FFCP PHASE1:Mm9::chr11:52097894..52097919,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:52097894..52097919,-|id=chr11:52097894..52097919,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,2.30e-08,9;CL:0000789,2.30e-08,9;CL:0002420,2.30e-08,9;CL:0002419,2.30e-08,9;CL:0000790,2.30e-08,9;CL:0000084,8.46e-07,11;CL:0000827,8.46e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!4.81e-13!41;UBERON:0001004!2.29e-12!42;UBERON:0002370!1.83e-10!23;UBERON:0000974!1.83e-10!23;UBERON:0004807!1.83e-10!23;UBERON:0005058!1.83e-10!23;UBERON:0003351!1.83e-10!23;UBERON:0009113!1.83e-10!23;UBERON:0003295!1.83e-10!23;UBERON:0009722!1.83e-10!23;UBERON:0005562!1.83e-10!23;UBERON:0007690!1.83e-10!23;UBERON:0001048!4.99e-10!147;UBERON:0005911!8.06e-10!69;UBERON:0000926!1.07e-09!193;UBERON:0004120!1.07e-09!193;UBERON:0006603!1.07e-09!193;UBERON:0006562!1.26e-09!24;UBERON:0003408!1.26e-09!24;UBERON:0001557!1.26e-09!24;UBERON:0001042!1.26e-09!24;UBERON:0008814!1.26e-09!24;UBERON:0009145!1.26e-09!24;UBERON:0003104!2.23e-09!131;UBERON:0009142!2.23e-09!131;UBERON:0005157!1.61e-08!27;UBERON:0001041!5.11e-08!92;UBERON:0000077!7.68e-08!97;UBERON:0004177!1.25e-07!29;UBERON:0000072!1.51e-07!27;UBERON:0002530!1.99e-07!65;UBERON:0002368!2.86e-07!60;UBERON:0000949!2.94e-07!72;UBERON:0004921!3.78e-07!126;UBERON:0004185!3.78e-07!126;UBERON:0003064!4.19e-07!14;UBERON:0002048!9.05e-07!14;UBERON:0000117!9.05e-07!14;UBERON:0000171!9.05e-07!14;UBERON:0000170!9.05e-07!14;UBERON:0005597!9.05e-07!14;UBERON:0000118!9.05e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.20e-39,23;UBERON:0000974,8.20e-39,23;UBERON:0004807,8.20e-39,23;UBERON:0005058,8.20e-39,23;UBERON:0003351,8.20e-39,23;UBERON:0009113,8.20e-39,23;UBERON:0003295,8.20e-39,23;UBERON:0009722,8.20e-39,23;UBERON:0005562,8.20e-39,23;UBERON:0007690,8.20e-39,23;UBERON:0006562,4.73e-37,24;UBERON:0003408,4.73e-37,24;UBERON:0001557,4.73e-37,24;UBERON:0001042,4.73e-37,24;UBERON:0008814,4.73e-37,24;UBERON:0009145,4.73e-37,24;UBERON:0000072,1.50e-32,27;UBERON:0004177,4.59e-30,29;UBERON:0005057,4.59e-30,29;UBERON:0000065,1.32e-25,41;UBERON:0001004,6.62e-25,42;UBERON:0000077,2.59e-24,35;UBERON:0007811,1.54e-23,36;UBERON:0000153,3.89e-19,43;UBERON:0002390,3.95e-18,45;UBERON:0003061,3.95e-18,45;UBERON:0002193,8.92e-17,48;UBERON:0002405,8.92e-17,48;UBERON:0002530,1.98e-16,65;UBERON:0002368,3.83e-16,60;UBERON:0003929,4.83e-16,55;UBERON:0005911,2.74e-15,69;UBERON:0000949,1.90e-14,72;UBERON:0000490,9.45e-13,66;UBERON:0001041,3.13e-11,80;UBERON:0003081,4.44e-10,87;UBERON:0000926,5.10e-09,120;UBERON:0004120,5.10e-09,120;UBERON:0006603,5.10e-09,120;UBERON:0004921,1.20e-07,114;UBERON:0001007,1.90e-07,116;UBERON:0001555,1.90e-07,116;UBERON:0007026,1.90e-07,116;UBERON:0004119,2.98e-07,118;UBERON:0000925,2.98e-07,118;UBERON:0006595,2.98e-07,118;UBERON:0001048,9.59e-07,134|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.387369970324729,0.281577444303333,0,1.02730780935303,0.638177271962691,1.88320802924326,1.66098764596095,0,0,0,0.157731082679119,0.548457734422955,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,1.1554064790051,