FFCP PHASE1:Hg19::chr2:122287909..122287973,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17088|TSSclassifier=W|UniProt=|association_with_transcript=347bp_to_ENST00000485112_5end|description=CAGE_peak_3_at_CLASP1_5end|id=chr2:122287909..122287973,-|ontology_enrichment_celltype=CL:0000066!4.76e-09!254;CL:0000220!2.53e-08!246;CL:0002321!3.79e-08!248|ontology_enrichment_celltype_v019=CL:0002076;7.49e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-07,253;CL:0002321,1.49e-07,250;CL:0002076,1.59e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.43e-08!123;UBERON:0000475!1.33e-07!365;UBERON:0004121!1.51e-07!169;UBERON:0000153!3.11e-07!129;UBERON:0007811!3.11e-07!129;UBERON:0000924!9.83e-07!173;UBERON:0006601!9.83e-07!173|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.88e-07,171;UBERON:0000924,6.88e-07,171;UBERON:0006601,6.88e-07,171|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,1.0007329835313,0,0.872338524100369,0,1.26343974685366,0,0.491467873003018,0.697801167972428,2.18441372130172,1.58260186937072,1.23766352960047,0.994192127183747,0,0,1.46062018077475,0.975865597581014,0.61560529038394,0.816002764977012,0.313454721478088,0.286235987131057,2.46373965131192,2.38531015230125,2.8272960126742,3.36612416744778,3.46327437780189,0,0,0.154816123316076,0,1.204823675113,2.21852406100073,0.46480320348181,0.710846162437108,0.880801318004542,0,1.00272223735071,0.434021741431704,0.447830948479849,0.32389366601898,0.257575567634187,0.581592955118259,0,0.727752183563449,0,0,0.929119112685311,0,0,0,0,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0.422510572623884,0.425208599930087,0,0.22465726229299,0.300353785683013,0,0,0,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,1.32208974556972,0,1.1384259382189,1.17447437874188,0,0,1.12101712596307,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0,0,0,0.512365278902701,0.260118695119756,0.657751618414705,0.552700035571697,0,0.14828656316206,0.535081656179426,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.289648807765598,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0.144846518960824,0.795285947051099,0,1.79616152611729,1.77383517970051,2.45937399940753,0.392937226493138,1.45718115317017,0.370784442784429,1.9472843619281,0.870648686496336,1.06366368415092,0,0,0,1.39133685156694,0,0.347140501607594,2.26123176769604,0,0.275118041940067,0.835979866147242,0.775250277507987,1.06729878806013,1.67360306382335,1.20848795132744,0,0.24406205754817,1.10298924103761,0.81014194788176,1.60739510911344,0.673588117878509,0.900891843866578,1.53316637465883,0.949265659568129,0.916008719652036,0,0,2.61656431285521,0.496971951695318,1.64619665163954,1.32409180813219,2.58152958673932,0.709336764396714,1.12135520028461,0,1.2333377420858,0.311211035399766,0.942974704487816,0.980771418680752,0.454072282934794,0.576175924479999,0.70296429550139,0.624320153660641,2.85235910772225,1.04614076386261,0.704606991862589,1.29498355494505,2.24721290723598,3.26646674007829,0.982674538494144,1.03325781175765,1.18800285728205,0,0.910161361938026,0,1.5150250255866,1.12606667884768,2.49357703935765,0.438977620880838,0,0.300476117813194,1.70148274740032,1.07633781413317,1.2813443329114,1.27159140695737,1.80054657650641,1.33968288009971,1.03056216018252,0.744467425326359,1.85653965465393,0.974370051611986,1.51460264546469,1.19664868234989,0.161646056818812,0.710019185033229,0.302256294682921,0.508681776931463,2.31913023795956,3.81844568827169,3.72845974005705,0.487894824518382,0.397589304964456,0.116193942869518,0.518305275076852,0.252320850875628,0.72995471815166,0,0,1.38134921352481,1.39310378409594,2.16563844500876,1.18306800039844,1.34867752062481,0.482022059766964,0.441175890929576,0.435758888184812,0.949082476444386,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0.983907508344908,0.686271241194102,2.74375713521564,6.74410519545717,0.703702806881416,2.4998880192803,0.325808305310325,1.03993478527958,0,1.04337364477569,2.34817388471643,1.44366447761074,0.462985512576611,0.380508304469197,0.790204397959275,1.71697232418975,0,1.40402559083543,0.594524649154913,1.87467667973554,3.02367830757947,3.54437743105966,5.10483579406235,5.23141089325132,4.98397482914775,0.985326475791887,0.968532774145487,1.03664057770386,0.576479813667846,0.25248486685276,0.507983154337352,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0.285826432630578,1.00917975910825,1.30788020649984,1.3200891447771,3.87815147273333,0,1.690605505112,0.531876233169741,1.04007436911366,1.54324424557285,2.83698264046557,1.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17088 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=347bp_to_ENST00000485112_5end | |||
|description=CAGE_peak_3_at_CLASP1_5end | |||
|id=chr2:122287909..122287973,- | |||
|ontology_enrichment_celltype=CL:0000066!4.76e-09!254;CL:0000220!2.53e-08!246;CL:0002321!3.79e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.49e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-07,253;CL:0002321,1.49e-07,250;CL:0002076,1.59e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.43e-08!123;UBERON:0000475!1.33e-07!365;UBERON:0004121!1.51e-07!169;UBERON:0000153!3.11e-07!129;UBERON:0007811!3.11e-07!129;UBERON:0000924!9.83e-07!173;UBERON:0006601!9.83e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.88e-07,171;UBERON:0000924,6.88e-07,171;UBERON:0006601,6.88e-07,171 | |||
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| |||
|short_description=p3@CLASP1 | |||
}} |
Revision as of 13:19, 12 September 2013
Short description: | p3@CLASP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CLASP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 347bp_to_ENST00000485112_5end |
EntrezGene: | CLASP1 |
HGNC: | 17088 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-07 | 253 |
embryonic cell | 1.49e-07 | 250 |
endo-epithelial cell | 1.59e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.88e-07 | 171 |
ectoderm | 6.88e-07 | 171 |
presumptive ectoderm | 6.88e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.