FFCP PHASE1:Hg19::chr2:77749387..77749405,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80059|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19411|TSSclassifier=S|UniProt=Q86VH4|association_with_transcript=0bp_to_ENST00000409884_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_LRRTM4_5end|id=chr2:77749387..77749405,-|ontology_enrichment_celltype=CL:0000047!3.24e-12!8;CL:0000540!2.55e-09!6;CL:0000031!2.55e-09!6;CL:0000404!2.55e-09!6|ontology_enrichment_celltype_v019=CL:0000047;3.63e-07;2|ontology_enrichment_celltype_v019_2=CL:0000047,2.08e-09,8|ontology_enrichment_development_v019=UBERON:0006601;7.71e-15;82!UBERON:0010122;5.01e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.61e-63!82;UBERON:0005743!1.28e-61!86;UBERON:0000073!9.12e-56!94;UBERON:0001016!9.12e-56!94;UBERON:0001049!2.59e-55!57;UBERON:0005068!2.59e-55!57;UBERON:0006241!2.59e-55!57;UBERON:0007135!2.59e-55!57;UBERON:0007023!4.95e-53!115;UBERON:0002780!6.29e-48!41;UBERON:0001890!6.29e-48!41;UBERON:0006240!6.29e-48!41;UBERON:0003080!1.71e-46!42;UBERON:0000955!3.77e-46!69;UBERON:0006238!3.77e-46!69;UBERON:0002616!1.28e-45!59;UBERON:0002346!8.56e-44!90;UBERON:0001893!1.85e-41!34;UBERON:0003075!2.49e-41!86;UBERON:0007284!2.49e-41!86;UBERON:0002020!3.32e-41!34;UBERON:0003528!3.32e-41!34;UBERON:0002791!6.50e-40!33;UBERON:0001869!6.39e-39!32;UBERON:0002619!3.58e-34!22;UBERON:0000924!1.32e-31!173;UBERON:0006601!1.32e-31!173;UBERON:0001950!2.39e-31!20;UBERON:0003056!6.57e-30!61;UBERON:0004121!1.66e-29!169;UBERON:0000956!2.74e-29!25;UBERON:0000203!2.74e-29!25;UBERON:0000153!1.06e-25!129;UBERON:0007811!1.06e-25!129;UBERON:0000033!2.39e-23!123;UBERON:0002420!1.00e-13!9;UBERON:0007245!1.00e-13!9;UBERON:0010009!1.00e-13!9;UBERON:0010011!1.00e-13!9;UBERON:0000454!1.00e-13!9;UBERON:0002308!2.79e-13!9;UBERON:0000125!2.79e-13!9;UBERON:0000200!3.06e-11!6;UBERON:0001871!7.14e-11!7;UBERON:0004111!8.42e-11!241;UBERON:0009663!8.94e-11!7;UBERON:0000922!1.13e-10!612;UBERON:0000025!2.63e-10!194;UBERON:0003076!3.14e-10!15;UBERON:0003057!3.14e-10!15;UBERON:0002021!1.28e-09!5;UBERON:0001872!1.73e-09!5;UBERON:0000468!3.78e-09!659;UBERON:0000349!8.08e-09!5;UBERON:0002298!9.86e-09!8;UBERON:0000477!1.08e-08!286;UBERON:0000062!3.35e-08!511;UBERON:0002050!4.00e-08!605;UBERON:0005423!4.00e-08!605;UBERON:0000064!5.85e-08!219;UBERON:0001894!8.29e-08!7;UBERON:0006222!8.29e-08!7;UBERON:0000923!1.08e-07!604;UBERON:0005291!1.08e-07!604;UBERON:0006598!1.08e-07!604;UBERON:0002532!1.08e-07!604;UBERON:0000483!1.16e-07!309;UBERON:0000119!2.00e-07!312;UBERON:0000475!2.41e-07!365;UBERON:0000369!3.24e-07!4;UBERON:0002435!3.24e-07!4;UBERON:0000204!3.24e-07!4;UBERON:0010082!3.24e-07!4;UBERON:0000481!6.85e-07!347;UBERON:0004733!7.59e-07!12;UBERON:0002028!7.59e-07!12;UBERON:0007277!7.59e-07!12|ontology_enrichment_uberon_v019=UBERON:0002619;3.30e-64;22!UBERON:0001869;2.84e-62;32!UBERON:0003528;1.41e-60;34!UBERON:0002020;1.41e-60;34!UBERON:0001893;1.96e-60;34!UBERON:0001950;9.91e-59;20!UBERON:0002791;4.17e-58;32!UBERON:0000956;4.62e-56;25!UBERON:0000203;4.62e-56;25!UBERON:0002780;6.45e-51;41