FFCP PHASE1:Mm9::chr11:66771396..66771420,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_ENSMUST00000127166_5end|description=CAGE_peak_2_at_ENSMUST00000127166_5end|id=chr11:66771396..66771420,+|ontology_enrichment_celltype=CL:0002563!1.27e-18!9;CL:0002251!1.27e-18!9;CL:0000239!1.63e-13!6;CL:0000677!1.63e-13!6;CL:0000212!1.63e-13!6;CL:0000584!1.63e-13!6;CL:0000075!1.85e-11!7;CL:0000066!1.35e-10!25;CL:0002076!2.00e-10!15;CL:0000473!3.81e-08!3;CL:0000627!3.81e-08!3;CL:0000682!3.81e-08!3;CL:0000223!2.28e-07!20|ontology_enrichment_celltype_v019_2=CL:0002563,8.46e-22,9;CL:0002251,8.46e-22,9;CL:0000239,1.98e-19,6;CL:0000677,1.98e-19,6;CL:0000584,1.98e-19,6;CL:0000075,1.42e-16,7;CL:0000066,4.80e-14,25;CL:0002076,1.32e-12,15;CL:0000682,2.09e-11,3;CL:0000223,3.72e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.71e-31!15;UBERON:0001242!3.06e-27!13;UBERON:0000060!3.06e-27!13;UBERON:0001262!3.06e-27!13;UBERON:0004786!3.06e-27!13;UBERON:0005409!5.89e-24!59;UBERON:0000160!5.91e-24!43;UBERON:0004923!1.30e-20!24;UBERON:0003350!1.27e-18!9;UBERON:0004808!1.27e-18!9;UBERON:0001277!1.27e-18!9;UBERON:0000485!6.82e-15!11;UBERON:0004119!2.43e-11!130;UBERON:0000925!2.43e-11!130;UBERON:0006595!2.43e-11!130;UBERON:0001007!9.84e-11!128;UBERON:0001555!9.84e-11!128;UBERON:0007026!9.84e-11!128;UBERON:0004921!4.79e-09!126;UBERON:0004185!4.79e-09!126;UBERON:0000331!4.94e-08!3;UBERON:0002116!4.94e-08!3;UBERON:0001204!4.94e-08!3;UBERON:0001168!4.94e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.23e-41,15;UBERON:0000160,7.09e-38,31;UBERON:0001242,1.70e-34,13;UBERON:0001262,1.70e-34,13;UBERON:0004786,1.70e-34,13;UBERON:0005409,3.32e-26,47;UBERON:0004923,1.90e-24,24;UBERON:0003350,8.46e-22,9;UBERON:0004808,8.46e-22,9;UBERON:0001277,8.46e-22,9;UBERON:0000485,1.27e-17,11;UBERON:0002108,5.15e-14,4;UBERON:0000331,3.07e-11,3;UBERON:0002116,3.07e-11,3;UBERON:0001204,3.07e-11,3;UBERON:0001168,3.07e-11,3;UBERON:0001007,2.01e-10,116;UBERON:0001555,2.01e-10,116;UBERON:0007026,2.01e-10,116;UBERON:0004119,3.60e-10,118;UBERON:0000925,3.60e-10,118;UBERON:0006595,3.60e-10,118;UBERON:0004921,2.35e-08,114;UBERON:0001962,8.59e-08,2;UBERON:0001961,8.59e-08,2;UBERON:0001744,8.59e-08,2;UBERON:0001155,3.79e-07,2;UBERON:0000059,3.79e-07,2|phase1_expression=0,9.42233600626275,4.09499315450582,3.32710632437513,4.50806156951712,4.02910252588535,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,4.12936705920906,7.46501553349526,8.18447792702242,10.1271479362368,8.55105387553682,6.04872311423834,7.98229838359097,0,0,0,2.59966457776147,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,3.43785736662608,0,0,0,0,0,0,3.79623249235609,0.164698954724011,0.754005626400808,0,0.779856348476481,3.59527763461689,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.523511883968059,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p2@ENSMUST00000127166}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000127166_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000127166_5end | |||
|id=chr11:66771396..66771420,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.27e-18!9;CL:0002251!1.27e-18!9;CL:0000239!1.63e-13!6;CL:0000677!1.63e-13!6;CL:0000212!1.63e-13!6;CL:0000584!1.63e-13!6;CL:0000075!1.85e-11!7;CL:0000066!1.35e-10!25;CL:0002076!2.00e-10!15;CL:0000473!3.81e-08!3;CL:0000627!3.81e-08!3;CL:0000682!3.81e-08!3;CL:0000223!2.28e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.46e-22,9;CL:0002251,8.46e-22,9;CL:0000239,1.98e-19,6;CL:0000677,1.98e-19,6;CL:0000584,1.98e-19,6;CL:0000075,1.42e-16,7;CL:0000066,4.80e-14,25;CL:0002076,1.32e-12,15;CL:0000682,2.09e-11,3;CL:0000223,3.72e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.71e-31!15;UBERON:0001242!3.06e-27!13;UBERON:0000060!3.06e-27!13;UBERON:0001262