FFCP PHASE1:Hg19::chr2:197143317..197143335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57520|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29853|TSSclassifier=S|UniProt=|association_with_transcript=67bp_to_ENST00000462290_5end|coexpression_cluster_id=C4165|description=CAGE_peak_14_at_HECW2_5end|id=chr2:197143317..197143335,-|ontology_enrichment_celltype=CL:0000055!3.69e-17!180;CL:0000359!3.77e-15!32;CL:0000048!1.60e-13!430;CL:0002139!5.44e-13!24;CL:0000723!8.01e-13!436;CL:0000222!4.59e-12!119;CL:0000034!6.26e-12!444;CL:0002371!2.60e-11!591;CL:0000057!5.40e-11!75;CL:0000192!1.18e-09!42;CL:0000514!1.18e-09!42;CL:1000413!4.72e-09!9;CL:0000071!5.82e-09!18;CL:0002546!5.82e-09!18;CL:0000680!6.17e-09!57;CL:0000056!6.17e-09!57;CL:0000355!6.17e-09!57;CL:0000144!9.22e-09!625;CL:0000115!7.15e-08!35;CL:0000187!1.86e-07!54;CL:0002078!2.86e-07!44;CL:0002539!5.49e-07!10;CL:0000183!7.73e-07!59|ontology_enrichment_celltype_v019=CL:0000359;1.83e-15;32!CL:0002595;1.08e-12;5!CL:1000306;1.77e-11;4!CL:0002547;1.77e-11;4!CL:0000134;1.81e-10;55!CL:0000048;3.63e-09;58!CL:0000723;1.15e-08;61!CL:0002539;1.47e-08;10!CL:0000192;1.90e-08;43!CL:0000034;2.09e-07;69|ontology_enrichment_celltype_v019_2=CL:0000359,2.51e-16,32;CL:0000048,4.91e-14,427;CL:0000723,1.30e-13,433;CL:0000034,4.61e-13,441;CL:0002595,2.99e-12,5;CL:1000306,2.79e-11,4;CL:0002547,2.79e-11,4;CL:0000192,4.04e-11,43;CL:0000514,4.04e-11,43;CL:0000680,1.51e-09,58;CL:0000056,1.51e-09,58;CL:0000355,1.51e-09,58;CL:0000187,5.20e-09,55;CL:0002539,1.23e-08,10;CL:0000393,9.78e-08,61;CL:0000211,9.78e-08,61;CL:0000569,8.54e-07,4;CL:0000011,8.54e-07,4|ontology_enrichment_development_v019=CL:0000514;1.90e-08;43|ontology_enrichment_disease=DOID:2394!1.30e-13!14|ontology_enrichment_disease_v019=DOID:2394;1.56e-21;14!DOID:120;6.84e-10;27!DOID:193;4.91e-09;29|ontology_enrichment_disease_v019_2=DOID:2394,1.46e-21,14;DOID:120,6.61e-10,27;DOID:193,4.75e-09,29|ontology_enrichment_uberon=UBERON:0000055!5.10e-25!69;UBERON:0001637!7.95e-25!42;UBERON:0003509!7.95e-25!42;UBERON:0004572!7.95e-25!42;UBERON:0001981!7.72e-23!60;UBERON:0007500!7.72e-23!60;UBERON:0004537!7.72e-23!60;UBERON:0006965!7.72e-23!60;UBERON:0004872!2.34e-22!84;UBERON:0002049!1.07e-21!79;UBERON:0007798!1.07e-21!79;UBERON:0004573!1.99e-20!33;UBERON:0004571!1.99e-20!33;UBERON:0004535!9.43e-18!110;UBERON:0001009!1.30e-17!113;UBERON:0000947!5.44e-15!21;UBERON:0010191!5.44e-15!21;UBERON:0003914!3.84e-12!118;UBERON:0003081!2.44e-11!216;UBERON:0002204!1.38e-09!167;UBERON:0000914!3.87e-09!83;UBERON:0002329!3.87e-09!83;UBERON:0003077!3.87e-09!83;UBERON:0003059!3.87e-09!83;UBERON:0007282!3.87e-09!83;UBERON:0009618!3.87e-09!83;UBERON:0007285!3.87e-09!83;UBERON:0003915!4.72e-09!9;UBERON:0004700!4.72e-09!9;UBERON:0001917!4.72e-09!9;UBERON:0001986!5.82e-09!18;UBERON:0004638!5.82e-09!18;UBERON:0004852!5.82e-09!18;UBERON:0006914!1.60e-08!25;UBERON:0004290!4.05e-08!70;UBERON:0000486!5.78e-08!82;UBERON:0000487!6.84e-08!22;UBERON:0001134!8.41e-08!61;UBERON:0002036!8.41e-08!61;UBERON:0003082!8.41e-08!61;UBERON:0002385!2.69e-07!63;UBERON:0001015!2.69e-07!63;UBERON:0000383!2.69e-07!63;UBERON:0004237!5.49e-07!10;UBERON:0004695!5.49e-07!10;UBERON:0002111!5.49e-07!10;UBERON:0004178!5.49e-07!10;UBERON:0000992!5.55