FFCP PHASE1:Hg19::chr2:68615063..68615089,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5341|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9070|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000474788_5end|coexpression_cluster_id=C0|description=CAGE_peak_4_at_PLEK_5end|id=chr2:68615063..68615089,+|ontology_enrichment_celltype=CL:0002057!1.54e-70!42;CL:0000860!5.55e-65!45;CL:0000738!2.16e-54!140;CL:0000766!1.38e-49!76;CL:0002031!1.04e-47!124;CL:0000839!2.11e-47!70;CL:0002087!6.44e-47!119;CL:0000037!2.00e-45!172;CL:0000566!2.00e-45!172;CL:0002032!8.38e-45!165;CL:0000837!8.38e-45!165;CL:0002194!3.37e-44!63;CL:0000576!3.37e-44!63;CL:0000040!3.37e-44!63;CL:0000559!3.37e-44!63;CL:0002009!1.79e-42!65;CL:0000557!6.44e-42!71;CL:0000988!7.32e-42!182;CL:0000763!8.64e-39!112;CL:0000049!8.64e-39!112;CL:0000134!1.13e-12!358;CL:0002320!4.40e-12!365;CL:0002393!4.69e-10!9;CL:0002397!4.69e-10!9;CL:0000219!5.02e-10!390;CL:0000945!6.60e-10!24;CL:0000826!6.60e-10!24;CL:0000048!1.47e-08!430;CL:0000723!3.36e-08!436;CL:0000034!9.69e-08!444;CL:0000838!5.42e-07!52;CL:0000542!8.70e-07!53;CL:0000051!8.70e-07!53|ontology_enrichment_celltype_v019=CL:0000860;7.10e-74;33!CL:0002057;7.10e-74;33!CL:0000473;5.68e-50;39!CL:0000234;5.68e-50;39!CL:0000576;9.09e-42;48!CL:0000766;4.14e-28;69!CL:0002087;2.71e-15;104!CL:0000763;3.15e-11;100!CL:0000738;2.29e-10;136!CL:0000945;3.04e-07;24|ontology_enrichment_celltype_v019_2=CL:0000860,3.38e-76,42;CL:0002057,3.38e-76,42;CL:0000473,8.88e-66,48;CL:0000234,8.88e-66,48;CL:0002194,3.44e-51,59;CL:0000576,3.44e-51,59;CL:0000040,3.44e-51,59;CL:0000559,3.44e-51,59;CL:0000766,3.30e-50,72;CL:0002009,2.62e-49,61;CL:0000839,2.42e-48,66;CL:0000557,2.51e-44,67;CL:0002087,3.43e-40,115;CL:0000738,4.73e-39,136;CL:0002031,3.80e-38,120;CL:0000763,3.08e-33,108;CL:0000049,3.08e-33,108;CL:0000037,9.82e-32,168;CL:0002032,1.25e-31,161;CL:0000837,1.25e-31,161;CL:0000988,1.13e-29,177;CL:0000134,2.21e-10,354;CL:0002320,5.24e-10,361;CL:0000219,1.08e-08,386;CL:0000945,2.86e-07,24;CL:0000826,2.86e-07,24;CL:0000048,4.33e-07,427;CL:0000723,7.19e-07,433|ontology_enrichment_development_v019=CL:0002057;2.76e-54;42!CL:0000049;5.38e-09;108|ontology_enrichment_disease=DOID:0060058!8.79e-07!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.28e-51!102;UBERON:0003061!2.28e-51!102;UBERON:0002193!6.45e-51!112;UBERON:0002371!8.37e-36!80;UBERON:0001474!1.93e-32!86;UBERON:0002405!1.40e-30!115;UBERON:0004765!8.53e-26!101;UBERON:0001434!8.53e-26!101;UBERON:0003081!8.50e-17!216;UBERON:0000178!5.89e-13!15;UBERON:0000179!5.89e-13!15;UBERON:0000463!5.89e-13!15;UBERON:0002384!2.78e-11!375;UBERON:0002204!5.03e-11!167|ontology_enrichment_uberon_v019=UBERON:0000178;2.93e-16;15!UBERON:0000179;2.93e-16;15!UBERON:0000463;2.93e-16;15!UBERON:0002390;1.65e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.54e-52,98;UBERON:0003061,5.54e-52,98;UBERON:0002193,2.02e-46,108;UBERON:0002371,2.61e-38,76;UBERON:0001474,5.04e-35,82;UBERON:0002405,1.58e-32,93;UBERON:0004765,2.56e-31,90;UBERON:0001434,1.63e-27,100;UBERON:0003081,9.04e-21,203;UBERON:0000178,2.96e-16,15;UBERON:0000179,2.96e-16,15;UBERON:0000463,2.96e-16,15;UBERON:0002204,9.28e-14,167;UBERON:0000926,2.29e-10,315;UBERON:0004120