FFCP PHASE1:Mm9::chr10:70644765..70644806,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319572|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=0bp_to_NR_038040,uc007foj.1,uc007fok.1_5end|description=CAGE_peak_1_at_C730027H18Rik_5end|id=chr10:70644765..70644806,-|ontology_enrichment_celltype=CL:0000181!1.19e-08!5;CL:0000417!1.19e-08!5;CL:0000668!1.19e-08!5;CL:0000412!1.19e-08!5;CL:0000182!1.19e-08!5|ontology_enrichment_celltype_v019_2=CL:0000182,5.49e-14,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!6.14e-15!49;UBERON:0005173!6.14e-15!49;UBERON:0002417!6.14e-15!49;UBERON:0000916!6.14e-15!49;UBERON:0005177!7.94e-15!85;UBERON:0002107!4.24e-14!22;UBERON:0007499!4.24e-14!22;UBERON:0006925!4.24e-14!22;UBERON:0009497!4.24e-14!22;UBERON:0000015!4.24e-14!22;UBERON:0002423!4.24e-14!22;UBERON:0006235!4.24e-14!22;UBERON:0008835!4.24e-14!22;UBERON:0003894!4.24e-14!22;UBERON:0004161!4.24e-14!22;UBERON:0008836!4.24e-14!22;UBERON:0009854!2.86e-13!23;UBERON:0009856!2.86e-13!23;UBERON:0001264!3.03e-12!12;UBERON:0003922!3.03e-12!12;UBERON:0002114!3.03e-12!12;UBERON:0003923!3.03e-12!12;UBERON:0003924!3.03e-12!12;UBERON:0003921!3.03e-12!12;UBERON:0002365!8.12e-12!25;UBERON:0002330!8.12e-12!25;UBERON:0002100!2.15e-11!98;UBERON:0001045!4.47e-11!13;UBERON:0000160!3.78e-09!43;UBERON:0009569!4.93e-09!66;UBERON:0001007!9.18e-09!128;UBERON:0001555!9.18e-09!128;UBERON:0007026!9.18e-09!128;UBERON:0002113!1.47e-08!14;UBERON:0003918!1.47e-08!14;UBERON:0005095!1.47e-08!14;UBERON:0007687!1.47e-08!14;UBERON:0002108!1.84e-08!16;UBERON:0004119!1.86e-08!130;UBERON:0000925!1.86e-08!130;UBERON:0006595!1.86e-08!130;UBERON:0000949!2.52e-08!72;UBERON:0004921!1.02e-07!126;UBERON:0004185!1.02e-07!126;UBERON:0000466!1.27e-07!79;UBERON:0003104!1.38e-07!131;UBERON:0009142!1.38e-07!131;UBERON:0005409!3.21e-07!59;UBERON:0006554!3.54e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.40e-24,79;UBERON:0002100,1.48e-20,90;UBERON:0005172,7.24e-19,49;UBERON:0005173,7.24e-19,49;UBERON:0002417,7.24e-19,49;UBERON:0000916,7.24e-19,49;UBERON:0002107,6.86e-18,22;UBERON:0007499,6.86e-18,22;UBERON:0006925,6.86e-18,22;UBERON:0009497,6.86e-18,22;UBERON:0000015,6.86e-18,22;UBERON:0002423,6.86e-18,22;UBERON:0006235,6.86e-18,22;UBERON:0008835,6.86e-18,22;UBERON:0003894,6.86e-18,22;UBERON:0004161,6.86e-18,22;UBERON:0008836,6.86e-18,22;UBERON:0001264,3.15e-17,12;UBERON:0009854,5.58e-17,23;UBERON:0009856,5.58e-17,23;UBERON:0002365,2.23e-15,25;UBERON:0002330,2.23e-15,25;UBERON:0003104,3.62e-14,61;UBERON:0009142,3.62e-14,61;UBERON:0000949,3.08e-13,72;UBERON:0009569,1.02e-12,66;UBERON:0002113,2.50e-10,14;UBERON:0003918,2.50e-10,14;UBERON:0011143,2.50e-10,14;UBERON:0005095,2.50e-10,14;UBERON:0007687,2.50e-10,14;UBERON:0002075,3.34e-10,19;UBERON:0006554,9.86e-08,18;UBERON:0001008,2.96e-07,19;UBERON:0005256,3.06e-07,45;UBERON:0003914,8.19e-07,47|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0.95995453676044,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,32.6961073252927,32.638624017972,29.1439723484421,41.5856907166508,28.2256938871321,6.60088774619234,0,0,0,0,0,0,0,0,0,0,9.02052649780574,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902072229254653,3.83198696784351,1.55664630691409,0.951128130562796,0.949058123089