FFCP PHASE1:Hg19::chr21:10597511..10597538,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-69bp_to_uc011abv.1_5end|description=CAGE_peak_1_at_uc011abv.1_5end|id=chr21:10597511..10597538,-|ontology_enrichment_celltype=CL:0000039!3.15e-22!7;CL:0000586!3.15e-22!7|ontology_enrichment_celltype_v019=CL:0000039;1.15e-42;7!CL:0000586;1.15e-42;7!CL:0000333;9.92e-08;5|ontology_enrichment_celltype_v019_2=CL:0000039,9.23e-43,7;CL:0000586,9.23e-43,7|ontology_enrichment_development_v019=UBERON:0009117;1.14e-20;10!UBERON:0005564;1.14e-20;10|ontology_enrichment_disease=DOID:3095!2.02e-18!22;DOID:2994!2.02e-18!22;DOID:1036!6.40e-10!8;DOID:162!1.57e-08!235;DOID:14566!3.57e-08!239|ontology_enrichment_disease_v019=DOID:3095;1.95e-23;22!DOID:2994;1.95e-23;22!DOID:1036;5.16e-17;8!DOID:0060085;5.79e-10;1!DOID:3165;5.79e-10;1!DOID:0060121;5.79e-10;1!DOID:2438;5.79e-10;1!DOID:4418;5.79e-10;1!DOID:1799;1.99e-09;1!DOID:10165;1.99e-09;1!DOID:1798;1.99e-09;1!DOID:8692;8.52e-07;31|ontology_enrichment_disease_v019_2=DOID:3095,1.76e-23,22;DOID:2994,1.76e-23,22;DOID:1036,5.05e-17,8;DOID:162,3.05e-12,235;DOID:14566,6.49e-12,239;DOID:0060085,5.79e-10,1;DOID:3165,5.79e-10,1;DOID:0060121,5.79e-10,1;DOID:2438,5.79e-10,1;DOID:4418,5.79e-10,1;DOID:1799,2.46e-09,1;DOID:10165,2.46e-09,1;DOID:1798,2.46e-09,1;DOID:0050687,4.97e-09,143|ontology_enrichment_uberon=UBERON:0000473!3.93e-14!8;UBERON:0003135!4.68e-10!11|ontology_enrichment_uberon_v019=UBERON:0000473;7.59e-26;8!UBERON:0003135;8.73e-19;11!UBERON:0001282;4.09e-10;1!UBERON:0009842;4.09e-10;1!UBERON:0003704;4.09e-10;1!UBERON:0001171;4.09e-10;1!UBERON:0001172;4.09e-10;1!UBERON:0000991;8.83e-10;21!UBERON:0003101;2.50e-09;22!UBERON:0000079;2.50e-09;22!UBERON:0000013;9.92e-08;5!UBERON:0002410;9.92e-08;5!UBERON:0002323;6.38e-07;45|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.17e-26,8;UBERON:0003135,7.52e-19,11;UBERON:0001282,4.09e-10,1;UBERON:0009842,4.09e-10,1;UBERON:0003704,4.09e-10,1;UBERON:0001171,4.09e-10,1;UBERON:0001172,4.09e-10,1;UBERON:0000991,8.19e-10,21;UBERON:0009196,8.19e-10,21;UBERON:0009117,8.19e-10,21;UBERON:0005564,8.19e-10,21;UBERON:0004176,2.33e-09,22;UBERON:0003101,2.33e-09,22;UBERON:0000079,2.33e-09,22;UBERON:0002323,3.86e-08,46;UBERON:0000013,9.76e-08,5;UBERON:0002410,9.76e-08,5;UBERON:0004458,1.36e-07,49;UBERON:0003886,8.08e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,8.77353830021909,2.3056390438806,7.27036919719154,1.4124158349861,0,0,0.533034776018635,0,0,0,4.51191321234361,3.13700054908383,6.04157713113034,1.89753732724185,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,6.35886757449567,0.0633107959558787,0,22.4444696704294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.499921631848426,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,6.65050730778989,0,0,3.60391806033646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,3.63069123666336,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0.266107110487916,0,0,0,0,0,0,0,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74303141539369,0,0,0,1.31928620094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.98339014767326,0.886889507080059,2.85568723277549,0.534434810531121,7.90296135999666,4.76344324655513,1.36401656792831,1.87574891109325,0,0,0,0,0.0645889098360061,0,1.00918676322552,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@uc011abv.1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-69bp_to_uc011abv.1_5end | |||
|description=CAGE_peak_1_at_uc011abv.1_5end | |||
|id=chr21:10597511..10597538,- | |||
|ontology_enrichment_celltype=CL:0000039!3.15e-22!7;CL:0000586!3.15e-22!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.15e-42;7!CL:0000586;1.15e-42;7!CL:0000333;9.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.23e-43,7;CL:0000586,9.23e-43,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.14e-20;10!UBERON:0005564;1.14e-20;10 | |||
