FFCP PHASE1:Mm9::chr11:84642455..84642468,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=192970|HGNC=|UniProt=Q3U0B3|association_with_transcript=0bp_to_ENSMUST00000047560_5end|description=CAGE_peak_2_at_Dhrs11_5end|id=chr11:84642455..84642468,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!4.46e-11!47;UBERON:0000344!2.51e-09!15;UBERON:0009854!6.38e-09!23;UBERON:0009856!6.38e-09!23;UBERON:0004923!8.73e-09!24;UBERON:0002107!1.50e-08!22;UBERON:0007499!1.50e-08!22;UBERON:0006925!1.50e-08!22;UBERON:0009497!1.50e-08!22;UBERON:0000015!1.50e-08!22;UBERON:0002423!1.50e-08!22;UBERON:0006235!1.50e-08!22;UBERON:0008835!1.50e-08!22;UBERON:0003894!1.50e-08!22;UBERON:0004161!1.50e-08!22;UBERON:0008836!1.50e-08!22;UBERON:0001242!3.87e-08!13;UBERON:0000060!3.87e-08!13;UBERON:0001262!3.87e-08!13;UBERON:0004786!3.87e-08!13;UBERON:0005409!7.55e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.10e-13,31;UBERON:0005409,3.37e-12,47;UBERON:0003914,2.80e-11,47;UBERON:0000344,2.34e-10,15;UBERON:0009854,6.73e-10,23;UBERON:0009856,6.73e-10,23;UBERON:0004923,6.92e-10,24;UBERON:0002107,1.78e-09,22;UBERON:0007499,1.78e-09,22;UBERON:0006925,1.78e-09,22;UBERON:0009497,1.78e-09,22;UBERON:0000015,1.78e-09,22;UBERON:0002423,1.78e-09,22;UBERON:0006235,1.78e-09,22;UBERON:0008835,1.78e-09,22;UBERON:0003894,1.78e-09,22;UBERON:0004161,1.78e-09,22;UBERON:0008836,1.78e-09,22;UBERON:0001242,5.18e-09,13;UBERON:0001262,5.18e-09,13;UBERON:0004786,5.18e-09,13;UBERON:0005172,1.87e-07,49;UBERON:0005173,1.87e-07,49;UBERON:0002417,1.87e-07,49;UBERON:0000916,1.87e-07,49;UBERON:0002365,3.08e-07,25;UBERON:0002330,3.08e-07,25|phase1_expression=0.480446541314382,85.1499994640041,82.354862329506,122.498005579266,127.227515406372,25.3497700586954,16.5864974822823,0.129123323441576,0.281577444303333,0.70219357896598,0.171217968225505,0,0,0,13.3243904726265,17.0079224607454,28.682037003254,0.315462165358238,0,0.84877930359606,1.10556277196391,1.78723712161594,0.522399578277871,25.7587800697385,26.8408858848589,57.423196411502,57.2913454891569,41.5859479083766,46.1756909278989,46.8776041353471,19.2905544270115,3.81018404075779,5.53558308826113,0,2.3108129580102,7.97926297720763,5.51257261908397,2.09265815368454,3.1253413780952,2.61761871986899,0.588231488031014,0,1.45653105909346,1.1330713617802,1.11514624341466,0.734187008646726,3.12956537739216,0.872100625521786,3.95435128922049,4.86074747685709,1.25987779462826,2.87505128729943,0.335565212115473,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,1.54701627683233,0,0.528990979272033,0,1.0165335962074,0,0.449949858640699,0,0,1.19840044207362,6.91592949578798,0,0,0,1.14260393761521,0.662605622854841,0,0,0,1.10115880999389,0.638436690425939,0.307213066512487,0,0.182975287204819,0,1.11673199600552,1.12552522006336,0.30559649555362,0.589257170947335,0.569486723196412,0,0.227178579999552,0.151143120213571,1.73918693221007,12.9063581547208,3.39985666853875,8.63525106620507,7.79731700937203,10.3046184032387,9.40977614882737,0.511290967734173,0.519572009205738,0.70667914902068,0.422530259330042,0,0,0,0,0,0,8.90634261808668,0.517875767294343,2.22663208597237,1.56136794089522,1.52232739156071,5.07354093963329,3.01445281105245,3.05730638552832,3.39299796590124,0,3.90418263683761,9.73071607144862,3.72063754879041,15.6797478106879,12.1218813283806,9.31958806090611,0.878342391034642,1.46612694769419,27.8448190177365,2.99537811264801,3.59941638596045,2.03312363316904,0.748953197024114,0.457500602818626,0.251308704225729,0.347648640384553,1.02286182932132,0.62336413367868,0.811206315338788,0.203678727700633,7.46441823660558,0.252722758433675,1.47309299120532,0.130120442962704