FFCP PHASE1:Hg19::chr3:112357924..112357925,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:112357924..112357925,-|id=chr3:112357924..112357925,-|ontology_enrichment_celltype=CL:0000057!5.51e-20!75;CL:0000055!8.47e-15!180;CL:0002620!5.95e-13!23;CL:0002334!2.74e-12!12;CL:1000306!7.47e-08!4;CL:0002547!7.47e-08!4|ontology_enrichment_celltype_v019=CL:0000135;1.13e-15;3!CL:0002579;1.13e-15;3!CL:0000388;1.13e-15;3!CL:0002334;5.90e-15;12!CL:0002581;2.19e-12;1!CL:0002591;2.19e-12;1!CL:1000306;3.45e-12;4!CL:0002547;3.45e-12;4!CL:0002617;8.05e-07;2!CL:0002596;8.05e-07;2|ontology_enrichment_celltype_v019_2=CL:0002579,5.38e-16,3;CL:0000135,1.53e-15,3;CL:0000388,1.53e-15,3;CL:0002334,4.42e-15,12;CL:0000057,3.22e-13,76;CL:0002581,1.96e-12,1;CL:0002591,2.75e-12,1;CL:1000306,4.83e-12,4;CL:0002547,4.83e-12,4;CL:0002617,5.41e-07,2;CL:0002596,6.80e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000415!7.47e-08!4;UBERON:0007240!7.47e-08!4;UBERON:0005742!7.47e-08!4;UBERON:0005734!7.47e-08!4;UBERON:0004664!7.47e-08!4;UBERON:0004663!7.47e-08!4|ontology_enrichment_uberon_v019=UBERON:0003688;3.90e-17;6!UBERON:0002358;3.90e-17;6!UBERON:0003684;3.90e-17;6!UBERON:0001178;3.90e-17;6!UBERON:0007846;1.13e-15;3!UBERON:0000043;1.13e-15;3!UBERON:0007845;1.13e-15;3!UBERON:0004797;3.45e-12;4!UBERON:0000415;3.45e-12;4!UBERON:0007240;3.45e-12;4!UBERON:0005742;3.45e-12;4!UBERON:0005734;3.45e-12;4!UBERON:0004664;3.45e-12;4!UBERON:0004663;3.45e-12;4!UBERON:0004457;1.26e-11;9!UBERON:0000042;1.26e-11;9!UBERON:0000078;8.05e-07;2!UBERON:0002012;8.05e-07;2!UBERON:0005406;8.05e-07;2!UBERON:0005396;8.05e-07;2!UBERON:0008886;8.05e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.01e-17,6;UBERON:0002358,2.01e-17,6;UBERON:0003684,2.01e-17,6;UBERON:0001178,2.01e-17,6;UBERON:0007846,1.53e-15,3;UBERON:0000043,1.53e-15,3;UBERON:0007845,1.53e-15,3;UBERON:0000415,4.83e-12,4;UBERON:0007240,4.83e-12,4;UBERON:0005742,4.83e-12,4;UBERON:0005734,4.83e-12,4;UBERON:0004664,4.83e-12,4;UBERON:0004663,4.83e-12,4;UBERON:0004457,5.38e-09,12;UBERON:0000042,5.38e-09,12;UBERON:0004797,2.95e-07,7;UBERON:0005396,6.80e-07,2;UBERON:0005406,7.61e-07,2;UBERON:0000078,9.02e-07,2;UBERON:0007497,9.02e-07,2;UBERON:0003643,9.02e-07,2;UBERON:0003504,9.02e-07,2;UBERON:0003469,9.02e-07,2;UBERON:0003496,9.02e-07,2;UBERON:0002012,9.02e-07,2;UBERON:0008886,9.02e-07,2;UBERON:0007303,9.02e-07,2;UBERON:0002061,9.02e-07,2;UBERON:0005432,9.02e-07,2;UBERON:0004363,9.02e-07,2|phase1_expression=0,1.92690471501885,1.55049844505568,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.397227542439656,2.58152958673932,0.709336764396714,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.538168907066586,0,1.27159140695737,0.900273288253207,0.412210116953756,0.257640540045629,0.37223371266318,0.843881661206331,0.194874010322397,0.757301322732344,0.644349290496095,0,0.710019185033229,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,7.15312891703765,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,1.12264037773229,1.66580894032411,0,1.76939313257968,1.48418066444991,0,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0.290033387828457,0.170453254832202,0.267096106940212,0.165284915360978,0,0,0,0.929691098594572,3.77774816196768,0,0,0,0,0.37064843820784,0,0,0,0.38126038784765,0,0.42793898803392,0,1.56989728039846,0.359744915166629,0.823611089208164,0,0,0,0,0,0,0,0,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:112357924..112357925,- | |||
