FFCP PHASE1:Hg19::chr19:48614051..48614062,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8605|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9037|TSSclassifier=S|UniProt=Q9UP65,B4DI40|association_with_transcript=46bp_to_ENST00000354276,NM_001159322,NM_001159323,NM_003706,uc002phx.2,uc002phy.3,uc010elr.2,uc010xzd.1_5end|description=CAGE_peak_4_at_PLA2G4C_5end|id=chr19:48614051..48614062,-|ontology_enrichment_celltype=CL:0002139!1.47e-14!24;CL:0000115!6.04e-13!35;CL:0002078!7.04e-11!44;CL:0000213!3.20e-10!57;CL:0000215!3.20e-10!57;CL:0000071!4.96e-10!18;CL:0002546!4.96e-10!18|ontology_enrichment_celltype_v019=CL:0002139;1.02e-14;24!CL:0002138;1.04e-13;6!CL:0000115;5.18e-11;36!CL:0002144;5.77e-08;3!CL:0002078;1.55e-07;45|ontology_enrichment_celltype_v019_2=CL:0002139,4.70e-15,24;CL:0005020,1.13e-13,6;CL:0002138,1.13e-13,6;CL:0005022,1.13e-13,6;CL:0000115,2.02e-13,36;CL:0002078,8.42e-10,45;CL:0000213,2.02e-08,58;CL:0000215,2.02e-08,58;CL:0002144,5.10e-08,3|ontology_enrichment_development_v019=CL:0005022;1.04e-13;6!UBERON:0006601;8.66e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.08e-30!115;UBERON:0001049!6.03e-22!57;UBERON:0005068!6.03e-22!57;UBERON:0006241!6.03e-22!57;UBERON:0007135!6.03e-22!57;UBERON:0000025!4.05e-18!194;UBERON:0002780!8.73e-18!41;UBERON:0001890!8.73e-18!41;UBERON:0006240!8.73e-18!41;UBERON:0005743!2.47e-17!86;UBERON:0004111!2.63e-17!241;UBERON:0003080!5.77e-17!42;UBERON:0002616!8.02e-17!59;UBERON:0003075!9.55e-17!86;UBERON:0007284!9.55e-17!86;UBERON:0002346!1.40e-16!90;UBERON:0000955!1.86e-16!69;UBERON:0006238!1.86e-16!69;UBERON:0001017!5.63e-16!82;UBERON:0000073!1.40e-15!94;UBERON:0001016!1.40e-15!94;UBERON:0001893!2.79e-15!34;UBERON:0002020!3.50e-15!34;UBERON:0003528!3.50e-15!34;UBERON:0000477!4.22e-15!286;UBERON:0002791!1.34e-14!33;UBERON:0001869!4.97e-14!32;UBERON:0002619!3.10e-12!22;UBERON:0000483!3.88e-12!309;UBERON:0000119!8.16e-12!312;UBERON:0001950!6.15e-11!20;UBERON:0003056!7.83e-11!61;UBERON:0001986!4.96e-10!18;UBERON:0004638!4.96e-10!18;UBERON:0004852!4.96e-10!18;UBERON:0000956!1.04e-09!25;UBERON:0000203!1.04e-09!25;UBERON:0000153!1.38e-09!129;UBERON:0007811!1.38e-09!129;UBERON:0000467!2.62e-09!625;UBERON:0000480!3.61e-09!626;UBERON:0000033!4.72e-09!123;UBERON:0000468!5.40e-09!659;UBERON:0000064!8.48e-08!219;UBERON:0000487!1.16e-07!22;UBERON:0006914!1.89e-07!25;UBERON:0002308!2.35e-07!9;UBERON:0000125!2.35e-07!9;UBERON:0002420!3.72e-07!9;UBERON:0007245!3.72e-07!9;UBERON:0010009!3.72e-07!9;UBERON:0010011!3.72e-07!9;UBERON:0000454!3.72e-07!9|ontology_enrichment_uberon_v019=UBERON:0001893;2.04e-22;34!UBERON:0003528;3.02e-22;34!UBERON:0002020;3.02e-22;34!UBERON:0002780;3.24e-22;41!UBERON:0001890;3.24e-22;41!UBERON:0001869;1.17e-21;32!UBERON:0002791;3.78e-21;32!UBERON:0002619;8.39e-21;22!UBERON:0000073;9.03e-19;53!UBERON:0002616;9.03e-19;53!UBERON:0001950;6.79e-18;20!UBERON:0000956;7.40e-18;25!UBERON:0000203;7.40e-18;25!UBERON:0000125;1.73e-10