FFCP PHASE1:Mm9::chr10:66559584..66559614,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=28193|HGNC=|UniProt=Q99KK1|association_with_transcript=0bp_to_ENSMUST00000020023,uc007flq.1,uc011xfn.1_5end|description=CAGE_peak_3_at_Reep3_5end|id=chr10:66559584..66559614,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.18e-07,61;UBERON:0009142,1.18e-07,61|phase1_expression=8.0074423552397,9.42233600626275,3.18499467572675,6.0492842261366,4.50806156951712,3.02182689441402,1.86890112476421,0.258246646883153,0.703943610758334,0.70219357896598,0.34243593645101,0.159544317990673,0.171200729931206,0.174840804837995,1.33243904726265,1.61980213911861,0.699561878128147,1.10411757875383,0.959801035240171,1.27316895539409,5.86798702042381,2.87943758482567,3.39559725880616,6.07971206614945,4.5881856213434,5.16808767703518,5.1691439539089,4.30942465371778,11.5914285868388,10.0812051903972,7.76056787293567,0,0,0,2.02196133825892,1.49611180822643,1.63335485009895,10.8818223991596,7.0320181007142,14.6586648312664,7.05877785637217,7.5135003345429,13.1087795318411,5.5394599909254,4.8660926985367,5.32285581268876,3.12956537739216,2.39827672018491,3.07560655828261,2.3331587888914,4.05960622713551,4.31257693094915,0.167782606057736,0.725362142011344,0.336093799142464,2.31533492432352,1.71920063963254,2.57836046138721,3.64169629547276,2.64495489636016,4.43681982454325,2.37191172448392,1.77858959222228,1.3498495759221,3.9554654502679,1.4209602298922,1.79760066311043,1.92109152660777,3.52544681848824,1.4850653216486,2.10324961351382,8.2838785477103,9.93908434282261,2.20483438586917,1.62937300731002,0.919218786610021,2.20231761998777,7.91661496128164,7.52672012955593,3.16527090552465,3.11057988248193,3.64639359389732,7.2587579740359,7.87867654044352,6.26472815884921,4.41942878210502,4.8406371471695,4.28718725398191,9.99585751998029,11.7135918165518,11.5945795480671,11.185510400758,4.75979933595425,9.17495425784289,15.5946340187441,16.1289679355041,8.00533194750986,20.4516387093669,20.0035223544209,15.546941278455,6.05626705039726,7.69958864485907,5.09610479413291,0,2.38140145112336,3.80039798212648,3.53867111510348,10.9616524530298,7.50919862576798,6.97678053604676,4.3371331691534,5.1759131313064,4.84292544237723,5.72746034099966,8.58397562090645,7.79132866243988,7.91023896749996,18.6533170426686,6.19227386364912,8.7354098971601,6.8460870722722,5.81850303762267,3.72783522436244,8.78342391034641,14.6612694769419,5.10914110417183,1.1981512450592,0,1.65191295194984,6.74057877321702,5.03250663100489,3.26701315493447,4.51943232499919,6.90431734791892,8.3115217823824,9.08551073179443,6.72139801412087,8.8328949133166,10.6143558542143,3.36706969418358,5.33493816147085,3.44853156650209,4.50155324513373,3.46621081022145,5.91917542616552,4.61209393025459,6.74652416830048,4.65666067330228,1.07783996466421,2.26927296201383,2.11141348996739,1.97276159184817,3.05851974148158,3.48252166522167,4.93877127379064,5.37392520409932,0,1.28673953557358,0.852490498186778,3.93538967817454,4.22146907965973,4.14142741360334,4.02466050494857,4.9191057936851,5.24508183817086,6.51095045301142,3.21928081679543,8.29033930806903,9.37991144506839,12.6408947340903,9.24184428822755,7.60239934611728,9.22110484222413,8.05238512562231,4.41608891984667,8.23236899034275,14.5384264512871,3.70230793328962,3.19932375802851,3.94802342162745,4.25262622362908,4.63872106633688,4.89231696458715,4.94586627892654,9.49058123089023,9.88193728344065,11.3100843960121,6.76452004939913,9.35827618171777,6.29173586057955,9.94235029423593,8.96135729644652,3.79335801906163,4.34144347916969,3.38123207019241,8.14605311381257