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FFCP PHASE1:Mm9::chr10:118677188..118677209,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=71902|HGNC=|MCL_coexpression_id=0|UniProt=Q6ZQ38|association_with_transcript=-77bp_to_ENSMUST00000020315,NM_027994,uc007hec.2_5end|description=CAGE_peak_5_at_Cand1_5end|id=chr10:118677188..118677209,-|ontology_enrichment_celltype=CL:0000117!1.89e-14!23;CL:0000337!1.89e-14!23;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,8.84e-27,23;CL:0000337,8.84e-27,23;CL:0000540,1.98e-16,33;CL:0000047,1.98e-16,33;CL:0000031,1.98e-16,33;CL:0000404,1.98e-16,33;CL:0000393,8.05e-13,39;CL:0000211,8.05e-13,39;CL:0002319,5.37e-11,43;CL:0000221,1.35e-10,44;CL:0000133,1.35e-10,44;CL:0002609,4.56e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.95e-18!71;UBERON:0003075!4.95e-18!71;UBERON:0007284!4.95e-18!71;UBERON:0001049!6.50e-18!52;UBERON:0005068!6.50e-18!52;UBERON:0006241!6.50e-18!52;UBERON:0007135!6.50e-18!52;UBERON:0001017!2.86e-16!73;UBERON:0005743!2.86e-16!73;UBERON:0000153!3.97e-16!94;UBERON:0000955!4.33e-16!50;UBERON:0006238!4.33e-16!50;UBERON:0002616!5.63e-16!49;UBERON:0007811!1.33e-15!86;UBERON:0000073!1.52e-15!75;UBERON:0001016!1.52e-15!75;UBERON:0000033!2.36e-15!63;UBERON:0003056!2.89e-15!49;UBERON:0002020!1.26e-14!34;UBERON:0003080!3.55e-14!40;UBERON:0002780!9.69e-14!39;UBERON:0001890!9.69e-14!39;UBERON:0006240!9.69e-14!39;UBERON:0004121!6.57e-12!102;UBERON:0000924!6.57e-12!102;UBERON:0006601!6.57e-12!102;UBERON:0002791!1.08e-11!29;UBERON:0003528!1.08e-11!29;UBERON:0001893!1.08e-11!29;UBERON:0000956!3.24e-08!21;UBERON:0001869!3.24e-08!21;UBERON:0000203!3.24e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-21,54;UBERON:0001049,3.29e-19,52;UBERON:0005068,3.29e-19,52;UBERON:0006241,3.29e-19,52;UBERON:0007135,3.29e-19,52;UBERON:0002346,4.72e-19,64;UBERON:0003075,4.72e-19,64;UBERON:0007284,4.72e-19,64;UBERON:0002020,1.89e-18,34;UBERON:0001017,7.17e-18,73;UBERON:0001016,4.36e-17,75;UBERON:0010371,2.36e-15,73;UBERON:0003056,3.36e-15,49;UBERON:0004121,3.58e-15,95;UBERON:0000924,3.58e-15,95;UBERON:0006601,3.58e-15,95;UBERON:0003080,5.51e-14,40;UBERON:0002616,1.47e-13,46;UBERON:0002780,3.05e-13,39;UBERON:0001890,3.05e-13,39;UBERON:0006240,3.05e-13,39;UBERON:0003528,3.53e-13,29;UBERON:0002791,3.53e-13,29;UBERON:0001893,3.53e-13,29;UBERON:0000955,4.19e-13,47;UBERON:0006238,4.19e-13,47;UBERON:0010314,8.08e-11,92;UBERON:0000956,2.87e-08,21;UBERON:0001869,2.87e-08,21;UBERON:0000203,2.87e-08,21;UBERON:0002240,3.25e-08,6;UBERON:0005174,3.25e-08,6;UBERON:0001137,3.25e-08,6;UBERON:0001948,2.38e-07,5;UBERON:0002315,2.38e-07,5|phase1_expression=0.640595388419176,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0.387369970324729,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,7.73893940374735,0,0,0,0,0.57423196411502,0,0,0,0.504060259519861,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0,7.08107613008592,7.93486468908049,4.43681982454325,0.338844532069132,0,0,0,0,0,0,2.59224030771194,3.37514845829227,2.94454945891935,1.71390590642282,2.65042249141936,6.1245399607477,5.07980996396653,10.1114066527102,1.10115880999389,2.80912143787413,2.4577045320999,7.38563211289086,5.21479568533735,7.29278718779464,0.558365998002762,2.8138130501584,2.13917546887534,3.83017161115768,3.41692033917847,4.28718725398191,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.983110940922263,0.340860645156116,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0,1.1418387971906,0,0.29688427812965,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0.127070227073065,1.3481157546434,0.457500602818626,6.40837195775608,0.695297280769106,2.30143911597297,2.90903262383384,1.78465389374533,0.611036183101898,0.124406970610093,0,0,1.17108398666433,0.229902104433473,0.900310649026746,1.05493372485001,1.02054748726992,1.0249097622788,1.21812241927647,0.776110112217047,1.29340795759705,1.70195472151037,0.879755620819744,0.219195732427575,1.66828349535359,0.348252166522167,0.205782136407943,0.796137067273973,0,0.51469581422943,0.568326998791185,1.44988040774851,0.938104239924385,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0,0.134206418760372,1.47202963994889,3.49875682089567,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,0.25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|EntrezGene=71902