,2.29e-10,315;UBERON:0006603,2.29e-10,315;UBERON:0002384,1.69e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81404456212093,5.17233713534658,4.95877922276179,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,0,1.70603078984906,0,1.10799081706375,3.00816671205213,2.82114131930607,0,0,0,0.436194716338694,0.755751887377619,1.21292030593908,3.48643555358527,11.1015329765893,8.981484755958,4.89077066947656,6.40401766322752,3.78371567821736,28.958637181876,44.538443167284,43.3364757101894,0.752969358170419,2.18324920046277,2.69668181334102,25.4049630667849,21.1813157870222,29.4095077867559,0,1.79517291859469,1.27867425159808,26.9894591924583,44.2560475259089,28.0270012048009,2.51248665256743,11.4726242052444,4.34377689410233,31.4807741369352,56.3464783060974,42.7224223045194,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0.450530678524519,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,1.70763890732835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,1.49801404789436,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5341 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9070 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000474788_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_PLEK_5end | |||
|id=chr2:68615063..68615089,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.54e-70!42;CL:0000860!5.55e-65!45;CL:0000738!2.16e-54!140;CL:0000766!1.38e-49!76;CL:0002031!1.04e-47!124;CL:0000839!2.11e-47!70;CL:0002087!6.44e-47!119;CL:0000037!2.00e-45!172;CL:0000566!2.00e-45!172;CL:0002032!8.38e-45!165;CL:0000837!8.38e-45!165;CL:0002194!3.37e-44!63;CL:0000576!3.37e-44!63;CL:0000040!3.37e-44!63;CL:0000559!3.37e-44!63;CL:0002009!1.79e-42!65;CL:0000557!6.44e-42!71;CL:0000988!7.32e-42!182;CL:0000763!8.64e-39!112;CL:0000049!8.64e-39!112;CL:0000134!1.13e-12!358;CL:0002320!4.40e-12!365;CL:0002393!4.69e-10!9;CL:0002397!4.69e-10!9;CL:0000219!5.02e-10!390;CL:0000945!6.60e-10!24;CL:0000826!6.60e-10!24;CL:0000048!1.47e-08!430;CL:0000723!3.36e-08!436;CL:0000034!9.69e-08!444;CL:0000838!5.42e-07!52;CL:0000542!8.70e-07!53;CL:0000051!8.70e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.10e-74;33!CL:0002057;7.10e-74;33!CL:0000473;5.68e-50;39!CL:0000234;5.68e-50;39!CL:0000576;9.09e-42;48!CL:0000766;4.14e-28;69!CL:0002087;2.71e-15;104!CL:0000763;3.15e-11;100!CL:0000738;2.29e-10;136!CL:0000945;3.04e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.38e-76,42;CL:0002057,3.38e-76,42;CL:0000473,8.88e-66,48;CL:0000234,8.88e-66,48;CL:0002194,3.44e-51,59;CL:0000576,3.44e-51,59;CL:0000040,3.44e-51,59;CL:0000559,3.44e-51,59;CL:0000766,3.30e-50,72;CL:0002009,2.62e-49,61;CL:0000839,2.42e-48,66;CL:0000557,2.51e-44,67;CL:0002087,3.43e-40,115;CL:0000738,4.73e-39,136;CL:0002031,3.80e-38,120;CL:0000763,3.08e-33,108;CL:0000049,3.08e-33,108;CL:0000037,9.82e-32,168;CL:0002032,1.25e-31,161;CL:0000837,1.25e-31,161;CL:0000988,1.13e-29,177;CL:0000134,2.21e-10,354;CL:0002320,5.24e-10,361;CL:0000219,1.08e-08,386;CL:0000945,2.86e-07,24;CL:0000826,2.86e-07,24;CL:0000048,4.33e-07,427;CL:0000723,7.19e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-54;42!CL:0000049;5.38e-09;108 | |||
