FFCP PHASE1:Mm9::chr10:126817647..126817758,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71750|HGNC=|UniProt=Q80TM6|association_with_transcript=0bp_to_ENSMUST00000166820_5end|description=CAGE_peak_1_at_R3hdm2_5end|id=chr10:126817647..126817758,+|ontology_enrichment_celltype=CL:0000117!1.79e-09!23;CL:0000337!1.79e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.79e-09,23;CL:0000337,1.79e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.14e-15!50;UBERON:0006238!5.14e-15!50;UBERON:0001049!8.67e-15!52;UBERON:0005068!8.67e-15!52;UBERON:0006241!8.67e-15!52;UBERON:0007135!8.67e-15!52;UBERON:0002616!2.29e-14!49;UBERON:0002020!3.19e-14!34;UBERON:0001017!4.28e-14!73;UBERON:0005743!4.28e-14!73;UBERON:0000033!4.50e-14!63;UBERON:0000073!1.82e-13!75;UBERON:0001016!1.82e-13!75;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0004121!1.66e-12!102;UBERON:0000924!1.66e-12!102;UBERON:0006601!1.66e-12!102;UBERON:0004111!5.20e-12!122;UBERON:0000025!1.01e-11!114;UBERON:0003080!4.69e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0002346!2.59e-10!71;UBERON:0003075!2.59e-10!71;UBERON:0007284!2.59e-10!71;UBERON:0003056!5.98e-10!49;UBERON:0000956!1.43e-09!21;UBERON:0001869!1.43e-09!21;UBERON:0000203!1.43e-09!21;UBERON:0007811!2.29e-09!86;UBERON:0002619!3.40e-08!17;UBERON:0000153!1.63e-07!94;UBERON:0002021!2.56e-07!10;UBERON:0000411!2.56e-07!10;UBERON:0001950!2.56e-07!10;UBERON:0000477!3.11e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.36e-16,54;UBERON:0001049,8.67e-15,52;UBERON:0005068,8.67e-15,52;UBERON:0006241,8.67e-15,52;UBERON:0007135,8.67e-15,52;UBERON:0002020,3.19e-14,34;UBERON:0001017,4.28e-14,73;UBERON:0004121,6.14e-14,95;UBERON:0000924,6.14e-14,95;UBERON:0006601,6.14e-14,95;UBERON:0001016,1.82e-13,75;UBERON:0000955,3.42e-13,47;UBERON:0006238,3.42e-13,47;UBERON:0003528,1.23e-12,29;UBERON:0002791,1.23e-12,29;UBERON:0001893,1.23e-12,29;UBERON:0002616,1.44e-12,46;UBERON:0002346,5.12e-12,64;UBERON:0003075,5.12e-12,64;UBERON:0007284,5.12e-12,64;UBERON:0004111,5.20e-12,122;UBERON:0010314,5.78e-12,92;UBERON:0010371,8.74e-12,73;UBERON:0000025,1.01e-11,114;UBERON:0003080,4.69e-11,40;UBERON:0002780,1.23e-10,39;UBERON:0001890,1.23e-10,39;UBERON:0006240,1.23e-10,39;UBERON:0003056,5.98e-10,49;UBERON:0000956,1.43e-09,21;UBERON:0001869,1.43e-09,21;UBERON:0000203,1.43e-09,21;UBERON:0002619,3.40e-08,17;UBERON:0002021,2.56e-07,10;UBERON:0000411,2.56e-07,10;UBERON:0001950,2.56e-07,10|phase1_expression=19.5381593467849,18.1467211972468,25.0249581664245,29.9439569193762,27.5492651470491,17.4594442788365,15.4184342793047,10.3298658753261,10.559154161375,10.5329036844897,12.4989116804619,11.7265073723145,11.4704489053908,12.7633787531736,21.6521345180181,16.8054471933556,13.2916756844348,20.5050407482854,20.8413939080723,14.004858509335,34.4425325111833,9.82980416888764,7.31359409589019,14.3993180514066,11.0116454912242,17.8011908875656,12.4920978886132,14.2211013572687,13.4916627814025,18.6502296022349,9.5344119581781,10.1604907753541,15.9916844771988,31.6963362030877,14.1537293678125,11.137721239019,14.2918549383658,28.4601508901097,23.440060335714,24.0820922227947,32.3527318417058,28.0048648832963,34.9567454182431,20.5211813300191,24.8373481487811,26.0636388069588,29.7308710852255,18.3141131359575,25.4835971971987,18.4708404120569,19.0381533410493,31.6255641602937,16.1071301815427,21.7608642603403,17.8129713545506,10.5476368774738,21.4900079954068,13.4074743992135,33.3822160418336,26.4495489636016,32.3254015788151,16.2645375393183,17.7858959222228,27.8968912357234,16.8107281636386,25.5772841380596,18.5752068521411,26.8952813725088,32.2474694279366,33.8864905212544,30.9177693186532,29.9933533623994,26.5042249141936,30.3777182053086,41.4052434798781,35.8495326777908,51.7544640697127,59.2469248715271,56.3735977050414,35.6092976871523,45.2863835831928,37.5057626800867,32.943593882163,28.138130501584,43.2419041208373,38.8909732825241,37.301380369365,35.6022941526324,16.7