FFCP PHASE1:Hg19::chr20:36170693..36170698,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:36170693..36170698,-|id=chr20:36170693..36170698,-|ontology_enrichment_celltype=CL:0002541!5.37e-19!3|ontology_enrichment_celltype_v019=CL:0002541;1.09e-44;3!CL:0002231;2.74e-12;3!CL:0000349;5.83e-08;19|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-44,3;CL:0002231,3.24e-12,3;CL:0000349,5.94e-08,19|ontology_enrichment_development_v019=UBERON:0009847;1.85e-12;3!UBERON:0003353;1.85e-12;3|ontology_enrichment_disease=DOID:6193!6.49e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!5.37e-19!3;UBERON:0000920!5.37e-19!3;UBERON:0003124!4.16e-14!7;UBERON:0001046!1.13e-10!19;UBERON:0005631!1.50e-10!14;UBERON:0000158!1.50e-10!14;UBERON:0000162!6.69e-07!14;UBERON:0001353!6.69e-07!14;UBERON:0000163!6.69e-07!14;UBERON:0006866!6.69e-07!14;UBERON:0000164!6.69e-07!14;UBERON:0000931!6.69e-07!14;UBERON:0001052!7.53e-07!4|ontology_enrichment_uberon_v019=UBERON:0003124;1.09e-44;3!UBERON:0000920;1.09e-44;3!UBERON:0005631;3.14e-14;10!UBERON:0000158;3.14e-14;10!UBERON:0002367;4.66e-13;11!UBERON:0010147;4.66e-13;11!UBERON:0003937;4.67e-12;12!UBERON:0005399;4.67e-12;12!UBERON:0003101;5.17e-07;22!UBERON:0000079;5.17e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-44,3;UBERON:0003124,7.84e-20,7;UBERON:0002367,5.10e-13,11;UBERON:0010147,5.10e-13,11;UBERON:0009846,5.10e-13,11;UBERON:0003353,5.10e-13,11;UBERON:0004902,5.10e-13,11;UBERON:0003820,5.10e-13,11;UBERON:0009847,5.10e-13,11;UBERON:0003937,5.08e-12,12;UBERON:0005399,5.08e-12,12;UBERON:0000162,1.90e-10,14;UBERON:0005631,1.90e-10,14;UBERON:0000158,1.90e-10,14;UBERON:0001353,1.90e-10,14;UBERON:0000163,1.90e-10,14;UBERON:0006866,1.90e-10,14;UBERON:0000164,1.90e-10,14;UBERON:0000931,1.90e-10,14;UBERON:0004122,8.10e-10,15;UBERON:0001046,5.94e-08,19;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,1.09917112082235,3.73124343213044,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0,0,0,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,5.00541308514311,0.235479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:36170693..36170698,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:36170693..36170698,- | |||
|id=chr20:36170693..36170698,- | |||
|ontology_enrichment_celltype=CL:0002541!5.37e-19!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.09e-44;3!CL:0002231;2.74e-12;3!CL:0000349;5.83e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-44,3;CL:0002231,3.24e-12,3;CL:0000349,5.94e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.85e-12;3!UBERON:0003353;1.85e-12;3 | |||
|ontology_enrichment_disease=DOID:6193!6.49e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!5.37e-19!3;UBERON:0000920!5.37e-19!3;UBERON:0003124!4.16e-14!7;UBERON:0001046!1.13e-10!19;UBERON:0005631!1.50e-10!14;UBERON:0000158!1.50e-10!14;UBERON:0000162!6.69e-07!14;UBERON:0001353!6.69e-07!14;UBERON:0000163!6.69e-07!14;UBERON:0006866!6.69e-07!14;UBERON:0000164!6.69e-07!14;UBERON:0000931!6.69e-07!14;UBERON:0001052!7.53e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.09e-44;3!UBERON:0000920;1.09e-44;3!UBERON:0005631;3.14e-14;10!UBERON:0000158;3.14e-14;10!UBERON:0002367;4.66e-13;11!UBERON:0010147;4.66e-13;11!UBERON:0003937;4.67e-12;12!UBERON:0005399;4.67e-12;12!UBERON:0003101;5.17e-07;22!UBERON:0000079;5.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-44,3;UBERON:0003124,7.84e-20,7;UBERON:0002367,5.10e-13,11;UBERON:0010147,5.10e-13,11;UBERON:0009846,5.10e-13,11;UBERON:0003353,5.10e-13,11;UBERON:0004902,5.10e-13,11;UBERON:0003820,5.10e-13,11;UBERON:0009847,5.10e-13,11;UBERON:0003937,5.08e-12,12;UBERON:0005399,5.08e-12,12;UBERON:0000162,1.90e-10,14;UBERON:0005631,1.90e-10,14;UBERON:0000158,1.90e-10,14;UBERON:0001353,1.90e-10,14;UBERON:0000163,1.90e-10,14;UBERON:0006866,1.90e-10,14;UBERON:0000164,1.90e-10,14;UBERON:0000931,1.90e-10,14;UBERON:0004122,8.10e-10,15;UBERON:0001046,5.94e-08,19;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,1.09917112082235,3.73124343213044,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0,0,0,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,5.00541308514311,0.235479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:36170693..36170698,- | |||
}} |
Revision as of 08:23, 12 September 2013
Short description: | p@chr20:36170693..36170698, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:36170693..36170698, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-44 | 3 |
epithelial cell of prostate | 3.24e-12 | 3 |
extraembryonic cell | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.22e-44 | 3 |
chorion | 7.84e-20 | 7 |
prostate gland | 5.10e-13 | 11 |
male accessory sex gland | 5.10e-13 | 11 |
embryonic cloacal epithelium | 5.10e-13 | 11 |
epithelium of hindgut | 5.10e-13 | 11 |
urogenital sinus epithelium | 5.10e-13 | 11 |
prostate bud | 5.10e-13 | 11 |
prostate field | 5.10e-13 | 11 |
sex gland | 5.08e-12 | 12 |
male reproductive gland | 5.08e-12 | 12 |
cloaca | 1.90e-10 | 14 |
extraembryonic membrane | 1.90e-10 | 14 |
membranous layer | 1.90e-10 | 14 |
anal region | 1.90e-10 | 14 |
embryonic cloaca | 1.90e-10 | 14 |
terminal part of digestive tract | 1.90e-10 | 14 |
primitive urogenital sinus | 1.90e-10 | 14 |
proctodeum | 1.90e-10 | 14 |
genitourinary system | 8.10e-10 | 15 |
hindgut | 5.94e-08 | 19 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.