|HGNC=
|MCL_coexpression_id=0
|UniProt=Q6ZQ38
|association_with_transcript=-77bp_to_ENSMUST00000020315,NM_027994,uc007hec.2_5end
|description=CAGE_peak_5_at_Cand1_5end
|id=chr10:118677188..118677209,-
|ontology_enrichment_celltype=CL:0000117!1.89e-14!23;CL:0000337!1.89e-14!23;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.84e-27,23;CL:0000337,8.84e-27,23;CL:0000540,1.98e-16,33;CL:0000047,1.98e-16,33;CL:0000031,1.98e-16,33;CL:0000404,1.98e-16,33;CL:0000393,8.05e-13,39;CL:0000211,8.05e-13,39;CL:0002319,5.37e-11,43;CL:0000221,1.35e-10,44;CL:0000133,1.35e-10,44;CL:0002609,4.56e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.95e-18!71;UBERON:0003075!4.95e-18!71;UBERON:0007284!4.95e-18!71;UBERON:0001049!6.50e-18!52;UBERON:0005068!6.50e-18!52;UBERON:0006241!6.50e-18!52;UBERON:0007135!6.50e-18!52;UBERON:0001017!2.86e-16!73;UBERON:0005743!2.86e-16!73;UBERON:0000153!3.97e-16!94;UBERON:0000955!4.33e-16!50;UBERON:0006238!4.33e-16!50;UBERON:0002616!5.63e-16!49;UBERON:0007811!1.33e-15!86;UBERON:0000073!1.52e-15!75;UBERON:0001016!1.52e-15!75;UBERON:0000033!2.36e-15!63;UBERON:0003056!2.89e-15!49;UBERON:0002020!1.26e-14!34;UBERON:0003080!3.55e-14!40;UBERON:0002780!9.69e-14!39;UBERON:0001890!9.69e-14!39;UBERON:0006240!9.69e-14!39;UBERON:0004121!6.57e-12!102;UBERON:0000924!6.57e-12!102;UBERON:0006601!6.57e-12!102;UBERON:0002791!1.08e-11!29;UBERON:0003528!1.08e-11!29;UBERON:0001893!1.08e-11!29;UBERON:0000956!3.24e-08!21;UBERON:0001869!3.24e-08!21;UBERON:0000203!3.24e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-21,54;UBERON:0001049,3.29e-19,52;UBERON:0005068,3.29e-19,52;UBERON:0006241,3.29e-19,52;UBERON:0007135,3.29e-19,52;UBERON:0002346,4.72e-19,64;UBERON:0003075,4.72e-19,64;UBERON:0007284,4.72e-19,64;UBERON:0002020,1.89e-18,34;UBERON:0001017,7.17e-18,73;UBERON:0001016,4.36e-17,75;UBERON:0010371,2.36e-15,73;UBERON:0003056,3.36e-15,49;UBERON:0004121,3.58e-15,95;UBERON:0000924,3.58e-15,95;UBERON:0006601,3.58e-15,95;UBERON:0003080,5.51e-14,40;UBERON:0002616,1.47e-13,46;UBERON:0002780,3.05e-13,39;UBERON:0001890,3.05e-13,39;UBERON:0006240,3.05e-13,39;UBERON:0003528,3.53e-13,29;UBERON:0002791,3.53e-13,29;UBERON:0001893,3.53e-13,29;UBERON:0000955,4.19e-13,47;UBERON:0006238,4.19e-13,47;UBERON:0010314,8.08e-11,92;UBERON:0000956,2.87e-08,21;UBERON:0001869,2.87e-08,21;UBERON:0000203,2.87e-08,21;UBERON:0002240,3.25e-08,6;UBERON:0005174,3.25e-08,6;UBERON:0001137,3.25e-08,6;UBERON:0001948,2.38e-07,5;UBERON:0002315,2.38e-07,5
|phase1_expression=0.640595388419176,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0.387369970324729,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,7.73893940374735,0,0,0,0,0.57423196411502,0,0,0,0.504060259519861,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0,7.08107613008592,7.93486468908049,4.43681982454325,0.338844532069132,0,0,0,0,0,0,2.59224030771194,3.37514845829227,2.94454945891935,1.71390590642282,2.65042249141936,6.1245399607477,5.07980996396653,10.1114066527102,1.10115880999389,2.80912143787413,2.4577045320999,7.38563211289086,5.21479568533735,7.29278718779464,0.558365998002762,2.8138130501584,2.13917546887534,3.83017161115768,3.41692033917847,4.28718725398191,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.983110940922263,0.340860645156116,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0,1.1418387971906,0,0.29688427812965,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0.127070227073065,1.3481157546434,0.457500602818626,6.40837195775608,0.695297280769106,2.30143911597297,2.90903262383384,1.78465389374533,0.611036183101898,0.124406970610093,0,0,1.17108398666433,0.229902104433473,0.900310649026746,1.05493372485001,1.02054748726992,1.0249097622788,1.21812241927647,0.776110112217047,1.29340795759705,1.70195472151037,0.879755620819744,0.219195732427575,1.66828349535359