FFCP PHASE1:Mm9::chr10:110608435..110608438,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:110608435..110608438,-|id=chr10:110608435..110608438,-|ontology_enrichment_celltype=CL:0000624!3.18e-16!8;CL:0000791!2.05e-14!9;CL:0000789!2.05e-14!9;CL:0002420!2.05e-14!9;CL:0002419!2.05e-14!9;CL:0000790!2.05e-14!9;CL:0000893!4.91e-14!6;CL:0002489!4.91e-14!6;CL:0000898!4.91e-14!6;CL:0000809!4.91e-14!6;CL:0000810!4.91e-14!6;CL:0000895!4.91e-14!6;CL:0000808!4.91e-14!6;CL:0000894!4.91e-14!6;CL:0000806!4.91e-14!6;CL:0000807!4.91e-14!6;CL:0000805!4.91e-14!6;CL:0002425!4.91e-14!6;CL:0002436!4.91e-14!6;CL:0002427!4.91e-14!6;CL:0002428!4.91e-14!6;CL:0002429!4.91e-14!6;CL:0002433!4.91e-14!6;CL:0002431!4.91e-14!6;CL:0002432!4.91e-14!6;CL:0000084!8.85e-12!11;CL:0000827!8.85e-12!11;CL:0000838!8.65e-11!12;CL:0000542!5.97e-10!13;CL:0000051!5.97e-10!13;CL:0000738!1.41e-07!17;CL:0002087!1.41e-07!17;CL:0000988!3.16e-07!32;CL:0002032!3.16e-07!32;CL:0000037!3.16e-07!32;CL:0000566!3.16e-07!32;CL:0000837!3.16e-07!32;CL:0002031!4.78e-07!25|ontology_enrichment_celltype_v019_2=CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0000355,4.95e-13,9|ontology_enrichment_disease=DOID:0060100!6.51e-17!3;DOID:4045!6.51e-17!3;DOID:0050686!1.01e-08!6|ontology_enrichment_disease_v019_2=DOID:0060100,2.10e-37,3;DOID:4045,2.10e-37,3;DOID:0050686,3.74e-19,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.95e-13,9;UBERON:0002036,4.95e-13,9;UBERON:0002385,4.95e-13,9;UBERON:0000486,4.95e-13,9;UBERON:0007503,4.95e-13,9;UBERON:0001015,4.95e-13,9;UBERON:0002329,4.95e-13,9;UBERON:0003082,4.95e-13,9;UBERON:0003059,4.95e-13,9;UBERON:0007282,4.95e-13,9;UBERON:0004290,4.95e-13,9;UBERON:0009618,4.95e-13,9;UBERON:0000383,8.39e-12,10;UBERON:0007524,8.54e-11,11;UBERON:0003077,8.54e-11,11;UBERON:0007285,8.54e-11,11|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.140788722151667,0.70219357896598,0,0,0.513602189793617,0.611942816932982,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,1.5626706890476,2.09409497589519,8.82347232046521,6.83045484958446,5.34061388334269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:110608435..110608438,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:110608435..110608438,- | |||
|id=chr10:110608435..110608438,- | |||
|ontology_enrichment_celltype=CL:0000624!3.18e-16!8;CL:0000791!2.05e-14!9;CL:0000789!2.05e-14!9;CL:0002420!2.05e-14!9;CL:0002419!2.05e-14!9;CL:0000790!2.05e-14!9;CL:0000893!4.91e-14!6;CL:0002489!4.91e-14!6;CL:0000898!4.91e-14!6;CL:0000809!4.91e-14!6;CL:0000810!4.91e-14!6;CL:0000895!4.91e-14!6;CL:0000808!4.91e-14!6;CL:0000894!4.91e-14!6;CL:0000806!4.91e-14!6;CL:0000807!4.91e-14!6;CL:0000805!4.91e-14!6;CL:0002425!4.91e-14!6;CL:0002436!4.91e-14!6;CL:0002427!4.91e-14!6;CL:0002428!4.91e-14!6;CL:0002429!4.91e-14!6;CL:0002433!4.91e-14!6;CL:0002431!4.91e-14!6;CL:0002432!4.91e-14!6;CL:0000084!8.85e-12!11;CL:0000827!8.85e-12!11;CL:0000838!8.65e-11!12;CL:0000542!5.97e-10!13;CL:0000051!5.97e-10!13;CL:0000738!1.41e-07!17;CL:0002087!1.41e-07!17;CL:0000988!3.16e-07!32;CL:0002032!3.16e-07!32;CL:0000037!3.16e-07!32;CL:0000566!3.16e-07!32;CL:0000837!3.16e-07!32;CL:0002031!4.78e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0000355,4.95e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.51e-17!3;DOID:4045!6.51e-17!3;DOID:0050686!1.01e-08!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.10e-37,3;DOID:4045,2.10e-37,3;DOID:0050686,3.74e-19,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.95e-13,9;UBERON:0002036,4.95e-13,9;UBERON:0002385,4.95e-13,9;UBERON:0000486,4.95e-13,9;UBERON:0007503,4.95e-13,9;UBERON:0001015,4.95e-13,9;UBERON:0002329,4.95e-13,9;UBERON:0003082,4.95e-13,9;UBERON:0003059,4.95e-13,9;UBERON:0007282,4.95e-13,9;UBERON:0004290,4.95e-13,9;UBERON:0009618,4.95e-13,9;UBERON:0000383,8.39e-12,10;UBERON:0007524,8.54e-11,11;UBERON:0003077,8.54e-11,11;UBERON:0007285,8.54e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.140788722151667,0.70219357896598,0,0,0.513602189793617,0.611942816932982,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,1.5626706890476,2.09409497589519,8.82347232046521,6.83045484958446,5.34061388334269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:110608435..110608438,- | |||
}} |
Revision as of 15:42, 12 September 2013
Short description: | p@chr10:110608435..110608438, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:110608435..110608438, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.55e-13 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.55e-13 | 1 |
multi-potent skeletal muscle stem cell | 4.95e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.95e-13 | 9 |
striated muscle tissue | 4.95e-13 | 9 |
muscle tissue | 4.95e-13 | 9 |
multilaminar epithelium | 4.95e-13 | 9 |
epithelial vesicle | 4.95e-13 | 9 |
musculature | 4.95e-13 | 9 |
somite | 4.95e-13 | 9 |
myotome | 4.95e-13 | 9 |
presomitic mesoderm | 4.95e-13 | 9 |
presumptive segmental plate | 4.95e-13 | 9 |
dermomyotome | 4.95e-13 | 9 |
trunk paraxial mesoderm | 4.95e-13 | 9 |
musculature of body | 8.39e-12 | 10 |
dense mesenchyme tissue | 8.54e-11 | 11 |
paraxial mesoderm | 8.54e-11 | 11 |
presumptive paraxial mesoderm | 8.54e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.10e-37 | 3 |
muscle cancer | 2.10e-37 | 3 |
organ system cancer | 3.74e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.