FFCP PHASE1:Hg19::chr1:1289610..1289617,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54587|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7542|TSSclassifier=S|UniProt=|association_with_transcript=9bp_to_ENST00000478517_5end|coexpression_cluster_id=C1000|description=CAGE_peak_6_at_MXRA8_5end|id=chr1:1289610..1289617,-|ontology_enrichment_celltype=CL:0000055!5.85e-32!180;CL:0000057!2.49e-25!75;CL:0000048!4.93e-12!430;CL:0002334!1.03e-11!12;CL:0002620!1.51e-11!23;CL:0000723!2.92e-11!436;CL:0000034!2.95e-11!444;CL:0000680!6.26e-10!57;CL:0000056!6.26e-10!57;CL:0000355!6.26e-10!57;CL:0002371!1.05e-09!591;CL:0000183!2.60e-09!59;CL:0000144!6.34e-09!625;CL:0000187!1.08e-08!54;CL:0002320!9.54e-08!365;CL:0000393!2.40e-07!60;CL:0000211!2.40e-07!60;CL:0000192!3.10e-07!42;CL:0000514!3.10e-07!42|ontology_enrichment_celltype_v019=CL:0002334;2.07e-22;12!CL:0002620;1.09e-09;23!CL:0000136;1.02e-08;13!CL:0000135;1.19e-08;3!CL:0000388;1.19e-08;3!CL:0002615;1.34e-08;3!CL:0002559;5.18e-08;5!CL:0002579;6.03e-08;3!CL:0002580;9.87e-08;3!CL:0000057;1.33e-07;73!CL:0002320;4.34e-07;188!CL:0002570;4.45e-07;8|ontology_enrichment_celltype_v019_2=CL:0002334,8.73e-23,12;CL:0000057,1.24e-21,76;CL:0002320,3.81e-12,361;CL:0000136,1.04e-11,15;CL:0000048,3.05e-11,427;CL:0000723,7.55e-11,433;CL:0000034,2.42e-10,441;CL:0000134,4.00e-10,354;CL:0002620,1.30e-09,23;CL:0000135,1.11e-08,3;CL:0000388,1.11e-08,3;CL:0002615,1.20e-08,3;CL:0002559,3.55e-08,5;CL:0002580,4.37e-08,3;CL:0000219,5.73e-08,386;CL:0002579,8.47e-08,3;CL:0002570,6.37e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.88e-07;3!DOID:127;1.88e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,7.89e-08,3;DOID:127,7.89e-08,3|ontology_enrichment_uberon=UBERON:0000914!7.07e-12!83;UBERON:0002329!7.07e-12!83;UBERON:0003077!7.07e-12!83;UBERON:0003059!7.07e-12!83;UBERON:0007282!7.07e-12!83;UBERON:0009618!7.07e-12!83;UBERON:0007285!7.07e-12!83;UBERON:0004923!1.86e-10!57;UBERON:0004290!5.22e-10!70;UBERON:0002199!1.28e-09!45;UBERON:0002416!1.28e-09!45;UBERON:0002385!4.21e-09!63;UBERON:0001015!4.21e-09!63;UBERON:0000383!4.21e-09!63;UBERON:0003102!6.71e-09!95;UBERON:0005631!9.74e-09!14;UBERON:0000158!9.74e-09!14;UBERON:0000486!1.07e-08!82;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0002097!8.07e-08!40;UBERON:0002384!1.03e-07!375;UBERON:0003688!4.48e-07!6;UBERON:0002358!4.48e-07!6;UBERON:0003684!4.48e-07!6;UBERON:0001178!4.48e-07!6;UBERON:0000478!6.16e-07!24|ontology_enrichment_uberon_v019=UBERON:0004457;7.46e-17;9!UBERON:0000042;7.46e-17;9!UBERON:0003688;7.42e-15;6!UBERON:0002358;7.42e-15;6!UBERON:0003684;7.42e-15;6!UBERON:0001178;7.42e-15;6!UBERON:0001013;1.15e-09;14!UBERON:0007846;1.19e-08;3!UBERON:0000043;1.19e-08;3!UBERON:0007845;1.19e-08;3!UBERON:0002073;5.18e-08;5!UBERON:0002384;1.65e-07;198!UBERON:0002199;2.73e-07;46!UBERON:0002416;2.73e-07;46!UBERON:0004905;3.34e-07;8!UBERON:0000982;3.34e-07;8!UBERON:0004770;3.34e-07;8!UBERON:0002097;4.60e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.38e-15,6;UBERON:0002358,9.38e-15,6;UBERON:0003684,9.38e-15,6;UBERON:0001178,9.38e-15,6;UBERON:0002384,1.13e-12,371;UBERON:0004457,3.10e-12,12;UBERON:0000042,3.10e-12,12;UBERON:0002199,1.32e-11,46;UBERON:0002416,1.32e-11,46;UBERON:0001013,1.99e