|ontology_enrichment_disease=DOID:3095!2.02e-18!22;DOID:2994!2.02e-18!22;DOID:1036!6.40e-10!8;DOID:162!1.57e-08!235;DOID:14566!3.57e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.95e-23;22!DOID:2994;1.95e-23;22!DOID:1036;5.16e-17;8!DOID:0060085;5.79e-10;1!DOID:3165;5.79e-10;1!DOID:0060121;5.79e-10;1!DOID:2438;5.79e-10;1!DOID:4418;5.79e-10;1!DOID:1799;1.99e-09;1!DOID:10165;1.99e-09;1!DOID:1798;1.99e-09;1!DOID:8692;8.52e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.76e-23,22;DOID:2994,1.76e-23,22;DOID:1036,5.05e-17,8;DOID:162,3.05e-12,235;DOID:14566,6.49e-12,239;DOID:0060085,5.79e-10,1;DOID:3165,5.79e-10,1;DOID:0060121,5.79e-10,1;DOID:2438,5.79e-10,1;DOID:4418,5.79e-10,1;DOID:1799,2.46e-09,1;DOID:10165,2.46e-09,1;DOID:1798,2.46e-09,1;DOID:0050687,4.97e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.93e-14!8;UBERON:0003135!4.68e-10!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.59e-26;8!UBERON:0003135;8.73e-19;11!UBERON:0001282;4.09e-10;1!UBERON:0009842;4.09e-10;1!UBERON:0003704;4.09e-10;1!UBERON:0001171;4.09e-10;1!UBERON:0001172;4.09e-10;1!UBERON:0000991;8.83e-10;21!UBERON:0003101;2.50e-09;22!UBERON:0000079;2.50e-09;22!UBERON:0000013;9.92e-08;5!UBERON:0002410;9.92e-08;5!UBERON:0002323;6.38e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.17e-26,8;UBERON:0003135,7.52e-19,11;UBERON:0001282,4.09e-10,1;UBERON:0009842,4.09e-10,1;UBERON:0003704,4.09e-10,1;UBERON:0001171,4.09e-10,1;UBERON:0001172,4.09e-10,1;UBERON:0000991,8.19e-10,21;UBERON:0009196,8.19e-10,21;UBERON:0009117,8.19e-10,21;UBERON:0005564,8.19e-10,21;UBERON:0004176,2.33e-09,22;UBERON:0003101,2.33e-09,22;UBERON:0000079,2.33e-09,22;UBERON:0002323,3.86e-08,46;UBERON:0000013,9.76e-08,5;UBERON:0002410,9.76e-08,5;UBERON:0004458,1.36e-07,49;UBERON:0003886,8.08e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,8.77353830021909,2.3056390438806,7.27036919719154,1.4124158349861,0,0,0.533034776018635,0,0,0,4.51191321234361,3.13700054908383,6.04157713113034,1.89753732724185,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,6.35886757449567,0.0633107959558787,0,22.4444696704294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.499921631848426,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,6.65050730778989,0,0,3.60391806033646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,3.63069123666336,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0.266107110487916,0,0,0,0,0,0,0,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74303141539369,0,0,0,1.31928620094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.98339014767326,0.886889507080059,2.85568723277549,0.534434810531121,7.90296135999666,4.76344324655513,1.36401656792831,1.87574891109325,0,0,0,0,0.0645889098360061,0,1.00918676322552,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@uc011abv.1 | |||
}} |
Revision as of 09:46, 12 September 2013
Short description: | p1@uc011abv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc011abv.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_uc011abv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.23e-43 | 7 |
germ cell | 9.23e-43 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.17e-26 | 8 |
male reproductive organ | 7.52e-19 | 11 |
intralobular bile duct | 4.09e-10 | 1 |
acinus | 4.09e-10 | 1 |
intrahepatic bile duct | 4.09e-10 | 1 |
portal lobule | 4.09e-10 | 1 |
hepatic acinus | 4.09e-10 | 1 |
gonad | 8.19e-10 | 21 |
indifferent external genitalia | 8.19e-10 | 21 |
indifferent gonad | 8.19e-10 | 21 |
gonad primordium | 8.19e-10 | 21 |
external genitalia | 2.33e-09 | 22 |
male organism | 2.33e-09 | 22 |
male reproductive system | 2.33e-09 | 22 |
body cavity | 3.86e-08 | 46 |
sympathetic nervous system | 9.76e-08 | 5 |
autonomic nervous system | 9.76e-08 | 5 |
body cavity or lining | 1.36e-07 | 49 |
body cavity precursor | 8.08e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.76e-23 | 22 |
germ cell cancer | 1.76e-23 | 22 |
chronic leukemia | 5.05e-17 | 8 |
cancer | 3.05e-12 | 235 |
disease of cellular proliferation | 6.49e-12 | 239 |
organ system benign neoplasm | 5.79e-10 | 1 |
skin benign neoplasm | 5.79e-10 | 1 |
integumentary system benign neoplasm | 5.79e-10 | 1 |
dermis tumor | 5.79e-10 | 1 |
cutaneous fibrous histiocytoma | 5.79e-10 | 1 |
islet cell tumor | 2.46e-09 | 1 |
endocrine pancreas cancer | 2.46e-09 | 1 |
pancreatic endocrine carcinoma | 2.46e-09 | 1 |
cell type cancer | 4.97e-09 | 143 |
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