FFCP PHASE1:Hg19::chr19:6584706..6584710,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1828|description=CAGE_peak_at_chr19:6584706..6584710,-|id=chr19:6584706..6584710,-|ontology_enrichment_celltype=CL:0000945!1.03e-11!24;CL:0000826!1.03e-11!24;CL:0000542!5.02e-08!53;CL:0000051!5.02e-08!53;CL:0000838!3.39e-07!52|ontology_enrichment_celltype_v019=CL:0000945;2.22e-15;24!CL:0002379;1.55e-09;1!CL:0000785;3.67e-09;1!CL:0000819;3.67e-09;1!CL:0000542;4.58e-08;53|ontology_enrichment_celltype_v019_2=CL:0000945,2.36e-15,24;CL:0000826,2.36e-15,24;CL:0000838,1.19e-13,52;CL:0000542,2.30e-13,53;CL:0000051,2.30e-13,53;CL:0002379,1.69e-09,1;CL:0000819,3.53e-09,1;CL:0000988,2.04e-07,177|ontology_enrichment_development_v019=CL:0000051;4.58e-08;53|ontology_enrichment_disease=DOID:0060058!5.71e-13!10;DOID:14566!7.34e-13!239;DOID:162!4.48e-12!235;DOID:0050686!9.14e-08!137;DOID:2531!1.79e-07!51;DOID:0060083!1.79e-07!51|ontology_enrichment_disease_v019=DOID:0060058;6.24e-20;10!DOID:6193;8.67e-10;1!DOID:0060060;1.55e-09;1!DOID:3620;1.55e-09;1!DOID:0060061;1.55e-09;1!DOID:3565;1.55e-09;1!DOID:8691;1.55e-09;1!DOID:2355;1.55e-09;1!DOID:630;3.67e-09;1!DOID:0050177;3.67e-09;1!DOID:0060073;3.67e-09;1!DOID:8675;3.67e-09;1!DOID:0050427;3.67e-09;1|ontology_enrichment_disease_v019_2=DOID:0060058,5.55e-20,10;DOID:6193,9.44e-10,1;DOID:0060060,1.21e-09,1;DOID:0060061,1.21e-09,1;DOID:8691,1.21e-09,1;DOID:3620,1.69e-09,1;DOID:3565,1.69e-09,1;DOID:2355,2.16e-09,1;DOID:630,3.00e-09,1;DOID:0050177,3.00e-09,1;DOID:0050427,3.00e-09,1;DOID:0060073,3.53e-09,1;DOID:8675,3.53e-09,1;DOID:2531,5.48e-09,51;DOID:0060083,5.48e-09,51|ontology_enrichment_uberon=UBERON:0001737!3.48e-13!9|ontology_enrichment_uberon_v019=UBERON:0002331;4.73e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.20e-08,10;UBERON:0000358,4.20e-08,10;UBERON:0000307,4.20e-08,10;UBERON:0000091,4.20e-08,10;UBERON:0000087,4.20e-08,10;UBERON:0007010,4.20e-08,10;UBERON:0007806,4.20e-08,10;UBERON:0008780,4.20e-08,10;UBERON:0005728,4.20e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,1.22261449196722,1.9704141467987,1.02324015707783,0,0,0,0,0,0,0.697204805222715,2.41687695228617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,2.0494611156108,2.60118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.828147600278907,0.505754070234305,0,0.772057809126758,0.653638332277218,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527758144464379,0,0,0.647747748306418,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.457847324091717,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0.614481528616916,0,0.667396566847634,0,0,0,0,0,0,0,0,0,1.33732061132974,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0,0,0.492339221844278,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,4.15129580152871,2.96553453471607,4.28129992972367,0,0,0,1.27718352450966,0,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.174118413160805,0,4.1276647793188,0,0,0,0,0.353024506766001,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0.717873024576814,0,0,0,0,0,1.16495949527454,0,0,0,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56895121467328,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.624902039810533,0,0,2.35265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00979216620984,0,0,0,0,0.176689145945881,0,0,0.512483037175893,1.0362910251936,0,0,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,2.79982354196902,0.213383459388282,0.344429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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1828 | |||
|description=CAGE_peak_at_chr19:6584706..6584710,- | |||
|id=chr19:6584706..6584710,- | |||
|ontology_enrichment_celltype=CL:0000945!1.03e-11!24;CL:0000826!1.03e-11!24;CL:0000542!5.02e-08!53;CL:0000051!5.02e-08!53;CL:0000838!3.39e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.22e-15;24!CL:0002379;1.55e-09;1!CL:0000785;3.67e-09;1!CL:0000819;3.67e-09;1!CL:0000542;4.58e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.36e-15,24;CL:0000826,2.36e-15,24;CL:0000838,1.19e-13,52;CL:0000542,2.30e-13,53;CL:0000051,2.30e-13,53;CL:0002379,1.69e-09,1;CL:0000819,3.53e-09,1;CL:0000988,2.04e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.58e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.71e-13!10;DOID:14566!7.34e-13!239;DOID:162!4.48e-12!235;DOID:0050686!9.14e-08!137;DOID:2531!1.79e-07!