FFCP PHASE1:Hg19::chr1:203055129..203055147,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4656|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7612|TSSclassifier=S|UniProt=P15173|association_with_transcript=16bp_to_ENST00000241651_5end|coexpression_cluster_id=C480|description=CAGE_peak_1_at_MYOG_5end|id=chr1:203055129..203055147,-|ontology_enrichment_celltype=CL:0000188!2.10e-18!9;CL:0000594!1.08e-08!3;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0002590!9.46e-08!3;CL:0002603!2.45e-07!3;CL:0000183!3.84e-07!59;CL:0002540!7.09e-07!6;CL:0000055!8.68e-07!180|ontology_enrichment_celltype_v019=CL:0000188;7.29e-27;9!CL:0000680;9.66e-19;7!CL:0000594;3.58e-12;3!CL:0000515;1.51e-11;3!CL:0002540;9.70e-10;6!CL:0002575;8.33e-09;2!CL:0000056;9.08e-09;4|ontology_enrichment_celltype_v019_2=CL:0000188,7.30e-27,9;CL:0000594,3.59e-12,3;CL:0000680,4.89e-11,58;CL:0000056,4.89e-11,58;CL:0000355,4.89e-11,58;CL:0002540,8.63e-10,6;CL:0002575,8.49e-09,2;CL:0000515,1.04e-08,4;CL:0000187,2.34e-07,55|ontology_enrichment_development_v019=CL:0000515;9.08e-09;4!CL:0000355;1.24e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!5.32e-13!61;UBERON:0002036!5.32e-13!61;UBERON:0003082!5.32e-13!61;UBERON:0002385!2.10e-12!63;UBERON:0001015!2.10e-12!63;UBERON:0000383!2.10e-12!63;UBERON:0004290!1.02e-11!70;UBERON:0000914!5.96e-11!83;UBERON:0002329!5.96e-11!83;UBERON:0003077!5.96e-11!83;UBERON:0003059!5.96e-11!83;UBERON:0007282!5.96e-11!83;UBERON:0009618!5.96e-11!83;UBERON:0007285!5.96e-11!83;UBERON:0000486!3.99e-10!82;UBERON:0005256!3.09e-08!143;UBERON:0003104!3.70e-08!238;UBERON:0009142!3.70e-08!238;UBERON:0001042!4.14e-08!10;UBERON:0009145!4.14e-08!10;UBERON:0000490!2.11e-07!138;UBERON:0000481!2.38e-07!347;UBERON:0006562!2.66e-07!11;UBERON:0008814!6.30e-07!15|ontology_enrichment_uberon_v019=UBERON:0001134;3.73e-51;16!UBERON:0002036;3.73e-51;16!UBERON:0002385;4.13e-24;31!UBERON:0001015;4.13e-24;31!UBERON:0000383;4.13e-24;31!UBERON:0005090;7.57e-09;2!UBERON:0001630;7.57e-09;2!UBERON:0000341;8.82e-09;2!UBERON:0003127;2.38e-08;2!UBERON:0002204;2.95e-08;70|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.31e-17,62;UBERON:0002036,2.31e-17,62;UBERON:0003082,2.31e-17,62;UBERON:0002385,1.14e-16,64;UBERON:0001015,1.14e-16,64;UBERON:0000383,1.14e-16,64;UBERON:0002329,1.48e-14,71;UBERON:0003059,1.48e-14,71;UBERON:0007282,1.48e-14,71;UBERON:0004290,1.48e-14,71;UBERON:0009618,1.48e-14,71;UBERON:0003077,2.73e-14,72;UBERON:0007285,2.73e-14,72;UBERON:0007524,4.98e-14,73;UBERON:0007503,7.87e-13,78;UBERON:0000486,8.87e-12,83;UBERON:0005256,1.53e-09,122;UBERON:0005090,7.58e-09,2;UBERON:0001630,7.58e-09,2;UBERON:0000341,8.82e-09,2;UBERON:0002204,1.62e-08,167;UBERON:0003127,2.34e-08,2;UBERON:0000490,9.85e-08,148;UBERON:0003104,7.70e-07,160;UBERON:0009142,7.70e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,1.02000345622126,1.88072832886853,0,0,0,0,0,0,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.625592599359821,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,161.709582524096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4511923734118,2.05476322550383,5.01370697071708,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00136416847742,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,6.65723935373318,844.819109422327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,247.477038827832,26.6504107608335,64.7785507344267,105.58281452315,4.0819693049944,32.9187895185299,98.9481144300931,346.156554594515,0,0,0,0,0,0,0,0,0,0,0,0,4.46590043231601,2.84741482246853,0.190630193923825,0,0,0,0,0.539617372749944,0,0,0,0,0,6.82687234725426,0,0,0,0,0,0,0,0,0,0,0,2.78841148289775,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,2.07875276582847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.9701247217201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,1.06687918137261,0,11.9769792613682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4656 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7612 | |||
|TSSclassifier=S | |||
|UniProt=P15173 | |||
|association_with_transcript=16bp_to_ENST00000241651_5end | |||
|coexpression_cluster_id=C480 | |||
|description=CAGE_peak_1_at_MYOG_5end | |||
|id=chr1:203055129..203055147,- | |||
