FFCP PHASE1:Mm9::chr10:18890493..18890502,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=280|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:18890493..18890502,-|id=chr10:18890493..18890502,-|ontology_enrichment_celltype=CL:0000791!1.01e-23!9;CL:0000789!1.01e-23!9;CL:0002420!1.01e-23!9;CL:0002419!1.01e-23!9;CL:0000790!1.01e-23!9;CL:0000084!2.30e-19!11;CL:0000827!2.30e-19!11;CL:0000624!1.45e-18!8;CL:0000838!9.97e-18!12;CL:0000988!2.63e-17!32;CL:0002032!2.63e-17!32;CL:0000037!2.63e-17!32;CL:0000566!2.63e-17!32;CL:0000837!2.63e-17!32;CL:0000542!2.42e-16!13;CL:0000051!2.42e-16!13;CL:0002320!2.86e-14!46;CL:0000134!2.86e-14!46;CL:0000738!2.01e-12!17;CL:0002087!2.01e-12!17;CL:0000034!3.93e-12!97;CL:0000219!5.88e-12!54;CL:0000063!1.57e-09!66;CL:0000144!2.21e-09!121;CL:0000012!2.21e-09!121;CL:0000893!2.68e-09!6;CL:0002489!2.68e-09!6;CL:0000898!2.68e-09!6;CL:0000809!2.68e-09!6;CL:0000810!2.68e-09!6;CL:0000895!2.68e-09!6;CL:0000808!2.68e-09!6;CL:0000894!2.68e-09!6;CL:0000806!2.68e-09!6;CL:0000807!2.68e-09!6;CL:0000805!2.68e-09!6;CL:0002425!2.68e-09!6;CL:0002436!2.68e-09!6;CL:0002427!2.68e-09!6;CL:0002428!2.68e-09!6;CL:0002429!2.68e-09!6;CL:0002433!2.68e-09!6;CL:0002431!2.68e-09!6;CL:0002432!2.68e-09!6;CL:0002031!2.50e-08!25;CL:0000723!7.36e-08!91;CL:0000048!7.36e-08!91;CL:0000625!1.20e-07!1;CL:0000815!1.83e-07!1;CL:0000792!1.83e-07!1;CL:0000115!2.43e-07!1;CL:0000213!2.43e-07!1;CL:0002078!2.43e-07!1;CL:0002262!2.43e-07!1;CL:1000398!2.43e-07!1|ontology_enrichment_celltype_v019_2=CL:0000625,5.15e-19,1;CL:0000815,1.74e-18,1;CL:0000792,1.74e-18,1;CL:0000791,3.01e-18,9;CL:0000789,3.01e-18,9;CL:0002420,3.01e-18,9;CL:0002419,3.01e-18,9;CL:0000790,3.01e-18,9;CL:0000084,4.28e-15,11;CL:0000827,4.28e-15,11;CL:0000838,6.55e-14,12;CL:0000542,6.61e-13,13;CL:0000051,6.61e-13,13;CL:0000738,4.62e-10,17;CL:0002087,4.62e-10,17;CL:0000624,1.08e-09,8;CL:0002031,4.44e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.86e-14!46;UBERON:0000353!2.43e-07!1;UBERON:0003497!2.43e-07!1;UBERON:0003909!2.43e-07!1;UBERON:0003835!2.43e-07!1;UBERON:0003513!2.43e-07!1;UBERON:0001281!2.43e-07!1;UBERON:0001280!2.43e-07!1;UBERON:0004647!2.43e-07!1|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0.140788722151667,0,0,0,0.856003649656029,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,3.35883485576779,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:18890493..18890502,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=280 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:18890493..18890502,- | |||
|id=chr10:18890493..18890502,- | |||