-09,14;UBERON:0002097,4.81e-09,41;UBERON:0007846,1.11e-08,3;UBERON:0000043,1.11e-08,3;UBERON:0007845,1.11e-08,3;UBERON:0002073,3.55e-08,5;UBERON:0005086,3.55e-08,5;UBERON:0003102,5.54e-08,99;UBERON:0004905,3.66e-07,8;UBERON:0000982,3.66e-07,8;UBERON:0004770,3.66e-07,8|phase1_expression=2.90685406832891,8.13581990785736,2.67813367782345,10.007329835313,3.12872766099101,3.48935409640147,0,0.631719873426831,1.04474251279935,0.245733936501509,0.697801167972428,0.873765488520689,0.791300934685361,0.618831764800233,1.32558950291166,2.6893005858071,1.20538905604795,0.730310090387373,0.487932798790507,0,0.408001382488506,0.626909442956176,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,2.17269778441236,0.795285947051099,0,0.283604451492204,1.33037638477538,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0,0.747243402759005,0.352303495931295,0,0.280901613404497,0.61246251376468,0.859840221182376,0.516628905878827,3.56400857184616,2.47266929278557,0,1.43723628363248,0.168336113954066,0.250237039743928,0,0.877955241761676,4.59731693698529,1.35214253015937,0.113432183160021,1.61450672119976,0.640672166455702,1.05965950579781,1.80054657650641,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54587 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7542 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000478517_5end | |||
|coexpression_cluster_id=C1000 | |||
|description=CAGE_peak_6_at_MXRA8_5end | |||
|id=chr1:1289610..1289617,- | |||
|ontology_enrichment_celltype=CL:0000055!5.85e-32!180;CL:0000057!2.49e-25!75;CL:0000048!4.93e-12!430;CL:0002334!1.03e-11!12;CL:0002620!1.51e-11!23;CL:0000723!2.92e-11!436;CL:0000034!2.95e-11!444;CL:0000680!6.26e-10!57;CL:0000056!6.26e-10!57;CL:0000355!6.26e-10!57;CL:0002371!1.05e-09!591;CL:0000183!2.60e-09!59;CL:0000144!6.34e-09!625;CL:0000187!1.08e-08!54;CL:0002320!9.54e-08!365;CL:0000393!2.40e-07!60;CL:0000211!2.40e-07!60;CL:0000192!3.10e-07!42;CL:0000514!3.10e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.07e-22;12!CL:0002620;1.09e-09;23!CL:0000136;1.02e-08;13!CL:0000135;1.19e-08;3!CL:0000388;1.19e-08;3!CL:0002615;1.34e-08;3!CL:0002559;5.18e-08;5!CL:0002579;6.03e-08;3!CL:0002580;9.87e-08;3!CL:0000057;1.33e-07;73!CL:0002320;4.34e-07;188!CL:0002570;4.45e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,8.73e-23,12;CL:0000057,1.24e-21,76;CL:0002320,3.81e-12,361;CL:0000136,1.04e-11,15;CL:0000048,3.05e-11,427;CL:0000723,7.55e-11,433;CL:0000034,2.42e-10,441;CL:0000134,4.00e-10,354;CL:0002620,1.30e-09,23;CL:0000135,1.11e-08,3;CL:0000388,1.11e-08,3;CL:0002615,1.20e-08,3;CL:0002559,3.55e-08,5;CL:0002580,4.37e-08,3;CL:0000219,5.73e-08,386;CL:0002579,8.47e-08,3;CL:0002570,6.37e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.88e-07;3!DOID:127;1.88e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.89e-08,3;DOID:127,7.89e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.07e-12!83;UBERON:0002329!7.07e-12!83;UBERON:0003077!7.07e-12!83;UBERON:0003059!7.07e-12!83;UBERON:0007282!7.07e-12!83;UBERON:0009618!7.07e-12!83;UBERON:0007285!7.07e-12!83;UBERON:0004923!1.86e-10!57;UBERON:0004290!5.22e-10!70;UBERON:0002199!1.28e-09!45;UBERON:0002416!1.28e-09!45;UBERON:0002385!4.21e-09!63;UBERON:0001015!4.21e-09!63;UBERON:0000383!4.21e-09!63