;9!UBERON:0002308;1.73e-10;9!UBERON:0000955;2.39e-10;68!UBERON:0007023;4.45e-10;114!UBERON:0001473;4.96e-10;8!UBERON:0004536;4.96e-10;8!UBERON:0006558;4.96e-10;8!UBERON:0001017;9.75e-10;75!UBERON:0004732;1.41e-08;13!UBERON:0000200;1.93e-08;6!UBERON:0001016;2.86e-08;83!UBERON:0002298;3.93e-08;6!UBERON:0010523;5.77e-08;3!UBERON:0001915;5.77e-08;3!UBERON:0001982;5.77e-08;3!UBERON:0002465;7.94e-08;10!UBERON:0009663;1.61e-07;7!UBERON:0004733;2.71e-07;12!UBERON:0002028;2.71e-07;12!UBERON:0001870;4.25e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.86e-39,56;UBERON:0005068,3.86e-39,56;UBERON:0006241,3.86e-39,56;UBERON:0007135,3.86e-39,56;UBERON:0000073,3.32e-37,53;UBERON:0002616,3.32e-37,53;UBERON:0007023,1.36e-35,114;UBERON:0002780,2.93e-31,41;UBERON:0001890,2.93e-31,41;UBERON:0003080,2.93e-31,41;UBERON:0006240,2.93e-31,41;UBERON:0003075,9.75e-30,82;UBERON:0007284,9.75e-30,82;UBERON:0002346,2.05e-29,86;UBERON:0001893,1.58e-27,34;UBERON:0003528,2.61e-27,34;UBERON:0002020,2.61e-27,34;UBERON:0000955,2.95e-26,68;UBERON:0006238,2.95e-26,68;UBERON:0001017,6.92e-25,81;UBERON:0001869,1.57e-24,32;UBERON:0002791,1.65e-24,32;UBERON:0001016,9.03e-23,89;UBERON:0010371,2.35e-22,104;UBERON:0003056,1.53e-21,61;UBERON:0002619,3.10e-21,22;UBERON:0004111,4.13e-21,240;UBERON:0000025,5.92e-21,192;UBERON:0010314,1.47e-19,132;UBERON:0000956,3.11e-18,25;UBERON:0000203,3.11e-18,25;UBERON:0001950,4.08e-18,20;UBERON:0004121,8.86e-13,171;UBERON:0000924,8.86e-13,171;UBERON:0006601,8.86e-13,171;UBERON:0000483,2.22e-12,306;UBERON:0000119,4.24e-12,309;UBERON:0000125,8.72e-11,9;UBERON:0002308,8.72e-11,9;UBERON:0001473,5.27e-10,8;UBERON:0004536,5.27e-10,8;UBERON:0006558,5.27e-10,8;UBERON:0003076,4.95e-09,15;UBERON:0003057,4.95e-09,15;UBERON:0000200,1.39e-08,6;UBERON:0004732,1.44e-08,13;UBERON:0010523,5.10e-08,3;UBERON:0001915,5.10e-08,3;UBERON:0001982,5.10e-08,3;UBERON:0002298,6.20e-08,6;UBERON:0009663,7.17e-08,7;UBERON:0002465,8.31e-08,10;UBERON:0001870,2.24e-07,3;UBERON:0004733,2.93e-07,12;UBERON:0002028,2.93e-07,12;UBERON:0007277,2.93e-07,12;UBERON:0011216,9.00e-07,223|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0.157421562627358,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0.601633342410425,0,0,0,0.515151135268373,0.145398238779565,0,0,0.697287110717054,0.411167888021826,0,0.575384784644301,0,0.236482229888585,1.37898272294647,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,1.24564449799115,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,2.98711155796555,0.400395987036012,0,0,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,1.38856200643038,0.56530794192401,2.09749718104953,0.550236083880135,1.8809546988313,1.29208379584664,2.49036383880697,5.02080919147005,4.02829317109147,3.80136052859256,3.90499292077071,0.735326160691737,1.62028389576352,0.267899184852239,0.673588117878509,0.675668882899933,1.53316637465883,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.794455084879313,0,