|ontology_enrichment_celltype=CL:0000188!2.10e-18!9;CL:0000594!1.08e-08!3;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0002590!9.46e-08!3;CL:0002603!2.45e-07!3;CL:0000183!3.84e-07!59;CL:0002540!7.09e-07!6;CL:0000055!8.68e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000188;7.29e-27;9!CL:0000680;9.66e-19;7!CL:0000594;3.58e-12;3!CL:0000515;1.51e-11;3!CL:0002540;9.70e-10;6!CL:0002575;8.33e-09;2!CL:0000056;9.08e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,7.30e-27,9;CL:0000594,3.59e-12,3;CL:0000680,4.89e-11,58;CL:0000056,4.89e-11,58;CL:0000355,4.89e-11,58;CL:0002540,8.63e-10,6;CL:0002575,8.49e-09,2;CL:0000515,1.04e-08,4;CL:0000187,2.34e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000515;9.08e-09;4!CL:0000355;1.24e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!5.32e-13!61;UBERON:0002036!5.32e-13!61;UBERON:0003082!5.32e-13!61;UBERON:0002385!2.10e-12!63;UBERON:0001015!2.10e-12!63;UBERON:0000383!2.10e-12!63;UBERON:0004290!1.02e-11!70;UBERON:0000914!5.96e-11!83;UBERON:0002329!5.96e-11!83;UBERON:0003077!5.96e-11!83;UBERON:0003059!5.96e-11!83;UBERON:0007282!5.96e-11!83;UBERON:0009618!5.96e-11!83;UBERON:0007285!5.96e-11!83;UBERON:0000486!3.99e-10!82;UBERON:0005256!3.09e-08!143;UBERON:0003104!3.70e-08!238;UBERON:0009142!3.70e-08!238;UBERON:0001042!4.14e-08!10;UBERON:0009145!4.14e-08!10;UBERON:0000490!2.11e-07!138;UBERON:0000481!2.38e-07!347;UBERON:0006562!2.66e-07!11;UBERON:0008814!6.30e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.73e-51;16!UBERON:0002036;3.73e-51;16!UBERON:0002385;4.13e-24;31!UBERON:0001015;4.13e-24;31!UBERON:0000383;4.13e-24;31!UBERON:0005090;7.57e-09;2!UBERON:0001630;7.57e-09;2!UBERON:0000341;8.82e-09;2!UBERON:0003127;2.38e-08;2!UBERON:0002204;2.95e-08;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.31e-17,62;UBERON:0002036,2.31e-17,62;UBERON:0003082,2.31e-17,62;UBERON:0002385,1.14e-16,64;UBERON:0001015,1.14e-16,64;UBERON:0000383,1.14e-16,64;UBERON:0002329,1.48e-14,71;UBERON:0003059,1.48e-14,71;UBERON:0007282,1.48e-14,71;UBERON:0004290,1.48e-14,71;UBERON:0009618,1.48e-14,71;UBERON:0003077,2.73e-14,72;UBERON:0007285,2.73e-14,72;UBERON:0007524,4.98e-14,73;UBERON:0007503,7.87e-13,78;UBERON:0000486,8.87e-12,83;UBERON:0005256,1.53e-09,122;UBERON:0005090,7.58e-09,2;UBERON:0001630,7.58e-09,2;UBERON:0000341,8.82e-09,2;UBERON:0002204,1.62e-08,167;UBERON:0003127,2.34e-08,2;UBERON:0000490,9.85e-08,148;UBERON:0003104,7.70e-07,160;UBERON:0009142,7.70e-07,160 | |||
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|short_description=p1@MYOG | |||
}} |
Revision as of 02:52, 12 September 2013
Short description: | p1@MYOG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYOG_5end |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | 16bp_to_ENST00000241651_5end |
EntrezGene: | MYOG |
HGNC: | 7612 |
UniProt: | P15173 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.30e-27 | 9 |
skeletal muscle satellite cell | 3.59e-12 | 3 |
muscle precursor cell | 4.89e-11 | 58 |
myoblast | 4.89e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-11 | 58 |
mesenchymal stem cell of the bone marrow | 8.63e-10 | 6 |
central nervous system pericyte | 8.49e-09 | 2 |
skeletal muscle myoblast | 1.04e-08 | 4 |
muscle cell | 2.34e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.31e-17 | 62 |
striated muscle tissue | 2.31e-17 | 62 |
myotome | 2.31e-17 | 62 |
muscle tissue | 1.14e-16 | 64 |
musculature | 1.14e-16 | 64 |
musculature of body | 1.14e-16 | 64 |
somite | 1.48e-14 | 71 |
presomitic mesoderm | 1.48e-14 | 71 |
presumptive segmental plate | 1.48e-14 | 71 |
dermomyotome | 1.48e-14 | 71 |
trunk paraxial mesoderm | 1.48e-14 | 71 |
paraxial mesoderm | 2.73e-14 | 72 |
presumptive paraxial mesoderm | 2.73e-14 | 72 |
dense mesenchyme tissue | 4.98e-14 | 73 |
epithelial vesicle | 7.87e-13 | 78 |
multilaminar epithelium | 8.87e-12 | 83 |
trunk mesenchyme | 1.53e-09 | 122 |
muscle structure | 7.58e-09 | 2 |
muscle organ | 7.58e-09 | 2 |
throat | 8.82e-09 | 2 |
musculoskeletal system | 1.62e-08 | 167 |
open tracheal system trachea | 2.34e-08 | 2 |
unilaminar epithelium | 9.85e-08 | 148 |
mesenchyme | 7.70e-07 | 160 |
entire embryonic mesenchyme | 7.70e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.