!3.06e-27!13;UBERON:0004786!3.06e-27!13;UBERON:0005409!5.89e-24!59;UBERON:0000160!5.91e-24!43;UBERON:0004923!1.30e-20!24;UBERON:0003350!1.27e-18!9;UBERON:0004808!1.27e-18!9;UBERON:0001277!1.27e-18!9;UBERON:0000485!6.82e-15!11;UBERON:0004119!2.43e-11!130;UBERON:0000925!2.43e-11!130;UBERON:0006595!2.43e-11!130;UBERON:0001007!9.84e-11!128;UBERON:0001555!9.84e-11!128;UBERON:0007026!9.84e-11!128;UBERON:0004921!4.79e-09!126;UBERON:0004185!4.79e-09!126;UBERON:0000331!4.94e-08!3;UBERON:0002116!4.94e-08!3;UBERON:0001204!4.94e-08!3;UBERON:0001168!4.94e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.23e-41,15;UBERON:0000160,7.09e-38,31;UBERON:0001242,1.70e-34,13;UBERON:0001262,1.70e-34,13;UBERON:0004786,1.70e-34,13;UBERON:0005409,3.32e-26,47;UBERON:0004923,1.90e-24,24;UBERON:0003350,8.46e-22,9;UBERON:0004808,8.46e-22,9;UBERON:0001277,8.46e-22,9;UBERON:0000485,1.27e-17,11;UBERON:0002108,5.15e-14,4;UBERON:0000331,3.07e-11,3;UBERON:0002116,3.07e-11,3;UBERON:0001204,3.07e-11,3;UBERON:0001168,3.07e-11,3;UBERON:0001007,2.01e-10,116;UBERON:0001555,2.01e-10,116;UBERON:0007026,2.01e-10,116;UBERON:0004119,3.60e-10,118;UBERON:0000925,3.60e-10,118;UBERON:0006595,3.60e-10,118;UBERON:0004921,2.35e-08,114;UBERON:0001962,8.59e-08,2;UBERON:0001961,8.59e-08,2;UBERON:0001744,8.59e-08,2;UBERON:0001155,3.79e-07,2;UBERON:0000059,3.79e-07,2 | |||
|phase1_expression=0,9.42233600626275,4.09499315450582,3.32710632437513,4.50806156951712,4.02910252588535,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,4.12936705920906,7.46501553349526,8.18447792702242,10.1271479362368,8.55105387553682,6.04872311423834,7.98229838359097,0,0,0,2.59966457776147,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,3.43785736662608,0,0,0,0,0,0,3.79623249235609,0.164698954724011,0.754005626400808,0,0.779856348476481,3.59527763461689,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.523511883968059,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@ENSMUST00000127166 | |||
}} |
Revision as of 20:24, 12 September 2013
Short description: | p2@ENSMUST00000127166 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000127166_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000127166_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.46e-22 | 9 |
epithelial cell of alimentary canal | 8.46e-22 | 9 |
brush border epithelial cell | 1.98e-19 | 6 |
gut absorptive cell | 1.98e-19 | 6 |
enterocyte | 1.98e-19 | 6 |
columnar/cuboidal epithelial cell | 1.42e-16 | 7 |
epithelial cell | 4.80e-14 | 25 |
endo-epithelial cell | 1.32e-12 | 15 |
M cell of gut | 2.09e-11 | 3 |
endodermal cell | 3.72e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.23e-41 | 15 |
intestine | 7.09e-38 | 31 |
intestinal mucosa | 1.70e-34 | 13 |
wall of intestine | 1.70e-34 | 13 |
gastrointestinal system mucosa | 1.70e-34 | 13 |
gastrointestinal system | 3.32e-26 | 47 |
organ component layer | 1.90e-24 | 24 |
epithelium of mucosa | 8.46e-22 | 9 |
gastrointestinal system epithelium | 8.46e-22 | 9 |
intestinal epithelium | 8.46e-22 | 9 |
simple columnar epithelium | 1.27e-17 | 11 |
small intestine | 5.15e-14 | 4 |
ileal mucosa | 3.07e-11 | 3 |
ileum | 3.07e-11 | 3 |
mucosa of small intestine | 3.07e-11 | 3 |
wall of small intestine | 3.07e-11 | 3 |
digestive system | 2.01e-10 | 116 |
digestive tract | 2.01e-10 | 116 |
primitive gut | 2.01e-10 | 116 |
endoderm-derived structure | 3.60e-10 | 118 |
endoderm | 3.60e-10 | 118 |
presumptive endoderm | 3.60e-10 | 118 |
subdivision of digestive tract | 2.35e-08 | 114 |
gut-associated lymphoid tissue | 8.59e-08 | 2 |
mucosa-associated lymphoid tissue | 8.59e-08 | 2 |
lymphoid tissue | 8.59e-08 | 2 |
colon | 3.79e-07 | 2 |
large intestine | 3.79e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.