14;UBERON:0000158!1.79e-11!14;UBERON:0001004!3.59e-10!72;UBERON:0004119!9.72e-10!169;UBERON:0000925!9.72e-10!169;UBERON:0006595!9.72e-10!169;UBERON:0003124!2.27e-08!7;UBERON:0000161!6.89e-08!35;UBERON:0000065!8.16e-08!53;UBERON:0005910!2.32e-07!6;UBERON:0000077!6.16e-07!130;UBERON:0000365!8.10e-07!5|ontology_enrichment_uberon_v019=UBERON:0000365;2.51e-10;5!UBERON:0005910;1.10e-08;6!UBERON:0001723;1.33e-08;3!UBERON:0001033;1.33e-08;3!UBERON:0001043;2.28e-08;3!UBERON:0000478;1.22e-07;24!UBERON:0000305;1.47e-07;7!UBERON:0002372;6.79e-07;1!UBERON:0001961;6.79e-07;1!UBERON:0001744;6.79e-07;1!UBERON:0001042;6.79e-07;1!UBERON:0001735;6.79e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.68e-10,5;UBERON:0005631,1.46e-09,14;UBERON:0000158,1.46e-09,14;UBERON:0005910,7.92e-09,6;UBERON:0001723,1.46e-08,3;UBERON:0001033,1.46e-08,3;UBERON:0010056,1.46e-08,3;UBERON:0001043,2.12e-08,3;UBERON:0009143,2.12e-08,3;UBERON:0000478,1.20e-07,24;UBERON:0000305,1.58e-07,7;UBERON:0002372,6.99e-07,1;UBERON:0001961,6.99e-07,1;UBERON:0001744,6.99e-07,1;UBERON:0001735,6.99e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.929716147622738,0.822335776043652,0.619412741790207,0,0,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0,3.67300670845083,0.641858054152187,3.19668562899521,0,0,0,5.5139755339431,2.8369261234557,3.73693349397345,0,0,0,5.44859552370032,2.20966581592539,0.949387162322653,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,1.180258620683,0.786021525498329,1.23360899399706,0,0.32592226663359,1.4203434172042,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0.889719378972363,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,3.27865759463288,2.59549109949101,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0.243947412259191,0.265059536642971,0,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,1.09750285408626,1.1240175325762,1.00528972411631,0.555530670951178,0,0,0,0,0,0,0,0,3.1608175918371,0.858486162094873,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.06727557803444,0.606255142892519,1.66435439510497,2.72151263996712,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,1.72202149068492,1.68471475667626,3.54744122829341,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.1915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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1454 | |||
|description=CAGE_peak_at_chr19:43967397..43967419,- | |||
|id=chr19:43967397..43967419,- | |||
|ontology_enrichment_celltype=CL:0002076!2.59e-08!43;CL:0002159!1.40e-07!13;CL:0000860!2.15e-07!45;CL:0000066!6.98e-07!254;CL:0002057!8.45e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.53e-13;14!CL:0000244;8.75e-13;4!CL:0000731;8.75e-13;4!CL:0000575;2.53e-12;2!CL:0000312;4.98e-10;5!CL:0000362;1.57e-09;9!CL:0000240;1.95e-08;6!CL:0000311;1.95e-08;6!CL:0000079;1.95e-08;6!CL:0000237;1.95e-08;6!CL:0002577;3.73e-08;3!CL:0000860;2.70e-07;33!CL:0002057;2.70e-07;33!CL:0000349;5.94e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.71e-13,14;CL:0000244,5.27e-13,4;CL:0000731,5.27e-13,4;CL:0000575,2.40e-12,2;CL:0000312,7.