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0.776813650941515,1.1875371125186,0.693941307064543,0.608930956624282,0.691846491768175,0.60289056221049,0.705532242814229,1.0053327306374,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.611036183101898,0.248813941220186,3.53811861807145,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.605050573870028,0,0,0,0,0,0,0.974820435595601,0,0,0.199141273254367,0.758671603812327,0,0,0.203651327845314,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0.964887042726734,0.369506380333209,0,0.651859905768103,0.339490171550376,0.469380496577004,0.335012514883631,0.714130922658041,0.975668239288994,0.472905432318573,0.8858587585951,1.2756381492599,0.8193165735786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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:52097894..52097919,- | |||
|id=chr11:52097894..52097919,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.30e-08,9;CL:0000789,2.30e-08,9;CL:0002420,2.30e-08,9;CL:0002419,2.30e-08,9;CL:0000790,2.30e-08,9;CL:0000084,8.46e-07,11;CL:0000827,8.46e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!4.81e-13!41;UBERON:0001004!2.29e-12!42;UBERON:0002370!1.83e-10!23;UBERON:0000974!1.83e-10!23;UBERON:0004807!1.83e-10!23;UBERON:0005058!1.83e-10!23;UBERON:0003351!1.83e-10!23;UBERON:0009113!1.83e-10!23;UBERON:0003295!1.83e-10!23;UBERON:0009722!1.83e-10!23;UBERON:0005562!1.83e-10!23;UBERON:0007690!1.83e-10!23;UBERON:0001048!4.99e-10!147;UBERON:0005911!8.06e-10!69;UBERON:0000926!1.07e-09!193;UBERON:0004120!1.07e-09!193;UBERON:0006603!1.07e-09!193;UBERON:0006562!1.26e-09!24;UBERON:0003408!1.26e-09!24;UBERON:0001557!1.26e-09!24;UBERON:0001042!1.26e-09!24;UBERON:0008814!1.26e-09!24;UBERON:0009145!1.26e-09!24;UBERON:0003104!2.23e-09!131;UBERON:0009142!2.23e-09!131;UBERON:0005157!1.61e-08!27;UBERON:0001041!5.11e-08!92;UBERON:0000077!7.68e-08!97;UBERON:0004177!1.25e-07!29;UBERON:0000072!1.51e-07!27;UBERON:0002530!1.99e-07!65;UBERON:0002368!2.86e-07!60;UBERON:0000949!2.94e-07!72;UBERON:0004921!3.78e-07!126;UBERON:0004185!3.78e-07!126;UBERON:0003064!4.19e-07!14;UBERON:0002048!9.05e-07!14;UBERON:0000117!9.05e-07!14;UBERON:0000171!9.05e-07!14;UBERON:0000170!9.05e-07!14;UBERON:0005597!9.05e-07!14;UBERON:0000118!9.05e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.20e-39,23;UBERON:0000974,8.20e-39,23;UBERON:0004807,8.20e-39,23;UBERON:0005058,8.20e-39,23;UBERON:0003351,8.20e-39,23;UBERON:0009113,8.20e-39,23;UBERON:0003295,8.20e-39,23;UBERON:0009722,8.20e-39,23;UBERON:0005562,8.20e-39,23;UBERON:0007690,8.20e-39,23;UBERON:0006562,4.73e-37,24;UBERON:0003408,4.73e-37,24;UBERON:0001557,4.73e-37,24;UBERON:0001042,4.73e-37,24;UBERON:0008814,4.73e-37,24;UBERON:0009145,4.73e-37,24;UBERON:0000072,1.50e-32,27;UBERON:0004177,4.59e-30,29;UBERON:0005057,4.59e-30,29;UBERON:0000065,1.32e-25,41;UBERON:0001004,6.62e-25,42;UBERON:0000077,2.59e-24,35;UBERON:0007811,1.54e-23,36;UBERON:0000153,3.89e-19,43;UBERON:0002390,3.95e-18,45;UBERON:0003061,3.95e-18,45;UBERON:0002193,8.92e-17,48;UBERON:0002405,8.92e-17,48;UBERON:0002530,1.98e-16,65;UBERON:0002368,3.83e-16,60;UBERON:0003929,4.83e-16,