51;DOID:0060083!1.79e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.24e-20;10!DOID:6193;8.67e-10;1!DOID:0060060;1.55e-09;1!DOID:3620;1.55e-09;1!DOID:0060061;1.55e-09;1!DOID:3565;1.55e-09;1!DOID:8691;1.55e-09;1!DOID:2355;1.55e-09;1!DOID:630;3.67e-09;1!DOID:0050177;3.67e-09;1!DOID:0060073;3.67e-09;1!DOID:8675;3.67e-09;1!DOID:0050427;3.67e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.55e-20,10;DOID:6193,9.44e-10,1;DOID:0060060,1.21e-09,1;DOID:0060061,1.21e-09,1;DOID:8691,1.21e-09,1;DOID:3620,1.69e-09,1;DOID:3565,1.69e-09,1;DOID:2355,2.16e-09,1;DOID:630,3.00e-09,1;DOID:0050177,3.00e-09,1;DOID:0050427,3.00e-09,1;DOID:0060073,3.53e-09,1;DOID:8675,3.53e-09,1;DOID:2531,5.48e-09,51;DOID:0060083,5.48e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.48e-13!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.73e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.20e-08,10;UBERON:0000358,4.20e-08,10;UBERON:0000307,4.20e-08,10;UBERON:0000091,4.20e-08,10;UBERON:0000087,4.20e-08,10;UBERON:0007010,4.20e-08,10;UBERON:0007806,4.20e-08,10;UBERON:0008780,4.20e-08,10;UBERON:0005728,4.20e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,1.22261449196722,1.9704141467987,1.02324015707783,0,0,0,0,0,0,0.697204805222715,2.41687695228617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,2.0494611156108,2.60118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.828147600278907,0.505754070234305,0,0.772057809126758,0.653638332277218,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527758144464379,0,0,0.647747748306418,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.457847324091717,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0.614481528616916,0,0.667396566847634,0,0,0,0,0,0,0,0,0,1.33732061132974,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0,0,0.492339221844278,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,4.15129580152871,2.96553453471607,4.28129992972367,0,0,0,1.27718352450966,0,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.174118413160805,0,4.1276647793188,0,0,0,0,0.353024506766001,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0.717873024576814,0,0,0,0,0,1.16495949527454,0,0,0,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56895121467328,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.624902039810533,0,0,2.35265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00979216620984,0,0,0,0,0.176689145945881,0,0,0.512483037175893,1.0362910251936,0,0,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,2.79982354196902,0.213383459388282,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.426067023795788,0,0.22910686854405,0.31020638566432,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0,0,0,0,0,0.23806443146374,0,0,1.12131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p@chr19:6584706..6584710,- | |||
}} |
Revision as of 22:47, 11 September 2013
Short description: | p@chr19:6584706..6584710, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6584706..6584710, - |
Coexpression cluster: | C1828_epithelioid_lymphangiectasia_cord_meningioma_adult_renal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.36e-15 | 24 |
pro-B cell | 2.36e-15 | 24 |
lymphoid lineage restricted progenitor cell | 1.19e-13 | 52 |
lymphocyte | 2.30e-13 | 53 |
common lymphoid progenitor | 2.30e-13 | 53 |
meningothelial cell | 1.69e-09 | 1 |
B-1 B cell | 3.53e-09 | 1 |
hematopoietic cell | 2.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.20e-08 | 10 |
blastocyst | 4.20e-08 | 10 |
blastula | 4.20e-08 | 10 |
bilaminar disc | 4.20e-08 | 10 |
inner cell mass | 4.20e-08 | 10 |
cleaving embryo | 4.20e-08 | 10 |
connecting stalk | 4.20e-08 | 10 |
inner cell mass derived epiblast | 4.20e-08 | 10 |
extraembryonic mesoderm | 4.20e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.55e-20 | 10 |
epithelioid sarcoma | 9.44e-10 | 1 |
non-Hodgkin lymphoma | 1.21e-09 | 1 |
cutaneous T cell lymphoma | 1.21e-09 | 1 |
mycosis fungoides | 1.21e-09 | 1 |
central nervous system cancer | 1.69e-09 | 1 |
meningioma | 1.69e-09 | 1 |
anemia | 2.16e-09 | 1 |
genetic disease | 3.00e-09 | 1 |
monogenic disease | 3.00e-09 | 1 |
xeroderma pigmentosum | 3.00e-09 | 1 |
lymphatic system cancer | 3.53e-09 | 1 |
lymphosarcoma | 3.53e-09 | 1 |
hematologic cancer | 5.48e-09 | 51 |
immune system cancer | 5.48e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.