|ontology_enrichment_celltype=CL:0000791!1.01e-23!9;CL:0000789!1.01e-23!9;CL:0002420!1.01e-23!9;CL:0002419!1.01e-23!9;CL:0000790!1.01e-23!9;CL:0000084!2.30e-19!11;CL:0000827!2.30e-19!11;CL:0000624!1.45e-18!8;CL:0000838!9.97e-18!12;CL:0000988!2.63e-17!32;CL:0002032!2.63e-17!32;CL:0000037!2.63e-17!32;CL:0000566!2.63e-17!32;CL:0000837!2.63e-17!32;CL:0000542!2.42e-16!13;CL:0000051!2.42e-16!13;CL:0002320!2.86e-14!46;CL:0000134!2.86e-14!46;CL:0000738!2.01e-12!17;CL:0002087!2.01e-12!17;CL:0000034!3.93e-12!97;CL:0000219!5.88e-12!54;CL:0000063!1.57e-09!66;CL:0000144!2.21e-09!121;CL:0000012!2.21e-09!121;CL:0000893!2.68e-09!6;CL:0002489!2.68e-09!6;CL:0000898!2.68e-09!6;CL:0000809!2.68e-09!6;CL:0000810!2.68e-09!6;CL:0000895!2.68e-09!6;CL:0000808!2.68e-09!6;CL:0000894!2.68e-09!6;CL:0000806!2.68e-09!6;CL:0000807!2.68e-09!6;CL:0000805!2.68e-09!6;CL:0002425!2.68e-09!6;CL:0002436!2.68e-09!6;CL:0002427!2.68e-09!6;CL:0002428!2.68e-09!6;CL:0002429!2.68e-09!6;CL:0002433!2.68e-09!6;CL:0002431!2.68e-09!6;CL:0002432!2.68e-09!6;CL:0002031!2.50e-08!25;CL:0000723!7.36e-08!91;CL:0000048!7.36e-08!91;CL:0000625!1.20e-07!1;CL:0000815!1.83e-07!1;CL:0000792!1.83e-07!1;CL:0000115!2.43e-07!1;CL:0000213!2.43e-07!1;CL:0002078!2.43e-07!1;CL:0002262!2.43e-07!1;CL:1000398!2.43e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.15e-19,1;CL:0000815,1.74e-18,1;CL:0000792,1.74e-18,1;CL:0000791,3.01e-18,9;CL:0000789,3.01e-18,9;CL:0002420,3.01e-18,9;CL:0002419,3.01e-18,9;CL:0000790,3.01e-18,9;CL:0000084,4.28e-15,11;CL:0000827,4.28e-15,11;CL:0000838,6.55e-14,12;CL:0000542,6.61e-13,13;CL:0000051,6.61e-13,13;CL:0000738,4.62e-10,17;CL:0002087,4.62e-10,17;CL:0000624,1.08e-09,8;CL:0002031,4.44e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.86e-14!46;UBERON:0000353!2.43e-07!1;UBERON:0003497!2.43e-07!1;UBERON:0003909!2.43e-07!1;UBERON:0003835!2.43e-07!1;UBERON:0003513!2.43e-07!1;UBERON:0001281!2.43e-07!1;UBERON:0001280!2.43e-07!1;UBERON:0004647!2.43e-07!1 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0.140788722151667,0,0,0,0.856003649656029,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,3.35883485576779,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:18890493..18890502,- | |||
}} |
Revision as of 16:20, 12 September 2013
Short description: | p@chr10:18890493..18890502, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:18890493..18890502, - |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.15e-19 | 1 |
regulatory T cell | 1.74e-18 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.74e-18 | 1 |
mature alpha-beta T cell | 3.01e-18 | 9 |
alpha-beta T cell | 3.01e-18 | 9 |
immature T cell | 3.01e-18 | 9 |
mature T cell | 3.01e-18 | 9 |
immature alpha-beta T cell | 3.01e-18 | 9 |
T cell | 4.28e-15 | 11 |
pro-T cell | 4.28e-15 | 11 |
lymphoid lineage restricted progenitor cell | 6.55e-14 | 12 |
lymphocyte | 6.61e-13 | 13 |
common lymphoid progenitor | 6.61e-13 | 13 |
leukocyte | 4.62e-10 | 17 |
nongranular leukocyte | 4.62e-10 | 17 |
CD4-positive, alpha-beta T cell | 1.08e-09 | 8 |
hematopoietic lineage restricted progenitor cell | 4.44e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.