!UBERON:0001890;6.45e-51;41!UBERON:0000073;1.09e-39;53!UBERON:0002616;1.09e-39;53!UBERON:0001017;3.00e-31;75!UBERON:0000955;1.76e-28;68!UBERON:0001016;1.36e-23;83!UBERON:0000200;6.48e-20;6!UBERON:0002021;8.02e-17;5!UBERON:0001871;1.13e-16;6!UBERON:0001872;1.36e-16;5!UBERON:0002420;1.21e-15;9!UBERON:0007245;1.21e-15;9!UBERON:0010009;1.21e-15;9!UBERON:0010011;1.21e-15;9!UBERON:0000454;1.21e-15;9!UBERON:0000349;2.05e-15;5!UBERON:0000125;4.92e-15;9!UBERON:0002308;4.92e-15;9!UBERON:0000369;2.15e-12;4!UBERON:0002435;2.15e-12;4!UBERON:0000204;2.15e-12;4!UBERON:0002298;1.94e-11;6!UBERON:0007023;3.65e-11;114!UBERON:0001870;8.30e-11;3!UBERON:0011216;1.03e-10;132!UBERON:0009663;1.75e-10;7!UBERON:0005383;1.19e-09;3!UBERON:0005382;1.19e-09;3!UBERON:0000988;6.13e-09;3!UBERON:0002771;5.86e-08;2!UBERON:0002702;7.75e-08;2!UBERON:0001876;2.57e-07;2!UBERON:0000007;3.74e-07;2!UBERON:0001873;5.01e-07;2!UBERON:0001954;5.01e-07;2!UBERON:0003022;5.01e-07;2!UBERON:0002421;5.01e-07;2!UBERON:0002600;5.01e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-75,81;UBERON:0001049,1.22e-73,56;UBERON:0005068,1.22e-73,56;UBERON:0006241,1.22e-73,56;UBERON:0007135,1.22e-73,56;UBERON:0000073,3.94e-70,53;UBERON:0002616,3.94e-70,53;UBERON:0001893,5.27e-70,34;UBERON:0002780,8.05e-70,41;UBERON:0001890,8.05e-70,41;UBERON:0003080,8.05e-70,41;UBERON:0006240,8.05e-70,41;UBERON:0001869,8.19e-70,32;UBERON:0003528,1.53e-69,34;UBERON:0002020,1.53e-69,34;UBERON:0001016,8.28e-67,89;UBERON:0002791,1.26e-64,32;UBERON:0002619,3.70e-64,22;UBERON:0000955,1.54e-61,68;UBERON:0006238,1.54e-61,68;UBERON:0001950,9.40e-59,20;UBERON:0000956,5.11e-56,25;UBERON:0000203,5.11e-56,25;UBERON:0002346,2.42e-47,86;UBERON:0003075,2.67e-47,82;UBERON:0007284,2.67e-47,82;UBERON:0003056,2.10e-44,61;UBERON:0010371,2.41e-37,104;UBERON:0007023,2.44e-33,114;UBERON:0004121,6.51e-33,171;UBERON:0000924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,0.122241444182866,2.44137706989443,0.665756774185513,0,0|short_description=p3@LRRTM4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=80059 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19411 | |||
|TSSclassifier=S | |||
|UniProt=Q86VH4 | |||
|association_with_transcript=0bp_to_ENST00000409884_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_LRRTM4_5end | |||
|id=chr2:77749387..77749405,- | |||
|ontology_enrichment_celltype=CL:0000047!3.24e-12!8;CL:0000540!2.55e-09!6;CL:0000031!2.55e-09!6;CL:0000404!2.55e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.63e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.08e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.71e-15;82!UBERON:0010122;5.01e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@LRRTM4 | |||
}} |
Revision as of 19:53, 12 September 2013
Short description: | p3@LRRTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LRRTM4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000409884_5end |
EntrezGene: | LRRTM4 |
HGNC: | 19411 |
UniProt: | Q86VH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.08e-09 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.