FFCP PHASE1:Hg19::chr1:201399016..201399025,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7135|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11945|TSSclassifier=S|UniProt=P19237,F6RZ19|association_with_transcript=-22bp_to_ENST00000336092,ENST00000413495,uc001gwo.1_5end|coexpression_cluster_id=C3302|description=CAGE_peak_4_at_TNNI1_5end|id=chr1:201399016..201399025,-|ontology_enrichment_celltype=CL:0000188!2.94e-37!9;CL:0000594!2.47e-10!3;CL:0000680!2.01e-08!57;CL:0000056!2.01e-08!57;CL:0000355!2.01e-08!57;CL:0000515!1.37e-07!4|ontology_enrichment_celltype_v019=CL:0000188;2.11e-20;9!CL:0000632;7.25e-08;3!CL:0000594;7.25e-08;3|ontology_enrichment_celltype_v019_2=CL:0000188,1.62e-20,9;CL:0000594,6.34e-08,3;CL:0000632,6.78e-08,3|ontology_enrichment_development_v019=UBERON:0004874;2.30e-21;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!7.85e-17!61;UBERON:0002036!7.85e-17!61;UBERON:0003082!7.85e-17!61;UBERON:0002385!3.22e-16!63;UBERON:0001015!3.22e-16!63;UBERON:0000383!3.22e-16!63;UBERON:0000341!2.05e-15!2;UBERON:0001630!3.14e-15!2;UBERON:0005090!3.14e-15!2;UBERON:0004290!2.37e-14!70;UBERON:0000486!6.81e-12!82;UBERON:0000914!1.01e-11!83;UBERON:0002329!1.01e-11!83;UBERON:0003077!1.01e-11!83;UBERON:0003059!1.01e-11!83;UBERON:0007282!1.01e-11!83;UBERON:0009618!1.01e-11!83;UBERON:0007285!1.01e-11!83;UBERON:0001042!3.04e-11!10;UBERON:0009145!3.04e-11!10;UBERON:0008814!3.29e-11!15;UBERON:0000490!3.83e-11!138;UBERON:0001723!2.05e-10!3;UBERON:0001033!2.05e-10!3;UBERON:0010056!2.05e-10!3;UBERON:0006562!3.10e-10!11;UBERON:0005256!2.18e-09!143;UBERON:0003104!7.42e-09!238;UBERON:0009142!7.42e-09!238;UBERON:0000989!1.13e-08!1;UBERON:0008811!1.13e-08!1;UBERON:0006258!1.13e-08!1;UBERON:0005876!1.13e-08!1;UBERON:0004874!1.13e-08!1;UBERON:0002426!1.22e-08!1;UBERON:0003831!1.22e-08!1;UBERON:0003898!1.22e-08!1;UBERON:0004830!1.22e-08!1;UBERON:0001774!1.22e-08!1;UBERON:0003830!1.22e-08!1;UBERON:0005175!1.22e-08!1;UBERON:0003897!1.22e-08!1;UBERON:0001103!1.22e-08!1;UBERON:0010084!1.22e-08!1;UBERON:0001301!2.33e-08!1;UBERON:0005418!2.69e-08!1;UBERON:0001389!2.69e-08!1;UBERON:0000026!2.69e-08!1;UBERON:0008784!2.69e-08!1;UBERON:0006058!2.69e-08!1;UBERON:0003663!2.69e-08!1;UBERON:0001383!2.69e-08!1;UBERON:0004256!2.69e-08!1;UBERON:0002529!2.69e-08!1;UBERON:0004708!2.69e-08!1;UBERON:0002101!2.69e-08!1;UBERON:0004709!2.69e-08!1;UBERON:0003661!2.69e-08!1;UBERON:0002471!2.69e-08!1;UBERON:0004357!2.69e-08!1;UBERON:0009872!2.69e-08!1;UBERON:0004347!2.69e-08!1;UBERON:0005420!2.69e-08!1;UBERON:0005732!2.69e-08!1;UBERON:0006057!2.69e-08!1;UBERON:0000978!2.69e-08!1;UBERON:0002103!2.69e-08!1;UBERON:0001665!2.69e-08!1;UBERON:0003823!2.69e-08!1;UBERON:0000154!2.69e-08!1;UBERON:0005733!2.69e-08!1;UBERON:0005730!2.69e-08!1;UBERON:0002372!3.10e-08!1;UBERON:0001961!3.10e-08!1;UBERON:0001744!3.10e-08!1;UBERON:0001735!3.10e-08!1;UBERON:0000974!8.21e-07!10|ontology_enrichment_uberon_v019=UBERON:0001134;2.69e-44;16!UBERON:0002036;2.69e-44;16!UBERON:0002385;2.76e-22;31!UBERON:0001015;2.76e-22;31!UBERON:0000383;2.76e-22;31!UBERON:0000989;2.30e-21;1!UBERON:0008811;2.30e-21;1!UBERON:0002426;2.30e-21;1!UBERON:0003831;2.30e-21;1!UBERON:0003898;2.30e-21;1!UBERON:0004830;2.30e-21;1!UBERON:0003830;2.30e-21;1!UBERON:0005175;2.30e-21;1!UBERON:0001774;2.30e-21;1!UBERON:0001103;2.30e-21;1!UBERON:0000341;2.23e-11;2!UBERON:0005090;2.23e-11;2!UBERON:0001630;2.23e-11;2!UBERON:0001723;7.25e-08;3!UBERON:0001033;7.25e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.30e-21,1;UBERON:0008811,2.30e-21,1;UBERON:0006258,2.30e-21,1;UBERON:0005876,2.30e-21,1;UBERON:0004874,2.30e-21,1;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0001134,1.89e-11,62;UBERON:0002036,1.89e-11,62;UBERON:0003082,1.89e-11,62;UBERON:0000341,2.02e-11,2;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0002385,4.33e-11,64;UBERON:0001015,4.33e-11,64;UBERON:0000383,4.33e-11,64;UBERON:0005256,4.65e-10,122;UBERON:0002329,5.49e-10,71;UBERON:0003059,5.49e-10,71;UBERON:0007282,5.49e-10,71;UBERON:0004290,5.49e-10,71;UBERON:0009618,5.49e-10,71;UBERON:0003077,7.58e-10,72;UBERON:0007285,7.58e-10,72;UBERON:0007524,1.04e-09,73;UBERON:0007503,4.43e-09,78;UBERON:0000486,1.59e-08,83;UBERON:0001723,7.76e-08,3;UBERON:0001033,7.76e-08,3;UBERON:0010056,7.76e-08,3;UBERON:0003104,1.46e-07,160;UBERON:0009142,1.46e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11945 | |||
|TSSclassifier=S | |||
|UniProt=P19237,F6RZ19 | |||
|association_with_transcript=-22bp_to_ENST00000336092,ENST00000413495,uc001gwo.1_5end | |||
|coexpression_cluster_id=C3302 | |||
|description=CAGE_peak_4_at_TNNI1_5end | |||
|id=chr1:201399016..201399025,- | |||
|ontology_enrichment_celltype=CL:0000188!2.94e-37!9;CL:0000594!2.47e-10!3;CL:0000680!2.01e-08!57;CL:0000056!2.01e-08!57;CL:0000355!2.01e-08!57;CL:0000515!1.37e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.11e-20;9!CL:0000632;7.25e-08;3!CL:0000594;7.