|id=chr3:112357924..112357925,- | |||
|ontology_enrichment_celltype=CL:0000057!5.51e-20!75;CL:0000055!8.47e-15!180;CL:0002620!5.95e-13!23;CL:0002334!2.74e-12!12;CL:1000306!7.47e-08!4;CL:0002547!7.47e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.13e-15;3!CL:0002579;1.13e-15;3!CL:0000388;1.13e-15;3!CL:0002334;5.90e-15;12!CL:0002581;2.19e-12;1!CL:0002591;2.19e-12;1!CL:1000306;3.45e-12;4!CL:0002547;3.45e-12;4!CL:0002617;8.05e-07;2!CL:0002596;8.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,5.38e-16,3;CL:0000135,1.53e-15,3;CL:0000388,1.53e-15,3;CL:0002334,4.42e-15,12;CL:0000057,3.22e-13,76;CL:0002581,1.96e-12,1;CL:0002591,2.75e-12,1;CL:1000306,4.83e-12,4;CL:0002547,4.83e-12,4;CL:0002617,5.41e-07,2;CL:0002596,6.80e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!7.47e-08!4;UBERON:0007240!7.47e-08!4;UBERON:0005742!7.47e-08!4;UBERON:0005734!7.47e-08!4;UBERON:0004664!7.47e-08!4;UBERON:0004663!7.47e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.90e-17;6!UBERON:0002358;3.90e-17;6!UBERON:0003684;3.90e-17;6!UBERON:0001178;3.90e-17;6!UBERON:0007846;1.13e-15;3!UBERON:0000043;1.13e-15;3!UBERON:0007845;1.13e-15;3!UBERON:0004797;3.45e-12;4!UBERON:0000415;3.45e-12;4!UBERON:0007240;3.45e-12;4!UBERON:0005742;3.45e-12;4!UBERON:0005734;3.45e-12;4!UBERON:0004664;3.45e-12;4!UBERON:0004663;3.45e-12;4!UBERON:0004457;1.26e-11;9!UBERON:0000042;1.26e-11;9!UBERON:0000078;8.05e-07;2!UBERON:0002012;8.05e-07;2!UBERON:0005406;8.05e-07;2!UBERON:0005396;8.05e-07;2!UBERON:0008886;8.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.01e-17,6;UBERON:0002358,2.01e-17,6;UBERON:0003684,2.01e-17,6;UBERON:0001178,2.01e-17,6;UBERON:0007846,1.53e-15,3;UBERON:0000043,1.53e-15,3;UBERON:0007845,1.53e-15,3;UBERON:0000415,4.83e-12,4;UBERON:0007240,4.83e-12,4;UBERON:0005742,4.83e-12,4;UBERON:0005734,4.83e-12,4;UBERON:0004664,4.83e-12,4;UBERON:0004663,4.83e-12,4;UBERON:0004457,5.38e-09,12;UBERON:0000042,5.38e-09,12;UBERON:0004797,2.95e-07,7;UBERON:0005396,6.80e-07,2;UBERON:0005406,7.61e-07,2;UBERON:0000078,9.02e-07,2;UBERON:0007497,9.02e-07,2;UBERON:0003643,9.02e-07,2;UBERON:0003504,9.02e-07,2;UBERON:0003469,9.02e-07,2;UBERON:0003496,9.02e-07,2;UBERON:0002012,9.02e-07,2;UBERON:0008886,9.02e-07,2;UBERON:0007303,9.02e-07,2;UBERON:0002061,9.02e-07,2;UBERON:0005432,9.02e-07,2;UBERON:0004363,9.02e-07,2 | |||
