FFCP PHASE1:Mm9::chr10:126603744..126603756,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126603744..126603756,+|id=chr10:126603744..126603756,+|ontology_enrichment_celltype=CL:0000239!8.43e-15!6;CL:0000677!8.43e-15!6;CL:0000212!8.43e-15!6;CL:0000584!8.43e-15!6;CL:0000075!1.45e-12!7;CL:0002563!1.46e-12!9;CL:0002251!1.46e-12!9;CL:0000624!4.16e-09!8;CL:0000473!4.80e-08!3;CL:0000627!4.80e-08!3;CL:0000682!4.80e-08!3;CL:0000791!5.07e-08!9;CL:0000789!5.07e-08!9;CL:0002420!5.07e-08!9;CL:0002419!5.07e-08!9;CL:0000790!5.07e-08!9;CL:0000066!7.01e-08!25;CL:0002076!4.54e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-29,6;CL:0000677,1.39e-29,6;CL:0000584,1.39e-29,6;CL:0000075,2.57e-25,7;CL:0002563,1.28e-19,9;CL:0002251,1.28e-19,9;CL:0000682,2.86e-15,3;CL:0000066,6.47e-15,25;CL:0002076,1.29e-11,15;CL:0000223,1.33e-08,20;CL:0000473,7.77e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.80e-18!15;UBERON:0001242!7.96e-14!13;UBERON:0000060!7.96e-14!13;UBERON:0001262!7.96e-14!13;UBERON:0004786!7.96e-14!13;UBERON:0000160!8.59e-14!43;UBERON:0003350!1.46e-12!9;UBERON:0004808!1.46e-12!9;UBERON:0001277!1.46e-12!9;UBERON:0004923!3.38e-10!24;UBERON:0000485!4.61e-10!11;UBERON:0005409!7.22e-09!59;UBERON:0001007!1.19e-07!128;UBERON:0001555!1.19e-07!128;UBERON:0007026!1.19e-07!128;UBERON:0004119!1.95e-07!130;UBERON:0000925!1.95e-07!130;UBERON:0006595!1.95e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.11e-26,15;UBERON:0000160,1.72e-21,31;UBERON:0003350,1.28e-19,9;UBERON:0004808,1.28e-19,9;UBERON:0001277,1.28e-19,9;UBERON:0001242,2.20e-18,13;UBERON:0001262,2.20e-18,13;UBERON:0004786,2.20e-18,13;UBERON:0000485,5.50e-16,11;UBERON:0004923,7.75e-16,24;UBERON:0005409,1.40e-13,47;UBERON:0001962,6.17e-11,2;UBERON:0001961,6.17e-11,2;UBERON:0001744,6.17e-11,2;UBERON:0002465,1.42e-07,3|phase1_expression=0,4.53668029931169,7.27998783023258,10.8887116070459,9.01612313903425,1.34303417529512,2.10251376535973,0.258246646883153,0,0,0.34243593645101,0.239316476986009,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0,0,0,3.99981056983517,5.73523202667925,2.29692785646008,6.8921919385452,2.80112602491656,0.570070258369122,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8688452342709,3.96675849995316,0,0,0,0,0,0.190225626112559,0.949058123089023,0,0,0,0.19496408711912,0,3.8904848977445,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:126603744..126603756,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126603744..126603756,+ | |||
|id=chr10:126603744..126603756,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.43e-15!6;CL:0000677!8.43e-15!6;CL:0000212!8.43e-15!6;CL:0000584!8.43e-15!6;CL:0000075!1.45e-12!7;CL:0002563!1.46e-12!9;CL:0002251!1.46e-12!9;CL:0000624!4.16e-09!8;CL:0000473!4.80e-08!3;CL:0000627!4.80e-08!3;CL:0000682!4.80e-08!3;CL:0000791!5.07e-08!9;CL:0000789!5.07e-08!9;CL:0002420!5.07e-08!9;CL:0002419!5.07e-08!9;CL:0000790!5.07e-08!9;CL:0000066!7.01e-08!25;CL:0002076!4.54e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-29,6;CL:0000677,1.39e-29,6;CL:0000584,1