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.62e-20,9;CL:0000594,6.34e-08,3;CL:0000632,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.30e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!7.85e-17!61;UBERON:0002036!7.85e-17!61;UBERON:0003082!7.85e-17!61;UBERON:0002385!3.22e-16!63;UBERON:0001015!3.22e-16!63;UBERON:0000383!3.22e-16!63;UBERON:0000341!2.05e-15!2;UBERON:0001630!3.14e-15!2;UBERON:0005090!3.14e-15!2;UBERON:0004290!2.37e-14!70;UBERON:0000486!6.81e-12!82;UBERON:0000914!1.01e-11!83;UBERON:0002329!1.01e-11!83;UBERON:0003077!1.01e-11!83;UBERON:0003059!1.01e-11!83;UBERON:0007282!1.01e-11!83;UBERON:0009618!1.01e-11!83;UBERON:0007285!1.01e-11!83;UBERON:0001042!3.04e-11!10;UBERON:0009145!3.04e-11!10;UBERON:0008814!3.29e-11!15;UBERON:0000490!3.83e-11!138;UBERON:0001723!2.05e-10!3;UBERON:0001033!2.05e-10!3;UBERON:0010056!2.05e-10!3;UBERON:0006562!3.10e-10!11;UBERON:0005256!2.18e-09!143;UBERON:0003104!7.42e-09!238;UBERON:0009142!7.42e-09!238;UBERON:0000989!1.13e-08!1;UBERON:0008811!1.13e-08!1;UBERON:0006258!1.13e-08!1;UBERON:0005876!1.13e-08!1;UBERON:0004874!1.13e-08!1;UBERON:0002426!1.22e-08!1;UBERON:0003831!1.22e-08!1;UBERON:0003898!1.22e-08!1;UBERON:0004830!1.22e-08!1;UBERON:0001774!1.22e-08!1;UBERON:0003830!1.22e-08!1;UBERON:0005175!1.22e-08!1;UBERON:0003897!1.22e-08!1;UBERON:0001103!1.22e-08!1;UBERON:0010084!1.22e-08!1;UBERON:0001301!2.33e-08!1;UBERON:0005418!2.69e-08!1;UBERON:0001389!2.69e-08!1;UBERON:0000026!2.69e-08!1;UBERON:0008784!2.69e-08!1;UBERON:0006058!2.69e-08!1;UBERON:0003663!2.69e-08!1;UBERON:0001383!2.69e-08!1;UBERON:0004256!2.69e-08!1;UBERON:0002529!2.69e-08!1;UBERON:0004708!2.69e-08!1;UBERON:0002101!2.69e-08!1;UBERON:0004709!2.69e-08!1;UBERON:0003661!2.69e-08!1;UBERON:0002471!2.69e-08!1;UBERON:0004357!2.69e-08!1;UBERON:0009872!2.69e-08!1;UBERON:0004347!2.69e-08!1;UBERON:0005420!2.69e-08!1;UBERON:0005732!2.69e-08!1;UBERON:0006057!2.69e-08!1;UBERON:0000978!2.69e-08!1;UBERON:0002103!2.69e-08!1;UBERON:0001665!2.69e-08!1;UBERON:0003823!2.69e-08!1;UBERON:0000154!2.69e-08!1;UBERON:0005733!2.69e-08!1;UBERON:0005730!2.69e-08!1;UBERON:0002372!3.10e-08!1;UBERON:0001961!3.10e-08!1;UBERON:0001744!3.10e-08!1;UBERON:0001735!3.10e-08!1;UBERON:0000974!8.21e-07!10 | |||
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|short_description=p4@TNNI1 | |||
}} |
Revision as of 02:45, 12 September 2013
Short description: | p4@TNNI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TNNI1_5end |
Coexpression cluster: | C3302_Skeletal_diaphragm_skeletal_penis_throat_tongue_epididymis |
Association with transcript: | -22bp_to_ENST00000336092, ENST00000413495, uc001gwo.1_5end |
EntrezGene: | TNNI1 |
HGNC: | 11945 |
UniProt: | P19237F6RZ19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.62e-20 | 9 |
skeletal muscle satellite cell | 6.34e-08 | 3 |
hepatic stellate cell | 6.78e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.