|ontology_enrichment_disease=DOID:0060058!8.79e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-51!102;UBERON:0003061!2.28e-51!102;UBERON:0002193!6.45e-51!112;UBERON:0002371!8.37e-36!80;UBERON:0001474!1.93e-32!86;UBERON:0002405!1.40e-30!115;UBERON:0004765!8.53e-26!101;UBERON:0001434!8.53e-26!101;UBERON:0003081!8.50e-17!216;UBERON:0000178!5.89e-13!15;UBERON:0000179!5.89e-13!15;UBERON:0000463!5.89e-13!15;UBERON:0002384!2.78e-11!375;UBERON:0002204!5.03e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.93e-16;15!UBERON:0000179;2.93e-16;15!UBERON:0000463;2.93e-16;15!UBERON:0002390;1.65e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.54e-52,98;UBERON:0003061,5.54e-52,98;UBERON:0002193,2.02e-46,108;UBERON:0002371,2.61e-38,76;UBERON:0001474,5.04e-35,82;UBERON:0002405,1.58e-32,93;UBERON:0004765,2.56e-31,90;UBERON:0001434,1.63e-27,100;UBERON:0003081,9.04e-21,203;UBERON:0000178,2.96e-16,15;UBERON:0000179,2.96e-16,15;UBERON:0000463,2.96e-16,15;UBERON:0002204,9.28e-14,167;UBERON:0000926,2.29e-10,315;UBERON:0004120,2.29e-10,315;UBERON:0006603,2.29e-10,315;UBERON:0002384,1.69e-09,371 | |||
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|short_description=p4@PLEK | |||
}} |
Revision as of 19:26, 12 September 2013
Short description: | p4@PLEK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PLEK_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000474788_5end |
EntrezGene: | PLEK |
HGNC: | 9070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.38e-76 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.38e-76 | 42 |
defensive cell | 8.88e-66 | 48 |
phagocyte | 8.88e-66 | 48 |
monopoietic cell | 3.44e-51 | 59 |
monocyte | 3.44e-51 | 59 |
monoblast | 3.44e-51 | 59 |
promonocyte | 3.44e-51 | 59 |
myeloid leukocyte | 3.30e-50 | 72 |
macrophage dendritic cell progenitor | 2.62e-49 | 61 |
myeloid lineage restricted progenitor cell | 2.42e-48 | 66 |
granulocyte monocyte progenitor cell | 2.51e-44 | 67 |
nongranular leukocyte | 3.43e-40 | 115 |
leukocyte | 4.73e-39 | 136 |
hematopoietic lineage restricted progenitor cell | 3.80e-38 | 120 |
myeloid cell | 3.08e-33 | 108 |
common myeloid progenitor | 3.08e-33 | 108 |
hematopoietic stem cell | 9.82e-32 | 168 |
hematopoietic oligopotent progenitor cell | 1.25e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-31 | 161 |
hematopoietic cell | 1.13e-29 | 177 |
mesenchymal cell | 2.21e-10 | 354 |
connective tissue cell | 5.24e-10 | 361 |
motile cell | 1.08e-08 | 386 |
lymphocyte of B lineage | 2.86e-07 | 24 |
pro-B cell | 2.86e-07 | 24 |
multi fate stem cell | 4.33e-07 | 427 |
somatic stem cell | 7.19e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.54e-52 | 98 |
blood island | 5.54e-52 | 98 |
hemolymphoid system | 2.02e-46 | 108 |
bone marrow | 2.61e-38 | 76 |
bone element | 5.04e-35 | 82 |
immune system | 1.58e-32 | 93 |
skeletal element | 2.56e-31 | 90 |
skeletal system | 1.63e-27 | 100 |
lateral plate mesoderm | 9.04e-21 | 203 |
blood | 2.96e-16 | 15 |
haemolymphatic fluid | 2.96e-16 | 15 |
organism substance | 2.96e-16 | 15 |
musculoskeletal system | 9.28e-14 | 167 |
mesoderm | 2.29e-10 | 315 |
mesoderm-derived structure | 2.29e-10 | 315 |
presumptive mesoderm | 2.29e-10 | 315 |
connective tissue | 1.69e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.