354887266337,21.3867515102203,22.6094301187309,18.0689014166091,14.9593693415705,21.0484244738749,22.7421746106684,31.3618820968135,24.4373291029248,27.0984212899112,25.4590284510811,21.5537140451308,23.380007682929,41.0644727725817,124.854567456256,149.3240076622,9.74209684550464,9.12095515710355,12.6381111253696,23.9786147410026,25.63485048107,29.0946592567057,11.7970022200972,8.52503339273995,20.9860102503013,14.770818774157,28.5740558339763,25.0076516746054,27.1914464507811,33.5470508054195,18.5768215909474,32.6769036893767,34.6721183982818,31.0320162006542,16.775258509631,59.7272825903556,37.4909605196085,16.860165643767,16.2948569328052,11.9980546198682,11.5633906636489,36.3991253753719,32.0250421973039,36.8167251690693,46.5849178115301,49.0973678074235,36.9862719316017,37.9644555578553,20.9789089531652,26.8719056517801,22.492325500597,59.9759289276451,11.1903580947925,7.35686734187113,17.1059023315082,17.9338733224501,29.459804132525,25.2384028961154,33.0767087695843,39.0642089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| ||
|EntrezGene=71750 | |||
|HGNC= | |||
|UniProt=Q80TM6 | |||
|association_with_transcript=0bp_to_ENSMUST00000166820_5end | |||
|description=CAGE_peak_1_at_R3hdm2_5end | |||
|id=chr10:126817647..126817758,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.79e-09!23;CL:0000337!1.79e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.79e-09,23;CL:0000337,1.79e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.14e-15!50;UBERON:0006238!5.14e-15!50;UBERON:0001049!8.67e-15!52;UBERON:0005068!8.67e-15!52;UBERON:0006241!8.67e-15!52;UBERON:0007135!8.67e-15!52;UBERON:0002616!2.29e-14!49;UBERON:0002020!3.19e-14!34;UBERON:0001017!4.28e-14!73;UBERON:0005743!4.28e-14!73;UBERON:0000033!4.50e-14!63;UBERON:0000073!1.82e-13!75;UBERON:0001016!1.82e-13!75;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0004121!1.66e-12!102;UBERON:0000924!1.66e-12!102;UBERON:0006601!1.66e-12!102;UBERON:0004111!5.20e-12!122;UBERON:0000025!1.01e-11!114;UBERON:0003080!4.69e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0002346!2.59e-10!71;UBERON:0003075!2.59e-10!71;UBERON:0007284!2.59e-10!71;UBERON:0003056!5.98e-10!49;UBERON:0000956!1.43e-09!21;UBERON:0001869!1.43e-09!21;UBERON:0000203!1.43e-09!21;UBERON:0007811!2.29e-09!86;UBERON:0002619!3.40e-08!17;UBERON:0000153!1.63e-07!94;UBERON:0002021!2.56e-07!10;UBERON:0000411!2.56e-07!10;UBERON:0001950!2.56e-07!10;UBERON:0000477!3.11e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.36e-16,54;UBERON:0001049,8.67e-15,52;UBERON:0005068,8.67e-15,52;UBERON:0006241,8.67e-15,52;UBERON:0007135,8.67e-15,52;UBERON:0002020,3.19e-14,34;UBERON:0001017,4.28e-14,73;UBERON:0004121,6.14e-14,95;UBERON:0000924,6.14e-14,95;UBERON:0006601,6.14e-14,95;UBERON:0001016,1.82e-13,75;UBERON:0000955,3.42e-13,47;UBERON:0006238,3.42e-13,47;UBERON:0003528,1.23e-12,29;UBERON:0002791,1.23e-12,29;UBERON:0001893,1.23e-12,29;UBERON:0002616,1.44e-12,46;UBERON:0002346,5.12e-12,64;UBERON:0003075,5.12e-12,64;UBERON:0007284,5.12e-12,64;UBERON:0004111,5.20e-12,122;UBERON:0010314,5.78e-12,92;UBERON:0010371,8.74e-12,73;UBERON:0000025,1.01e-11,114;UBERON:0003080,4.69e-11,40;UBERON:0002780,1.23e-10,39;UBERON:0001890,1.23e-10,39;UBERON:0006240,1.23e-10,39;UBERON:0003056,5.98e-10,49;UBERON:0000956,1.43e-09,21;UBERON:0001869,1.43e-09,21;UBERON:0000203,1.43e-09,21;UBERON:0002619,3.40e-08,17;UBERON:0002021,2.56e-07,10;UBERON:0000411,2.56e-07,10;UBERON:0001950,2.56e-07,10 | |||
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| |||
|short_description=p1@R3hdm2 | |||
}} |
Revision as of 16:02, 12 September 2013
Short description: | p1@R3hdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_R3hdm2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000166820_5end |
EntrezGene: | R3hdm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.79e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.79e-09 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.