|phase1_expression=0,1.92690471501885,1.55049844505568,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.397227542439656,2.58152958673932,0.709336764396714,1.68203280042692,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.538168907066586,0,1.27159140695737,0.900273288253207,0.412210116953756,0.257640540045629,0.37223371266318,0.843881661206331,0.194874010322397,0.757301322732344,0.644349290496095,0,0.710019185033229,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,7.15312891703765,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,1.12264037773229,1.66580894032411,0,1.76939313257968,1.48418066444991,0,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0.290033387828457,0.170453254832202,0.267096106940212,0.165284915360978,0,0,0,0.929691098594572,3.77774816196768,0,0,0,0,0.37064843820784,0,0,0,0.38126038784765,0,0.42793898803392,0,1.56989728039846,0.359744915166629,0.823611089208164,0,0,0,0,0,0,0,0,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,1.0062716070103,0,0,0.453692771289717,0.15543720058278,0,0,0,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0,0,0,0.928067519756987,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0.537266523244462,0,0.657852148736121,0.353378291891762,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,1.11598505450025,1.38652688589425,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0.684466602170562,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:112357924..112357925,- | |||
}} |
Revision as of 20:47, 12 September 2013
Short description: | p@chr3:112357924..112357925, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:112357924..112357925, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 5.38e-16 | 3 |
fibrocyte | 1.53e-15 | 3 |
tendon cell | 1.53e-15 | 3 |
preadipocyte | 4.42e-15 | 12 |
fibroblast | 3.22e-13 | 76 |
perirenal preadipocyte | 1.96e-12 | 1 |
smooth muscle cell of the pulmonary artery | 2.75e-12 | 1 |
fibroblast of tunica adventitia of artery | 4.83e-12 | 4 |
fibroblast of the aortic adventitia | 4.83e-12 | 4 |
adipocyte of breast | 5.41e-07 | 2 |
smooth muscle cell of the carotid artery | 6.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.01e-17 | 6 |
peritoneum | 2.01e-17 | 6 |
abdominal cavity | 2.01e-17 | 6 |
visceral peritoneum | 2.01e-17 | 6 |
dense regular connective tissue | 1.53e-15 | 3 |
tendon | 1.53e-15 | 3 |
regular connective tissue | 1.53e-15 | 3 |
artery wall | 4.83e-12 | 4 |
tunica adventitia of artery | 4.83e-12 | 4 |
adventitia | 4.83e-12 | 4 |
tunica adventitia of blood vessel | 4.83e-12 | 4 |
aorta tunica adventitia | 4.83e-12 | 4 |
aorta wall | 4.83e-12 | 4 |
cavity lining | 5.38e-09 | 12 |
serous membrane | 5.38e-09 | 12 |
blood vessel layer | 2.95e-07 | 7 |
carotid artery segment | 6.80e-07 | 2 |
perirenal fat | 7.61e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 9.02e-07 | 2 |
developing epithelial placode | 9.02e-07 | 2 |
respiratory system arterial blood vessel | 9.02e-07 | 2 |
respiratory system blood vessel | 9.02e-07 | 2 |
respiratory system artery | 9.02e-07 | 2 |
head blood vessel | 9.02e-07 | 2 |
pulmonary artery | 9.02e-07 | 2 |
pulmonary vascular system | 9.02e-07 | 2 |
pharyngeal vasculature | 9.02e-07 | 2 |
truncus arteriosus | 9.02e-07 | 2 |
aortic sac | 9.02e-07 | 2 |
pharyngeal arch artery | 9.02e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.