023,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0.571242563048644,2.25415471346161,2.24016460629846,2.13347735884388,2.59502533594179,8.91635173452028,9.88987991463334,18.6828486131236,18.0159859325829,16.8977997439675,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,2.87536413054709,1.48856379067401,2.18426371180192,15.4073115547738,25.6538301336334,28.946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,2.65490276679926,1.21390318077491,0.906970670894253,1.69744571780308,1.18120757152309,1.84461088766356,1.03371317267288,2.54473610634254,2.85197902707777,3.16036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0.50695859978048,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0,0,0.407412341537585,0,0,0.197008964751127,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p1@C730027H18Rik}} | ||
|EntrezGene=319572 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_038040,uc007foj.1,uc007fok.1_5end | |||
|description=CAGE_peak_1_at_C730027H18Rik_5end | |||
|id=chr10:70644765..70644806,- | |||
|ontology_enrichment_celltype=CL:0000181!1.19e-08!5;CL:0000417!1.19e-08!5;CL:0000668!1.19e-08!5;CL:0000412!1.19e-08!5;CL:0000182!1.19e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.49e-14,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.14e-15!49;UBERON:0005173!6.14e-15!49;UBERON:0002417!6.14e-15!49;UBERON:0000916!6.14e-15!49;UBERON:0005177!7.94e-15!85;UBERON:0002107!4.24e-14!22;UBERON:0007499!4.24e-14!22;UBERON:0006925!4.24e-14!22;UBERON:0009497!4.24e-14!22;UBERON:0000015!4.24e-14!22;UBERON:0002423!4.24e-14!22;UBERON:0006235!4.24e-14!22;UBERON:0008835!4.24e-14!22;UBERON:0003894!4.24e-14!22;UBERON:0004161!4.24e-14!22;UBERON:0008836!4.24e-14!22;UBERON:0009854!2.86e-13!23;UBERON:0009856!2.86e-13!23;UBERON:0001264!3.03e-12!12;UBERON:0003922!3.03e-12!12;UBERON:0002114!3.03e-12!12;UBERON:0003923!3.03e-12!12;UBERON:0003924!3.03e-12!12;UBERON:0003921!3.03e-12!12;UBERON:0002365!8.12e-12!25;UBERON:0002330!8.12e-12!25;UBERON:0002100!2.15e-11!98;UBERON:0001045!4.47e-11!13;UBERON:0000160!3.78e-09!43;UBERON:0009569!4.93e-09!66;UBERON:0001007!9.18e-09!128;UBERON:0001555!9.18e-09!128;UBERON:0007026!9.18e-09!128;UBERON:0002113!1.47e-08!14;UBERON:0003918!1.47e-08!14;UBERON:0005095!1.47e-08!14;UBERON:0007687!1.47e-08!14;UBERON:0002108!1.84e-08!16;UBERON:0004119!1.86e-08!130;UBERON:0000925!1.86e-08!130;UBERON:0006595!1.86e-08!130;UBERON:0000949!2.52e-08!72;UBERON:0004921!1.02e-07!126;UBERON:0004185!1.02e-07!126;UBERON:0000466!1.27e-07!79;UBERON:0003104!1.38e-07!131;UBERON:0009142!1.38e-07!131;UBERON:0005409!3.21e-07!59;UBERON:0006554!3.54e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.40e-24,79;UBERON:0002100,1.48e-20,90;UBERON:0005172,7.24e-19,49;UBERON:0005173,7.24e-19,49;UBERON:0002417,7.24e-19,49;UBERON:0000916,7.24e-19,49;UBERON:0002107,6.86e-18,22;UBERON:0007499,6.86e-18,22;UBERON:0006925,6.86e-18,22;UBERON:0009497,6.86e-18,22;UBERON:0000015,6.86e-18,22;UBERON:0002423,6.86e-18,22;UBERON:0006235,6.86e-18,22;UBERON:0008835,6.86e-18,22;UBERON:0003894,6.86e-18,22;UBERON:0004161,6.86e-18,22;UBERON:0008836,6.86e-18,22;UBERON:0001264,3.15e-17,12;UBERON:0009854,5.58e-17,23;UBERON:0009856,5.58e-17,23;UBERON:0002365,2.23e-15,25;UBERON:0002330,2.23e-15,25;UBERON:0003104,3.62e-14,61;UBERON:0009142,3.62e-14,61;UBERON:0000949,3.08e-13,72;UBERON:0009569,1.02e-12,66;UBERON:0002113,2.50e-10,14;UBERON:0003918,2.50e-10,14;UBERON:0011143,2.50e-10,14;UBERON:0005095,2.50e-10,14;UBERON:0007687,2.50e-10,14;UBERON:0002075,3.34e-10,19;UBERON:0006554,9.86e-08,18;UBERON:0001008,2.96e-07,19;UBERON:0005256,3.06e-07,45;UBERON:0003914,8.19e-07,47 