0,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.751190294532984,0,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0.368199594569197,0,0.355009592516614,0.10075209822764,0.169560592310488,0.386521706326594,0.818238361772504,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.38474715694639,2.21446636387394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,8.08452107462013,9.25971025153221,3.23432058798817,0,0,0.738651018262192,1.63802985597466,0.445893486866185,0.93733833986777,0,0.283550194484773,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.190493682876507,0.763976851116555,1.17217447210047,0,0,0.901029173531752,0,0,0,0.07333828582095,0.258543431515556,3.57656445851882,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0.65147236858747,0.355391948742546,0,1.20575750823834,0,0.799783929456456,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0.917870904715969,1.35359883872224,0.462092022626489,0,0,0.633309773357254,1.13733384070897,0.510281115829547,0.647747748306418,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0.608731130888112,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.557409525377156,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.796991953004279,1.10513566212459,0,0.102268682502155,0.492339221844278,0.311039587661807,0,0.179021174675609,0,0.394573622547734,2.3948309234694,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0.254253650292766,0,0,0,0,2.65722415744152,0.964771509003264,0,2.10100593869327,1.77328571372128,1.31631238292384,0,0.139423744278603,0.230850775511391,1.59518878185802,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0.593042257361244,0.247127877893006,0.208843899010911,1.28062152663286,1.60515529459758,1.87411556580271,0,0,0,0,2.41981432097328,0,0.252746318513952,3.30711522711884,0,0,2.31694369112849,0.627865836814451,0,0,0.554698692052555,0,0.0979923974143777,0.0870592065804026,1.39781334593624,0.687944129886466,0,0.0730893170861856,0,0.387956065953678,0.617792886840502,1.35588444468319,0.274083849293502,0.19871461170299,1.89932387867636,0.391102765469606,0.400794101257669,0.213452994739353,0.39961921916426,0,0,0,0.432164393964449,1.24252535565433,0,0.271808412147228,0.209205692624666,0.101998217636322,0.288950589901519,3.60252173225874,2.46429682005587,0,0,0.262887354279314,1.1171296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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8605 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9037 | |||
|TSSclassifier=S | |||
|UniProt=Q9UP65,B4DI40 | |||
|association_with_transcript=46bp_to_ENST00000354276,NM_001159322,NM_001159323,NM_003706,uc002phx.2,uc002phy.3,uc010elr.2,uc010xzd.1_5end | |||
|description=CAGE_peak_4_at_PLA2G4C_5end | |||
|id=chr19:48614051..48614062,- | |||
