FFCP PHASE1:Hg19::chr1:153969752..153969755,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:153969752..153969755,+|id=chr1:153969752..153969755,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002127;2.13e-07;1!CL:0000911;2.13e-07;1!CL:0000814;2.13e-07;1|ontology_enrichment_celltype_v019_2=CL:0002127,4.34e-07,1;CL:0000914,4.34e-07,1;CL:0000911,4.34e-07,1;CL:0000814,4.34e-07,1;CL:0002042,4.34e-07,1;CL:0002039,4.34e-07,1;CL:0002040,4.34e-07,1;CL:0002041,4.34e-07,1|ontology_enrichment_development_v019=UBERON:0009847;4.85e-09;3!UBERON:0003353;4.85e-09;3!UBERON:0005425;2.13e-07;1|ontology_enrichment_disease=DOID:162!2.19e-37!235;DOID:14566!2.54e-37!239;DOID:0050687!2.78e-28!143;DOID:305!7.87e-21!106;DOID:0050686!3.67e-19!137;DOID:2531!1.58e-07!51;DOID:0060083!1.58e-07!51;DOID:171!7.40e-07!10|ontology_enrichment_disease_v019=DOID:1909;4.04e-13;2!DOID:4556;4.85e-09;3!DOID:1749;1.85e-07;14!DOID:12603;2.13e-07;1|ontology_enrichment_disease_v019_2=DOID:1909,2.49e-13,2;DOID:162,2.08e-12,235;DOID:14566,4.82e-12,239;DOID:0050687,1.57e-11,143;DOID:4556,4.32e-09,3;DOID:12603,1.83e-07,1;DOID:1749,2.00e-07,14;DOID:305,2.87e-07,106|ontology_enrichment_uberon=UBERON:0000073!4.27e-07!94;UBERON:0001016!4.27e-07!94|ontology_enrichment_uberon_v019=UBERON:0002038;2.13e-07;1!UBERON:0000941;2.13e-07;1!UBERON:0001785;2.13e-07;1!UBERON:0002464;2.13e-07;1!UBERON:0004904;2.13e-07;1!UBERON:0001021;2.13e-07;1!UBERON:0009661;2.13e-07;1!UBERON:0002950;2.13e-07;1!UBERON:0001891;2.13e-07;1!UBERON:0002346;5.53e-07;4!UBERON:0000923;5.53e-07;4!UBERON:0010316;5.53e-07;4!UBERON:0005291;5.53e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.51e-07,1;UBERON:0001785,1.51e-07,1;UBERON:0002464,1.51e-07,1;UBERON:0004904,1.51e-07,1;UBERON:0001021,1.51e-07,1;UBERON:0003902,1.51e-07,1;UBERON:0005425,1.51e-07,1;UBERON:0002038,2.83e-07,1;UBERON:0009661,2.83e-07,1;UBERON:0002950,2.83e-07,1;UBERON:0001891,2.83e-07,1;UBERON:0009616,2.83e-07,1;UBERON:0010286,2.83e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.852139206383318,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0.822335776043652,0.309706370895104,0.575384784644301,0,0,0.344745680736619,1.93645405075148,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,1.00876629594175,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.30062222588003,0.721346064882224,0.569134746787313,0.478278818186467,0,0,0,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0.50787533340481,0.1605880751037,0,0.851692475380653,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.557216921387392,0,0,0,0,0.994147647766298,0.703347082052564,0.111308705022906,0.659215496907038,2.53350489753592,0.19924798825107,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0.179736702294654,2.50629644545853,0.511572370226872,0,0,0,0,0,0,0.7812832832557,0.699679999969566,0,0.568967241427498,0.508507300585533,0.236387681767936,0.344743373241465,1.16641845353302,0.347249989866585,0,0.60298219312704,1.52581736317083,0.884634079449797,0,0,0.32681539055697,0.278847488557207,0.0769502585037971,0.113942055847001,0.23056390438806,0.359030577639089,0,0,0,0,1.02193298195737,0,0.332423363800313,0.225595660617181,0.19606253431774,0,0.189753732724185,0.635746315921515,0.421996129056054,0.326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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:153969752..153969755,+ | |||