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0.95995453676044,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,32.6961073252927,32.638624017972,29.1439723484421,41.5856907166508,28.2256938871321,6.60088774619234,0,0,0,0,0,0,0,0,0,0,9.02052649780574,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902072229254653,3.83198696784351,1.55664630691409,0.951128130562796,0.949058123089023,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0.571242563048644,2.25415471346161,2.24016460629846,2.13347735884388,2.59502533594179,8.91635173452028,9.88987991463334,18.6828486131236,18.0159859325829,16.8977997439675,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,2.87536413054709,1.48856379067401,2.18426371180192,15.4073115547738,25.6538301336334,28.946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,2.65490276679926,1.21390318077491,0.906970670894253,1.69744571780308,1.18120757152309,1.84461088766356,1.03371317267288,2.54473610634254,2.85197902707777,3.16036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0.50695859978048,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0,0,0.407412341537585,0,0,0.197008964751127,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p1@C730027H18Rik | |||
}} |
Revision as of 17:18, 12 September 2013
Short description: | p1@C730027H18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C730027H18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_NR_038040, uc007foj.1, uc007fok.1_5end |
EntrezGene: | C730027H18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.49e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.40e-24 | 79 |
trunk | 1.48e-20 | 90 |
abdomen element | 7.24e-19 | 49 |
abdominal segment element | 7.24e-19 | 49 |
abdominal segment of trunk | 7.24e-19 | 49 |
abdomen | 7.24e-19 | 49 |
liver | 6.86e-18 | 22 |
epithelial sac | 6.86e-18 | 22 |
digestive gland | 6.86e-18 | 22 |
epithelium of foregut-midgut junction | 6.86e-18 | 22 |
anatomical boundary | 6.86e-18 | 22 |
hepatobiliary system | 6.86e-18 | 22 |
foregut-midgut junction | 6.86e-18 | 22 |
hepatic diverticulum | 6.86e-18 | 22 |
liver primordium | 6.86e-18 | 22 |
septum transversum | 6.86e-18 | 22 |
liver bud | 6.86e-18 | 22 |
pancreas | 3.15e-17 | 12 |
digestive tract diverticulum | 5.58e-17 | 23 |
sac | 5.58e-17 | 23 |
exocrine gland | 2.23e-15 | 25 |
exocrine system | 2.23e-15 | 25 |
mesenchyme | 3.62e-14 | 61 |
entire embryonic mesenchyme | 3.62e-14 | 61 |
endocrine system | 3.08e-13 | 72 |
subdivision of trunk | 1.02e-12 | 66 |
kidney | 2.50e-10 | 14 |
kidney mesenchyme | 2.50e-10 | 14 |
upper urinary tract | 2.50e-10 | 14 |
kidney rudiment | 2.50e-10 | 14 |
kidney field | 2.50e-10 | 14 |
viscus | 3.34e-10 | 19 |
urinary system structure | 9.86e-08 | 18 |
renal system | 2.96e-07 | 19 |
trunk mesenchyme | 3.06e-07 | 45 |
epithelial tube | 8.19e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.