.39e-29,6;CL:0000075,2.57e-25,7;CL:0002563,1.28e-19,9;CL:0002251,1.28e-19,9;CL:0000682,2.86e-15,3;CL:0000066,6.47e-15,25;CL:0002076,1.29e-11,15;CL:0000223,1.33e-08,20;CL:0000473,7.77e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.80e-18!15;UBERON:0001242!7.96e-14!13;UBERON:0000060!7.96e-14!13;UBERON:0001262!7.96e-14!13;UBERON:0004786!7.96e-14!13;UBERON:0000160!8.59e-14!43;UBERON:0003350!1.46e-12!9;UBERON:0004808!1.46e-12!9;UBERON:0001277!1.46e-12!9;UBERON:0004923!3.38e-10!24;UBERON:0000485!4.61e-10!11;UBERON:0005409!7.22e-09!59;UBERON:0001007!1.19e-07!128;UBERON:0001555!1.19e-07!128;UBERON:0007026!1.19e-07!128;UBERON:0004119!1.95e-07!130;UBERON:0000925!1.95e-07!130;UBERON:0006595!1.95e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.11e-26,15;UBERON:0000160,1.72e-21,31;UBERON:0003350,1.28e-19,9;UBERON:0004808,1.28e-19,9;UBERON:0001277,1.28e-19,9;UBERON:0001242,2.20e-18,13;UBERON:0001262,2.20e-18,13;UBERON:0004786,2.20e-18,13;UBERON:0000485,5.50e-16,11;UBERON:0004923,7.75e-16,24;UBERON:0005409,1.40e-13,47;UBERON:0001962,6.17e-11,2;UBERON:0001961,6.17e-11,2;UBERON:0001744,6.17e-11,2;UBERON:0002465,1.42e-07,3 | |||
|phase1_expression=0,4.53668029931169,7.27998783023258,10.8887116070459,9.01612313903425,1.34303417529512,2.10251376535973,0.258246646883153,0,0,0.34243593645101,0.239316476986009,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0,0,0,3.99981056983517,5.73523202667925,2.29692785646008,6.8921919385452,2.80112602491656,0.570070258369122,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8688452342709,3.96675849995316,0,0,0,0,0,0.190225626112559,0.949058123089023,0,0,0,0.19496408711912,0,3.8904848977445,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:126603744..126603756,+ | |||
}} |
Revision as of 16:00, 12 September 2013
Short description: | p@chr10:126603744..126603756, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126603744..126603756, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.39e-29 | 6 |
gut absorptive cell | 1.39e-29 | 6 |
enterocyte | 1.39e-29 | 6 |
columnar/cuboidal epithelial cell | 2.57e-25 | 7 |
intestinal epithelial cell | 1.28e-19 | 9 |
epithelial cell of alimentary canal | 1.28e-19 | 9 |
M cell of gut | 2.86e-15 | 3 |
epithelial cell | 6.47e-15 | 25 |
endo-epithelial cell | 1.29e-11 | 15 |
endodermal cell | 1.33e-08 | 20 |
defensive cell | 7.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.11e-26 | 15 |
intestine | 1.72e-21 | 31 |
epithelium of mucosa | 1.28e-19 | 9 |
gastrointestinal system epithelium | 1.28e-19 | 9 |
intestinal epithelium | 1.28e-19 | 9 |
intestinal mucosa | 2.20e-18 | 13 |
wall of intestine | 2.20e-18 | 13 |
gastrointestinal system mucosa | 2.20e-18 | 13 |
simple columnar epithelium | 5.50e-16 | 11 |
organ component layer | 7.75e-16 | 24 |
gastrointestinal system | 1.40e-13 | 47 |
gut-associated lymphoid tissue | 6.17e-11 | 2 |
mucosa-associated lymphoid tissue | 6.17e-11 | 2 |
lymphoid tissue | 6.17e-11 | 2 |
lymphoid system | 1.42e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.