27e-10,5;CL:0000362,1.72e-09,9;CL:0000240,2.66e-08,6;CL:0000311,2.66e-08,6;CL:0000079,2.66e-08,6;CL:0000237,2.66e-08,6;CL:0000036,2.66e-08,6;CL:0000357,2.66e-08,6;CL:0000114,2.66e-08,6;CL:0002577,2.84e-08,3;CL:0000349,5.61e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000357;1.95e-08;6!CL:0000114;1.95e-08;6!UBERON:0009143;3.13e-07;1!UBERON:0000358;6.79e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.79e-11!14;UBERON:0000158!1.79e-11!14;UBERON:0001004!3.59e-10!72;UBERON:0004119!9.72e-10!169;UBERON:0000925!9.72e-10!169;UBERON:0006595!9.72e-10!169;UBERON:0003124!2.27e-08!7;UBERON:0000161!6.89e-08!35;UBERON:0000065!8.16e-08!53;UBERON:0005910!2.32e-07!6;UBERON:0000077!6.16e-07!130;UBERON:0000365!8.10e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.51e-10;5!UBERON:0005910;1.10e-08;6!UBERON:0001723;1.33e-08;3!UBERON:0001033;1.33e-08;3!UBERON:0001043;2.28e-08;3!UBERON:0000478;1.22e-07;24!UBERON:0000305;1.47e-07;7!UBERON:0002372;6.79e-07;1!UBERON:0001961;6.79e-07;1!UBERON:0001744;6.79e-07;1!UBERON:0001042;6.79e-07;1!UBERON:0001735;6.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.68e-10,5;UBERON:0005631,1.46e-09,14;UBERON:0000158,1.46e-09,14;UBERON:0005910,7.92e-09,6;UBERON:0001723,1.46e-08,3;UBERON:0001033,1.46e-08,3;UBERON:0010056,1.46e-08,3;UBERON:0001043,2.12e-08,3;UBERON:0009143,2.12e-08,3;UBERON:0000478,1.20e-07,24;UBERON:0000305,1.58e-07,7;UBERON:0002372,6.99e-07,1;UBERON:0001961,6.99e-07,1;UBERON:0001744,6.99e-07,1;UBERON:0001735,6.99e-07,1 | |||
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|short_description=p@chr19:43967397..43967419,- | |||
}} |
Revision as of 21:00, 11 September 2013
Short description: | p@chr19:43967397..43967419, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:43967397..43967419, - |
Coexpression cluster: | C1454_tongue_esophagus_CD14_throat_skin_amniotic_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.71e-13 | 14 |
transitional epithelial cell | 5.27e-13 | 4 |
urothelial cell | 5.27e-13 | 4 |
corneal epithelial cell | 2.40e-12 | 2 |
keratinocyte | 7.27e-10 | 5 |
epidermal cell | 1.72e-09 | 9 |
stratified squamous epithelial cell | 2.66e-08 | 6 |
keratin accumulating cell | 2.66e-08 | 6 |
stratified epithelial cell | 2.66e-08 | 6 |
keratinizing barrier epithelial cell | 2.66e-08 | 6 |
epithelial fate stem cell | 2.66e-08 | 6 |
stratified epithelial stem cell | 2.66e-08 | 6 |
surface ectodermal cell | 2.66e-08 | 6 |
placental epithelial cell | 2.84e-08 | 3 |
extraembryonic cell | 5.61e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.68e-10 | 5 |
extraembryonic membrane | 1.46e-09 | 14 |
membranous layer | 1.46e-09 | 14 |
transitional epithelium | 7.92e-09 | 6 |
tongue | 1.46e-08 | 3 |
gustatory system | 1.46e-08 | 3 |
future tongue | 1.46e-08 | 3 |
esophagus | 2.12e-08 | 3 |
esophageal region | 2.12e-08 | 3 |
extraembryonic structure | 1.20e-07 | 24 |
amnion | 1.58e-07 | 7 |
tonsil | 6.99e-07 | 1 |
mucosa-associated lymphoid tissue | 6.99e-07 | 1 |
lymphoid tissue | 6.99e-07 | 1 |
tonsillar ring | 6.99e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.