|ontology_enrichment_celltype=CL:0002139!1.47e-14!24;CL:0000115!6.04e-13!35;CL:0002078!7.04e-11!44;CL:0000213!3.20e-10!57;CL:0000215!3.20e-10!57;CL:0000071!4.96e-10!18;CL:0002546!4.96e-10!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.02e-14;24!CL:0002138;1.04e-13;6!CL:0000115;5.18e-11;36!CL:0002144;5.77e-08;3!CL:0002078;1.55e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.70e-15,24;CL:0005020,1.13e-13,6;CL:0002138,1.13e-13,6;CL:0005022,1.13e-13,6;CL:0000115,2.02e-13,36;CL:0002078,8.42e-10,45;CL:0000213,2.02e-08,58;CL:0000215,2.02e-08,58;CL:0002144,5.10e-08,3 | |||
|ontology_enrichment_development_v019=CL:0005022;1.04e-13;6!UBERON:0006601;8.66e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.86e-39,56;UBERON:0005068,3.86e-39,56;UBERON:0006241,3.86e-39,56;UBERON:0007135,3.86e-39,56;UBERON:0000073,3.32e-37,53;UBERON:0002616,3.32e-37,53;UBERON:0007023,1.36e-35,114;UBERON:0002780,2.93e-31,41;UBERON:0001890,2.93e-31,41;UBERON:0003080,2.93e-31,41;UBERON:0006240,2.93e-31,41;UBERON:0003075,9.75e-30,82;UBERON:0007284,9.75e-30,82;UBERON:0002346,2.05e-29,86;UBERON:0001893,1.58e-27,34;UBERON:0003528,2.61e-27,34;UBERON:0002020,2.61e-27,34;UBERON:0000955,2.95e-26,68;UBERON:0006238,2.95e-26,68;UBERON:0001017,6.92e-25,81;UBERON:0001869,1.57e-24,32;UBERON:0002791,1.65e-24,32;UBERON:0001016,9.03e-23,89;UBERON:0010371,2.35e-22,104;UBERON:0003056,1.53e-21,61;UBERON:0002619,3.10e-21,22;UBERON:0004111,4.13e-21,240;UBERON:0000025,5.92e-21,192;UBERON:0010314,1.47e-19,132;UBERON:0000956,3.11e-18,25;UBERON:0000203,3.11e-18,25;UBERON:0001950,4.08e-18,20;UBERON:0004121,8.86e-13,171;UBERON:0000924,8.86e-13,171;UBERON:0006601,8.86e-13,171;UBERON:0000483,2.22e-12,306;UBERON:0000119,4.24e-12,309;UBERON:0000125,8.72e-11,9;UBERON:0002308,8.72e-11,9;UBERON:0001473,5.27e-10,8;UBERON:0004536,5.27e-10,8;UBERON:0006558,5.27e-10,8;UBERON:0003076,4.95e-09,15;UBERON:0003057,4.95e-09,15;UBERON:0000200,1.39e-08,6;UBERON:0004732,1.44e-08,13;UBERON:0010523,5.10e-08,3;UBERON:0001915,5.10e-08,3;UBERON:0001982,5.10e-08,3;UBERON:0002298,6.20e-08,6;UBERON:0009663,7.17e-08,7;UBERON:0002465,8.31e-08,10;UBERON:0001870,2.24e-07,3;UBERON:0004733,2.93e-07,12;UBERON:0002028,2.93e-07,12;UBERON:0007277,2.93e-07,12;UBERON:0011216,9.00e-07,223 | |||
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| |||
|short_description=p4@PLA2G4C | |||
}} |
Revision as of 21:34, 11 September 2013
Short description: | p4@PLA2G4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PLA2G4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000354276, NM_001159322, NM_001159323, NM_003706, uc002phx.2, uc002phy.3, uc010elr.2, uc010xzd.1_5end |
EntrezGene: | PLA2G4C |
HGNC: | 9037 |
UniProt: | Q9UP65B4DI40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.70e-15 | 24 |
lymphangioblast | 1.13e-13 | 6 |
endothelial cell of lymphatic vessel | 1.13e-13 | 6 |
vascular lymphangioblast | 1.13e-13 | 6 |
endothelial cell | 2.02e-13 | 36 |
meso-epithelial cell | 8.42e-10 | 45 |
lining cell | 2.02e-08 | 58 |
barrier cell | 2.02e-08 | 58 |
capillary endothelial cell | 5.10e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.