,5.23671715352589,9.11765658574141,11.3825766823663,10.9231509504906,10.5189147653721,11.105744752962,15.7119892356189,1.33476084572875,1.76903095601883,1.12431056192427,2.43432145666204,1.92941727801933,2.80088436959562,2.87696137450811,7.29608520487659,9.33508804839477,12.9391385874619,7.44281895337007,13.4176199439261,17.6805214562978,14.351793081753,17.3679667690812,10.3461786493299,3.22135400009824,2.28150967018836,2.20668611507745,2.34690248288502,4.18765643604539,5.2369600994923,9.95181604074774,10.719189799221,11.5161638617363,11.4807433433391,8.1931657357869,8.97961905702657,10.8486793936134,6.03165135757089,5.4390568381871,4.42587845717133,2.20749397043786,11.559642479121,18.2850231083837,7.70494243270374,6.31177318010932,4.10160685241134,3.12350995437311,6.03185513651837,4.77937595905104,5.56996685205985,6.79383673893198,6.07216052512342,4.9683495844923,5.13874111330481,4.81981974632711,8.94222536812092,4.62970569534864,7.16702621155735,8.57844639457184,7.96470830039777,1.69946445308487,3.02323556964751,2.64047111658257,5.90603785761546,3.3817866273832,9.04499026088774,6.5436071305951,5.70395805415554,5.05658812697306,4.21674434299995,6.18813259489121,8.5109901438447,4.32146625675145,4.2688365648309,4.71541477069503,5.32020700926821,5.35106452806212,7.56925494769756,5.1759041349481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| ||
|EntrezGene=28193 | |||
|HGNC= | |||
|UniProt=Q99KK1 | |||
|association_with_transcript=0bp_to_ENSMUST00000020023,uc007flq.1,uc011xfn.1_5end | |||
|description=CAGE_peak_3_at_Reep3_5end | |||
|id=chr10:66559584..66559614,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.18e-07,61;UBERON:0009142,1.18e-07,61 | |||
|phase1_expression=8.0074423552397,9.42233600626275,3.18499467572675,6.0492842261366,4.50806156951712,3.02182689441402,1.86890112476421,0.258246646883153,0.703943610758334,0.70219357896598,0.34243593645101,0.159544317990673,0.171200729931206,0.174840804837995,1.33243904726265,1.61980213911861,0.699561878128147,1.10411757875383,0.959801035240171,1.27316895539409,5.86798702042381,2.87943758482567,3.39559725880616,6.07971206614945,4.5881856213434,5.16808767703518,5.1691439539089,4.30942465371778,11.5914285868388,10.0812051903972,7.76056787293567,0,0,0,2.02196133825892,1.49611180822643,1.63335485009895,10.8818223991596,7.0320181007142,14.6586648312664,7.05877785637217,7.5135003345429,13.1087795318411,5.5394599909254,4.8660926985367,5.32285581268876,3.12956537739216,2.39827672018491,3.07560655828261,2.3331587888914,4.05960622713551,4.31257693094915,0.167782606057736,0.725362142011344,0.336093799142464,2.31533492432352,1.71920063963254,2.57836046138721,3.64169629547276,2.64495489636016,4.43681982454325,2.37191172448392,1.77858959222228,1.3498495759221,3.9554654502679,1.4209602298922,1.79760066311043,1.92109152660777,3.52544681848824,1.4850653216486,2.10324961351382,8.2838785477103,9.93908434282261,2.20483438586917,1.62937300731002,0.919218786610021,2.20231761998777,7.91661496128164,7.52672012955593,3.16527090552465,3.11057988248193,3.64639359389732,7.2587579740359,7.87867654044352,6.26472815884921,4.41942878210502,4.8406371471695,4.28718725398191,9.99585751998029,11.7135918165518,11.5945795480671,11.185510400758,4.75979933595425,9.17495425784289,15.5946340187441,16.1289679355041,8.00533194750986,20.4516387093669,20.0035223544209,15.546941278455,6.05626705039726,7.69958864485907,5.09610479413291,0,2.38140145112336,3.80039798212648,3.53867111510348,10.9616524530298,7.50919862576798,6.97678053604676,4.3371331691534,5.1759131313064,4.84292544237723,5.72746034099966,8.58397562090645,7.79132866