;UBERON:0003102!6.71e-09!95;UBERON:0005631!9.74e-09!14;UBERON:0000158!9.74e-09!14;UBERON:0000486!1.07e-08!82;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0002097!8.07e-08!40;UBERON:0002384!1.03e-07!375;UBERON:0003688!4.48e-07!6;UBERON:0002358!4.48e-07!6;UBERON:0003684!4.48e-07!6;UBERON:0001178!4.48e-07!6;UBERON:0000478!6.16e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.46e-17;9!UBERON:0000042;7.46e-17;9!UBERON:0003688;7.42e-15;6!UBERON:0002358;7.42e-15;6!UBERON:0003684;7.42e-15;6!UBERON:0001178;7.42e-15;6!UBERON:0001013;1.15e-09;14!UBERON:0007846;1.19e-08;3!UBERON:0000043;1.19e-08;3!UBERON:0007845;1.19e-08;3!UBERON:0002073;5.18e-08;5!UBERON:0002384;1.65e-07;198!UBERON:0002199;2.73e-07;46!UBERON:0002416;2.73e-07;46!UBERON:0004905;3.34e-07;8!UBERON:0000982;3.34e-07;8!UBERON:0004770;3.34e-07;8!UBERON:0002097;4.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.38e-15,6;UBERON:0002358,9.38e-15,6;UBERON:0003684,9.38e-15,6;UBERON:0001178,9.38e-15,6;UBERON:0002384,1.13e-12,371;UBERON:0004457,3.10e-12,12;UBERON:0000042,3.10e-12,12;UBERON:0002199,1.32e-11,46;UBERON:0002416,1.32e-11,46;UBERON:0001013,1.99e-09,14;UBERON:0002097,4.81e-09,41;UBERON:0007846,1.11e-08,3;UBERON:0000043,1.11e-08,3;UBERON:0007845,1.11e-08,3;UBERON:0002073,3.55e-08,5;UBERON:0005086,3.55e-08,5;UBERON:0003102,5.54e-08,99;UBERON:0004905,3.66e-07,8;UBERON:0000982,3.66e-07,8;UBERON:0004770,3.66e-07,8 | |||
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| |||
|short_description=p6@MXRA8 | |||
}} |
Revision as of 23:56, 11 September 2013
Short description: | p6@MXRA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_MXRA8_5end |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | 9bp_to_ENST00000478517_5end |
EntrezGene: | MXRA8 |
HGNC: | 7542 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 8.73e-23 | 12 |
fibroblast | 1.24e-21 | 76 |
connective tissue cell | 3.81e-12 | 361 |
fat cell | 1.04e-11 | 15 |
multi fate stem cell | 3.05e-11 | 427 |
somatic stem cell | 7.55e-11 | 433 |
stem cell | 2.42e-10 | 441 |
mesenchymal cell | 4.00e-10 | 354 |
skin fibroblast | 1.30e-09 | 23 |
fibrocyte | 1.11e-08 | 3 |
tendon cell | 1.11e-08 | 3 |
adipocyte of omentum tissue | 1.20e-08 | 3 |
hair follicle cell | 3.55e-08 | 5 |
preadipocyte of the breast | 4.37e-08 | 3 |
motile cell | 5.73e-08 | 386 |
omentum preadipocyte | 8.47e-08 | 3 |
mesenchymal stem cell of adipose | 6.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.38e-15 | 6 |
peritoneum | 9.38e-15 | 6 |
abdominal cavity | 9.38e-15 | 6 |
visceral peritoneum | 9.38e-15 | 6 |
connective tissue | 1.13e-12 | 371 |
cavity lining | 3.10e-12 | 12 |
serous membrane | 3.10e-12 | 12 |
integument | 1.32e-11 | 46 |
integumental system | 1.32e-11 | 46 |
adipose tissue | 1.99e-09 | 14 |
skin of body | 4.81e-09 | 41 |
dense regular connective tissue | 1.11e-08 | 3 |
tendon | 1.11e-08 | 3 |
regular connective tissue | 1.11e-08 | 3 |
hair follicle | 3.55e-08 | 5 |
hair follicle placode | 3.55e-08 | 5 |
surface structure | 5.54e-08 | 99 |
articulation | 3.66e-07 | 8 |
skeletal joint | 3.66e-07 | 8 |
articular system | 3.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.89e-08 | 3 |
leiomyoma | 7.89e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.