,0.348252166522167,0.205782136407943,0.796137067273973,0,0.51469581422943,0.568326998791185,1.44988040774851,0.938104239924385,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0,0.134206418760372,1.47202963994889,3.49875682089567,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0,1.13800740571849,0.913988100877831,0,0.203651327845314,0.387904974335251,1.05203729835478,0.379419222745544,0.147610147979602,0.31399745568275,0.370191491765402,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,1.28440471990234,2.22702204525186,0.327869890753351,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.642642632843614,0.283880170416537,0.35613120733451,0.651547837414304,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,0,0,0,0,0,0,1.36175842301515,0.900305470156551,0.646793418913773,0.428674070063185,0.709360934569094,0.178368817602071,0.658196082408484,2.43571959291679,0.23467170806371,1.0591603543191,0,0.16488625294148,0.322928853391811,0,0.119372344003136,0,0,1.48340241608408,0,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.276399947608848,0,1.89801596148681,0,0.324016022465404,0,0.218362563746178,0,0,0,0,0,55.8056009297348,0.747582730219894,0.496375471371293,0.972255941720238,0.904118764344118,0.337912250981556,0.821500670520278,0.5208175393758,0.838874755405687,14.7366313703864,29.955120650818,0.632022241256357,0.810900861160657,0.718976700153791,0.649604114888975,1.07416017400489,0.596044064343795,0.360586348559907,0.590758108698309,1.11063094942962,1.600342939755,0.504130925684203,0.487289403698762,0.962118416403295,0.818138315270983,0,0.221985953374065,0.179427713218951,0.839423081820392,0.386379188064381,0.375364950902364,0.36630324853453,0.643105137237198,0,2.82375921308533,0.920650473014354,0.572895513439397,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,2.26571204492102,1.03552062350364,2.80225838477277,2.39414924040619,1.70733605754134,0.972426868273176,0.419226325255965,1.10306105070008,1.11123363900808,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.749132059759059,0.704276676453562,0.746661096422973,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0,0.354951612318675,0.715308569841963,1.45346416632329,1.03520318456864,1.01537529470012,0.73171189149109,0,0.679020569229309,1.12228454331548,0.474540072496697,0.689531376628944,0.818462086339379,0.154936841185966,0.964533054905707,1.49886346762768,1.40358965067245,0.429742108096597,0.57386499620653,0.220591419119515,0
|short_description=p5@Cand1
}}

Revision as of 15:52, 12 September 2013

Short description:p5@Cand1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Cand1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -77bp_to_ENSMUST00000020315, NM_027994, uc007hec.2_5end
EntrezGene:Cand1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Cand1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G555.81
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H314.74
testis, neonate N30.CNhs11130.1391-42E229.96
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.57e-2154
neural tube3.29e-1952
neural rod3.29e-1952
future spinal cord3.29e-1952
neural keel3.29e-1952
neurectoderm4.72e-1964
neural plate4.72e-1964
presumptive neural plate4.72e-1964
gray matter1.89e-1834
central nervous system7.17e-1873
nervous system4.36e-1775
ecto-epithelium2.36e-1573
pre-chordal neural plate3.36e-1549
ectoderm-derived structure3.58e-1595
ectoderm3.58e-1595
presumptive ectoderm3.58e-1595
anterior neural tube5.51e-1440
regional part of brain1.47e-1346
regional part of forebrain3.05e-1339
forebrain3.05e-1339
future forebrain3.05e-1339
brain grey matter3.53e-1329
regional part of telencephalon3.53e-1329
telencephalon3.53e-1329
brain4.19e-1347
future brain4.19e-1347
structure with developmental contribution from neural crest8.08e-1192
cerebral cortex2.87e-0821
cerebral hemisphere2.87e-0821
pallium2.87e-0821
spinal cord3.25e-086
dorsal region element3.25e-086
dorsum3.25e-086
regional part of spinal cord2.38e-075
gray matter of spinal cord2.38e-075







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