55;UBERON:0005911,2.74e-15,69;UBERON:0000949,1.90e-14,72;UBERON:0000490,9.45e-13,66;UBERON:0001041,3.13e-11,80;UBERON:0003081,4.44e-10,87;UBERON:0000926,5.10e-09,120;UBERON:0004120,5.10e-09,120;UBERON:0006603,5.10e-09,120;UBERON:0004921,1.20e-07,114;UBERON:0001007,1.90e-07,116;UBERON:0001555,1.90e-07,116;UBERON:0007026,1.90e-07,116;UBERON:0004119,2.98e-07,118;UBERON:0000925,2.98e-07,118;UBERON:0006595,2.98e-07,118;UBERON:0001048,9.59e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.387369970324729,0.281577444303333,0,1.02730780935303,0.638177271962691,1.88320802924326,1.66098764596095,0,0,0,0.157731082679119,0.548457734422955,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,1.1554064790051,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0.776813650941515,1.1875371125186,0.693941307064543,0.608930956624282,0.691846491768175,0.60289056221049,0.705532242814229,1.0053327306374,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.611036183101898,0.248813941220186,3.53811861807145,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.605050573870028,0,0,0,0,0,0,0.974820435595601,0,0,0.199141273254367,0.758671603812327,0,0,0.203651327845314,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0.964887042726734,0.369506380333209,0,0.651859905768103,0.339490171550376,0.469380496577004,0.335012514883631,0.714130922658041,0.975668239288994,0.472905432318573,0.8858587585951,1.2756381492599,0.81931657357869,0.690739927463582,1.73578870297814,0,0,0,0.275936746304732,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,0,0.567760340833074,0.712262414669021,0.488660878060728,0.164970122972535,2.65490276679926,0,0.302323556964751,0,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0,0,0.120625849856312,0.238744688006273,0,0.874442509889552,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.330613822901344,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,1.01373675294467,0.117357238645754,0,0.209718688851422,0.241584120826006,0.288030006257865,5.05617793005085,1.01362607645082,1.02710957164827,1.68897069871134,4.29664069601955,6.15912199821921,3.846254384639,3.98761723371358,5.45218829719997,4.95344243257499,4.53717833115782,4.97035191772737,5.19543944857779,7.12949103307571,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,2.50786052017682,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.114870937911227,0,0.463537303779422,0.578727661391115,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0,0,0.169229215783353,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0.701794825336225,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr11:52097894..52097919,- | |||
}} |
Revision as of 19:55, 12 September 2013
Short description: | p@chr11:52097894..52097919, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:52097894..52097919, - |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.30e-08 | 9 |
alpha-beta T cell | 2.30e-08 | 9 |
immature T cell | 2.30e-08 | 9 |
mature T cell | 2.30e-08 | 9 |
immature alpha-beta T cell | 2.30e-08 | 9 |
T cell | 8.46e-07 | 11 |
pro-T cell | 8.46e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.