243988,7.91023896749996,18.6533170426686,6.19227386364912,8.7354098971601,6.8460870722722,5.81850303762267,3.72783522436244,8.78342391034641,14.6612694769419,5.10914110417183,1.1981512450592,0,1.65191295194984,6.74057877321702,5.03250663100489,3.26701315493447,4.51943232499919,6.90431734791892,8.3115217823824,9.08551073179443,6.72139801412087,8.8328949133166,10.6143558542143,3.36706969418358,5.33493816147085,3.44853156650209,4.50155324513373,3.46621081022145,5.91917542616552,4.61209393025459,6.74652416830048,4.65666067330228,1.07783996466421,2.26927296201383,2.11141348996739,1.97276159184817,3.05851974148158,3.48252166522167,4.93877127379064,5.37392520409932,0,1.28673953557358,0.852490498186778,3.93538967817454,4.22146907965973,4.14142741360334,4.02466050494857,4.9191057936851,5.24508183817086,6.51095045301142,3.21928081679543,8.29033930806903,9.37991144506839,12.6408947340903,9.24184428822755,7.60239934611728,9.22110484222413,8.05238512562231,4.41608891984667,8.23236899034275,14.5384264512871,3.70230793328962,3.19932375802851,3.94802342162745,4.25262622362908,4.63872106633688,4.89231696458715,4.94586627892654,9.49058123089023,9.88193728344065,11.3100843960121,6.76452004939913,9.35827618171777,6.29173586057955,9.94235029423593,8.96135729644652,3.79335801906163,4.34144347916969,3.38123207019241,8.14605311381257,5.23671715352589,9.11765658574141,11.3825766823663,10.9231509504906,10.5189147653721,11.105744752962,15.7119892356189,1.33476084572875,1.76903095601883,1.12431056192427,2.43432145666204,1.92941727801933,2.80088436959562,2.87696137450811,7.29608520487659,9.33508804839477,12.9391385874619,7.44281895337007,13.4176199439261,17.6805214562978,14.351793081753,17.3679667690812,10.3461786493299,3.22135400009824,2.28150967018836,2.20668611507745,2.34690248288502,4.18765643604539,5.2369600994923,9.95181604074774,10.719189799221,11.5161638617363,11.4807433433391,8.1931657357869,8.97961905702657,10.8486793936134,6.03165135757089,5.4390568381871,4.42587845717133,2.20749397043786,11.559642479121,18.2850231083837,7.70494243270374,6.31177318010932,4.10160685241134,3.12350995437311,6.03185513651837,4.77937595905104,5.56996685205985,6.79383673893198,6.07216052512342,4.9683495844923,5.13874111330481,4.81981974632711,8.94222536812092,4.62970569534864,7.16702621155735,8.57844639457184,7.96470830039777,1.69946445308487,3.02323556964751,2.64047111658257,5.90603785761546,3.3817866273832,9.04499026088774,6.5436071305951,5.70395805415554,5.05658812697306,4.21674434299995,6.18813259489121,8.5109901438447,4.32146625675145,4.2688365648309,4.71541477069503,5.32020700926821,5.35106452806212,7.56925494769756,5.17590413494819,5.63212099352905,6.35496212591461,11.0264199027481,3.79238381765404,6.62004149453213,6.6947346670253,4.17803204010978,2.79039529566604,10.7847909553045,16.5028518789354,2.39219233116994,2.47664241555867,2.96311243791539,2.82552685507037,1.50363650493128,1.60144721244566,1.35982743995084,1.95932033253121,1.52019971184866,5.72802370809068,3.16335993581135,4.87966721104437,4.10420295122845,5.64538399239065,6.11415178489297,7.9569964367044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| |||
|short_description=p3@Reep3 | |||
}} | |||
Revision as of 17:10, 12 September 2013
| Short description: | p3@Reep3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Reep3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000020023, uc007flq.1, uc011xfn.1_5end |
| EntrezGene: | Reep3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesenchyme | 1.18e-07 | 61 |
| entire embryonic mesenchyme | 1.18e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