e-07!13|ontology_enrichment_uberon_v019=UBERON:0004573;2.66e-21;33!UBERON:0004571;2.66e-21;33!UBERON:0001637;9.12e-21;42!UBERON:0003509;9.12e-21;42!UBERON:0004572;9.12e-21;42!UBERON:0000947;4.73e-15;21!UBERON:0010191;4.73e-15;21!UBERON:0003834;1.08e-12;5!UBERON:0001533;1.08e-12;5!UBERON:0000992;3.26e-12;13!UBERON:0002119;6.94e-12;4!UBERON:0004797;1.77e-11;4!UBERON:0000415;1.77e-11;4!UBERON:0007240;1.77e-11;4!UBERON:0005742;1.77e-11;4!UBERON:0005734;1.77e-11;4!UBERON:0004664;1.77e-11;4!UBERON:0004663;1.77e-11;4!UBERON:0007500;4.53e-11;56!UBERON:0001981;4.53e-11;56!UBERON:0004537;4.53e-11;56!UBERON:0000055;3.16e-10;65!UBERON:0003513;5.89e-09;7!UBERON:0000991;1.06e-08;21!UBERON:0004237;1.47e-08;10!UBERON:0004695;1.47e-08;10!UBERON:0002111;1.47e-08;10!UBERON:0004178;1.47e-08;10!UBERON:0002118;1.51e-08;5!UBERON:0003914;6.26e-07;74|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.32e-26,42;UBERON:0003509,3.32e-26,42;UBERON:0004572,3.32e-26,42;UBERON:0004573,3.91e-23,33;UBERON:0004571,3.91e-23,33;UBERON:0004872,9.93e-20,83;UBERON:0007500,1.47e-18,59;UBERON:0001981,1.47e-18,59;UBERON:0004537,1.47e-18,59;UBERON:0006965,1.47e-18,59;UBERON:0000055,2.53e-18,68;UBERON:0003081,2.06e-16,203;UBERON:0000926,2.01e-15,315;UBERON:0004120,2.01e-15,315;UBERON:0006603,2.01e-15,315;UBERON:0000947,3.71e-15,21;UBERON:0010191,3.71e-15,21;UBERON:0002049,4.47e-15,78;UBERON:0007798,4.47e-15,78;UBERON:0004535,3.23e-14,109;UBERON:0001009,1.28e-13,112;UBERON:0000992,2.79e-12,13;UBERON:0003834,2.99e-12,5;UBERON:0001533,2.99e-12,5;UBERON:0002119,6.64e-12,4;UBERON:0000415,2.79e-11,4;UBERON:0007240,2.79e-11,4;UBERON:0005742,2.79e-11,4;UBERON:0005734,2.79e-11,4;UBERON:0004664,2.79e-11,4;UBERON:0004663,2.79e-11,4;UBERON:0003914,1.03e-10,117;UBERON:0002204,6.41e-10,167;UBERON:0000991,8.77e-09,21;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57520 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29853 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=67bp_to_ENST00000462290_5end | |||
|coexpression_cluster_id=C4165 | |||
|description=CAGE_peak_14_at_HECW2_5end | |||
|id=chr2:197143317..197143335,- | |||
|ontology_enrichment_celltype=CL:0000055!3.69e-17!180;CL:0000359!3.77e-15!32;CL:0000048!1.60e-13!430;CL:0002139!5.44e-13!24;CL:0000723!8.01e-13!436;CL:0000222!4.59e-12!119;CL:0000034!6.26e-12!444;CL:0002371!2.60e-11!591;CL:0000057!5.40e-11!75;CL:0000192!1.18e-09!42;CL:0000514!1.18e-09!42;CL:1000413!4.72e-09!9;CL:0000071!5.82e-09!18;CL:0002546!5.82e-09!18;CL:0000680!6.17e-09!57;CL:0000056!6.17e-09!57;CL:0000355!6.17e-09!57;CL:0000144!9.22e-09!625;CL:0000115!7.15e-08!35;CL:0000187!1.86e-07!54;CL:0002078!2.86e-07!44;CL:0002539!5.49e-07!10;CL:0000183!7.73e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.83e-15;32!CL:0002595;1.08e-12;5!CL:1000306;1.77e-11;4!CL:0002547;1.77e-11;4!CL:0000134;1.81e-10;55!CL:0000048;3.63e-09;58!CL:0000723;1.15e-08;61!CL:0002539;1.47e-08;10!CL:0000192;1.90e-08;43!CL:0000034;2.09e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.51e-16,32;CL:0000048,4.91e-14,427;CL:0000723,1.30e-13,433;CL:0000034,4.61e-13,441;CL:0002595,2.99e-12,5;CL:1000306,2.79e-11,4;CL:0002547,2.79e-11,4;CL:0000192,4.04e-11,43;CL:0000514,4.04e-11,43;CL:0000680,1.51e-09,58;CL:0000056,1.51e-09,58;CL:0000355,1.51e-09,58;CL:0000187,5.20e-09,55;CL:0002539,1.23e-08,10;CL:0000393,9.78e-08,61;CL:0000211,9.78e-08,61;CL:0000569,8.54e-07,4;CL:0000011,8.54e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.90e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!1.30e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.56e-21;14!DOID:120;6.84e-10;27!DOID:193;4.91e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.46e-21,14;DOID:120,6.61e-10,27;DOID:193,4.75e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.10e-25!69;UBERON:0001637!7.95e-25!42;UBERON:0003509!7.95e-25!42;UBERON:0004572!7.95e-25!42;UBERON:0001981!7.72e-23!60;UBERON:0007500!7.72e-23!60;UBERON:0004537!7.72e-23!60;UBERON:0006965!7.72e-23!60;UBERON:0004872!2.34e-22!84;UBERON:0002049!1.07e-21!79;UBERON:0007798!1.07e-21!79;UBERON:0004573!1.99e-20!33;UBERON:0004571!1.99e-20!33;UBERON:0004535!9.43e-18!110;UBERON:0001009!1.30e-17!113;UBERON:0000947!5.44e-15!21;UBERON:0010191!5.44e-15!21;UBERON:0003914!3.84e-12!118;UBERON:0003081!2.44e-11!216;UBERON:0002204!1.38e-09!167;UBERON:0000914!3.87e-09!83;UBERON:0002329!3.87e-09!83;UBERON:0003077!3.87e-09!83;UBERON:0003059!3.87e-09!83;UBERON:0007282!3.87e-09!83;UBERON:0009618!3.87e-09!83;UBERON:0007285!3.87e-09!83;UBERON:0003915!4.72e-09!9;UBERON:0004700!4.72e-09!9;UBERON:0001917!4.72e-09!9;UBERON:0001986!5.82e-09!18;UBERON:0004638!5.82e-09!18;UBERON:0004852!5.82e-09!18;UBERON:0006914!1.60e-08!25;UBERON:0004290!4.05e-08!70;UBERON:0000486!5.78e-08!82;UBERON:0000487!6.84e-08!22;UBERON:0001134!8.41e-08!61;UBERON:0002036!8.41e-08!61;UBERON:0003082!8.41e-08!61;UBERON:0002385!2.69e-07!63;UBERON:0001015!2.69e-07!63;UBERON:0000383!2.69e-07!63;UBERON:0004237!5.49e-07!10;UBERON:0004695!5.49e-07!10;UBERON:0002111!5.49e-07!10;UBERON:0004178!5.49e-07!10;UBERON:0000992!5.55e-07!13 | |||
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|short_description=p14@HECW2 | |||
}} |
Revision as of 15:50, 12 September 2013
Short description: | p14@HECW2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_HECW2_5end |
Coexpression cluster: | C4165_schwannoma_CD14_Smooth_Fibroblast_mesenchymal_Mesenchymal_Preadipocyte |
Association with transcript: | 67bp_to_ENST00000462290_5end |
EntrezGene: | HECW2 |
HGNC: | 29853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.51e-16 | 32 |
multi fate stem cell | 4.91e-14 | 427 |
somatic stem cell | 1.30e-13 | 433 |
stem cell | 4.61e-13 | 441 |
smooth muscle cell of the subclavian artery | 2.99e-12 | 5 |
fibroblast of tunica adventitia of artery | 2.79e-11 | 4 |
fibroblast of the aortic adventitia | 2.79e-11 | 4 |
smooth muscle cell | 4.04e-11 | 43 |
smooth muscle myoblast | 4.04e-11 | 43 |
muscle precursor cell | 1.51e-09 | 58 |
myoblast | 1.51e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.51e-09 | 58 |
muscle cell | 5.20e-09 | 55 |
aortic smooth muscle cell | 1.23e-08 | 10 |
electrically responsive cell | 9.78e-08 | 61 |
electrically active cell | 9.78e-08 | 61 |
cardiac mesenchymal cell | 8.54e-07 | 4 |
migratory trunk neural crest cell | 8.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.46e-21 | 14 |
female reproductive organ cancer | 6.61e-10 | 27 |
reproductive organ cancer | 4.75e-09 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.