|id=chr1:153969752..153969755,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.13e-07;1!CL:0000911;2.13e-07;1!CL:0000814;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.34e-07,1;CL:0000914,4.34e-07,1;CL:0000911,4.34e-07,1;CL:0000814,4.34e-07,1;CL:0002042,4.34e-07,1;CL:0002039,4.34e-07,1;CL:0002040,4.34e-07,1;CL:0002041,4.34e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009847;4.85e-09;3!UBERON:0003353;4.85e-09;3!UBERON:0005425;2.13e-07;1 | |||
|ontology_enrichment_disease=DOID:162!2.19e-37!235;DOID:14566!2.54e-37!239;DOID:0050687!2.78e-28!143;DOID:305!7.87e-21!106;DOID:0050686!3.67e-19!137;DOID:2531!1.58e-07!51;DOID:0060083!1.58e-07!51;DOID:171!7.40e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.04e-13;2!DOID:4556;4.85e-09;3!DOID:1749;1.85e-07;14!DOID:12603;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.49e-13,2;DOID:162,2.08e-12,235;DOID:14566,4.82e-12,239;DOID:0050687,1.57e-11,143;DOID:4556,4.32e-09,3;DOID:12603,1.83e-07,1;DOID:1749,2.00e-07,14;DOID:305,2.87e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.27e-07!94;UBERON:0001016!4.27e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.13e-07;1!UBERON:0000941;2.13e-07;1!UBERON:0001785;2.13e-07;1!UBERON:0002464;2.13e-07;1!UBERON:0004904;2.13e-07;1!UBERON:0001021;2.13e-07;1!UBERON:0009661;2.13e-07;1!UBERON:0002950;2.13e-07;1!UBERON:0001891;2.13e-07;1!UBERON:0002346;5.53e-07;4!UBERON:0000923;5.53e-07;4!UBERON:0010316;5.53e-07;4!UBERON:0005291;5.53e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.51e-07,1;UBERON:0001785,1.51e-07,1;UBERON:0002464,1.51e-07,1;UBERON:0004904,1.51e-07,1;UBERON:0001021,1.51e-07,1;UBERON:0003902,1.51e-07,1;UBERON:0005425,1.51e-07,1;UBERON:0002038,2.83e-07,1;UBERON:0009661,2.83e-07,1;UBERON:0002950,2.83e-07,1;UBERON:0001891,2.83e-07,1;UBERON:0009616,2.83e-07,1;UBERON:0010286,2.83e-07,1 | |||
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| |||
|short_description=p@chr1:153969752..153969755,+ | |||
}} |
Revision as of 00:36, 12 September 2013
Short description: | p@chr1:153969752..153969755, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:153969752..153969755, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.34e-07 | 1 |
immature NK T cell | 4.34e-07 | 1 |
effector T cell | 4.34e-07 | 1 |
mature NK T cell | 4.34e-07 | 1 |
immature NK T cell stage IV | 4.34e-07 | 1 |
immature NK T cell stage I | 4.34e-07 | 1 |
immature NK T cell stage II | 4.34e-07 | 1 |
immature NK T cell stage III | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.51e-07 | 1 |
cranial nerve | 1.51e-07 | 1 |
nerve trunk | 1.51e-07 | 1 |
nerve connecting eye with brain | 1.51e-07 | 1 |
nerve | 1.51e-07 | 1 |
retinal neural layer | 1.51e-07 | 1 |
presumptive neural retina | 1.51e-07 | 1 |
substantia nigra | 2.83e-07 | 1 |
midbrain nucleus | 2.83e-07 | 1 |
regional part of midbrain | 2.83e-07 | 1 |
midbrain | 2.83e-07 | 1 |
presumptive midbrain | 2.83e-07 | 1 |
midbrain neural tube | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.49e-13 | 2 |
cancer | 2.08e-12 | 235 |
disease of cellular proliferation | 4.82e-12 | 239 |
cell type cancer | 1.57e-11 | 143 |
lung large cell carcinoma | 4.32e-09 | 3 |
acute leukemia | 1.83e-07 | 1 |
squamous cell carcinoma | 2.00e-07 | 14 |
carcinoma | 2.87e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.