,0,0.360124259610698,0.150704817835715,0.0680364991513279,0,0.281105173679186,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.796137067273973,2.80885274925294,3.60287069960601,1.42081749697796,0.621377317606506,1.17263029990548,1.2604344302271,3.07768156260773,5.1158700254325,8.17615698303105,13.7195027402741,13.1453966685813,15.179494507732,23.6966183875412,26.7592966448925,43.5339507261245,45.4681960892784,36.4453191383144,48.7169300100149,1.47202963994889,0.308713837137853,40.6415103070072,22.4782981664013,0.213288250535234,0.232236671860439,1.41754207454303,5.84882221407693,8.67274370994994,9.70150693174052,25.1500402618591,7.90554982675252,6.28338022000674,3.78017296878187,4.09424582950152,16.178749355776,15.3458015411033,24.8926591567959,0,0.456994050438915,0,0.610953983535943,0,0.420814919341911,0.948548056863859,1.77132177575523,2.19798218977925,4.81248939295022,10.0793893209631,10.1775514486817,12.3832166921318,9.44420872016386,13.3887680116412,16.8824011826692,19.8608164389507,10.64475708568,5.67473293712624,6.58947391651396,2.87536413054709,4.46569137202204,3.12037673114561,8.5876818502018,9.14926808961752,17.3679667690812,0.739012760666419,1.13694847062291,0.162964976442026,0.678980343100753,0.234690248288502,1.005037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| ||
|EntrezGene=192970 | |||
|HGNC= | |||
|UniProt=Q3U0B3 | |||
|association_with_transcript=0bp_to_ENSMUST00000047560_5end | |||
|description=CAGE_peak_2_at_Dhrs11_5end | |||
|id=chr11:84642455..84642468,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.46e-11!47;UBERON:0000344!2.51e-09!15;UBERON:0009854!6.38e-09!23;UBERON:0009856!6.38e-09!23;UBERON:0004923!8.73e-09!24;UBERON:0002107!1.50e-08!22;UBERON:0007499!1.50e-08!22;UBERON:0006925!1.50e-08!22;UBERON:0009497!1.50e-08!22;UBERON:0000015!1.50e-08!22;UBERON:0002423!1.50e-08!22;UBERON:0006235!1.50e-08!22;UBERON:0008835!1.50e-08!22;UBERON:0003894!1.50e-08!22;UBERON:0004161!1.50e-08!22;UBERON:0008836!1.50e-08!22;UBERON:0001242!3.87e-08!13;UBERON:0000060!3.87e-08!13;UBERON:0001262!3.87e-08!13;UBERON:0004786!3.87e-08!13;UBERON:0005409!7.55e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.10e-13,31;UBERON:0005409,3.37e-12,47;UBERON:0003914,2.80e-11,47;UBERON:0000344,2.34e-10,15;UBERON:0009854,6.73e-10,23;UBERON:0009856,6.73e-10,23;UBERON:0004923,6.92e-10,24;UBERON:0002107,1.78e-09,22;UBERON:0007499,1.78e-09,22;UBERON:0006925,1.78e-09,22;UBERON:0009497,1.78e-09,22;UBERON:0000015,1.78e-09,22;UBERON:0002423,1.78e-09,22;UBERON:0006235,1.78e-09,22;UBERON:0008835,1.78e-09,22;UBERON:0003894,1.78e-09,22;UBERON:0004161,1.78e-09,22;UBERON:0008836,1.78e-09,22;UBERON:0001242,5.18e-09,13;UBERON:0001262,5.18e-09,13;UBERON:0004786,5.18e-09,13;UBERON:0005172,1.87e-07,49;UBERON:0005173,1.87e-07,49;UBERON:0002417,1.87e-07,49;UBERON:0000916,1.87e-07,49;UBERON:0002365,3.08e-07,25;UBERON:0002330,3.08e-07,25 | |||
|phase1_expression=0.480446541314382,85.1499994640041,82.354862329506,122.498005579266,127.227515406372,25.3497700586954,16.5864974822823,0.129123323441576,0.281577444303333,0.70219357896598,0.171217968225505,0,0,0,13.3243904726265,17.0079224607454,28.682037003254,0.315462165358238,0,0.84877930359606,1.10556277196391,1.78723712161594,0.522399578277871,25.7587800697385,26.8408858848589,57.423196411502,57.2913454891569,41.5859479083766,46.1756909278989,46.8776041353471,19.2905544270115,3.81018404075779,5.53558308826113,0,2.3108129580102,7.97926297720763,5.51257261908397,2.09265815368454,3.1253413780952,2.61761871986899,0.588231488031014,0,1.45653105909346,1.1330713617802,1.11514624341466,0.734187008646726,3.12956537739216,0.872100625521786,3.95435128922049,4.86074747685709,1.25987779462826,2.87505128729943,0.335565212115473,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,1.54701627683233,0,0.528990979272033,0,1.0165335962074,0,0.449949858640699,0,0,1.19840044207362,6.91592949578798,0,0,0,1.14260393761521,0.662605622854841,0,0,0,1.10115880999389,0.638436690425939,0.307213066512487,0,0.182975287204819,0,1.11673199600552,1.12552522006336,0.30559649555362,0.589257170947335,0.569486723196412,0,0.227178579999552,0.151143120213571,1.73918693221007,12.9063581547208,3.39985666853875,8.63525106620507,7.79731700937203,10.3046184032387,9.40977614882737,0.511290967734173,0.519572009205738,0.70667914902068,0.422530259330042,0,0,0,0,0,0,8.90634261808668,0.517875767294343,2.22663208597237,1.56136794089522,1.52232739156071,5.07354093963329,3.01445281105245,3.05730638552832,3.39299796590124,0,3.90418263683761,9.73071607144862,3.72063754879041,15.6797478106879,12.1218813283806,9.31958806090611,0.878342391034642,1.46612694769419,27.8448190177365,2.99537811264801,3.59941638596045,2.03312363316904,0.748953197024114,0.457500602818626,0.251308704225729,0.347648640384553,1.02286182932132,0.62336413367868,0.811206315338788,0.203678727700633,7.46441823660558,0.252722758433675,1.47309299120532,0.130120442962704,0,0.360124259610698,0.150704817835715,0.0680364991513279,0,0.281105173679186,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.796137067273973,2.80885274925294,3.60287069960601,1.42081749697796,0.621377317606506,1.17263029990548,1.2604344302271,3.07768156260773,5.1158700254325,8.17615698303105,13.7195027402741,13.1453966685813,15.179494507732,23.6966183875412,26.7592966448925,43.5339507261245,45.4681960892784,36.4453191383144,48.7169300100149,1.47202963994889,0.308713837137853,40.6415103070072,22.4782981664013,0.213288250535234,0.232236671860439,1.41754207454303,5.84882221407693,8.67274370994994,9.70150693174052,25.1500402618591,7.90554982675252,6.28338022000674,3.78017296878187,4.09424582950152,16.178749355776,15.3458015411033,24.8926591567959,0,0.456994050438915,0,0.610953983535943,0,0.420814919341911,0.948548056863859,1.77132177575523,2.19798218977925,4.81248939295022,10.0793893209631,10.1775514486817,12.3832166921318,9.44420872016386,13.3887680116412,16.8824011826692,19.8608164389507,10.64475708568,5.67473293712624,6.58947391651396,2.87536413054709,4.46569137202204,3.12037673114561,8.5876818502018,9.14926808961752,17.3679667690812,0.739012760666419,1.13694847062291,0.162964976442026,0.678980343100753,0.234690248288502,1.00503754465089,0.952174563544055,0.390267295715598,0.157635144106191,0.221464689648775,0.637819074629948,2.13022309130459,1.38147985492716,1.88043776155965,0,0,0,0,1.60550589987792,1.05490517932983,0.491804836130026,11.3611917241968,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.425820255624806,1.06839362200353,1.14020871547503,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,2.58428293168221,0,0.712994756769443,0,0,3.09406629744561,0,0,0.129358683782755,0.643011105094777,0.177340233642274,0.356737635204141,0.493647061806363,0,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,16.0314460146418,1.66882771809459,15.7201210334024,2.06386867963222,4.8150577116125,23.9227940395958,17.2234726928492,18.9885883761414,9.00885678967433,10.0765045673034,7.87739850685216,1.90934123603023,0,1.01659733563424,0.432021363287205,0,0.218362563746178,0.539457385539283,0.909188012978695,3.92633912976044,7.51766845092399,0.621339313086926,0.56369293868419,0.897099276263873,2.15096037594227,1.36115831840833,0.645799117388655,0.675824501963113,2.46450201156083,2.3436789271911,6.18670132111694,0.724752362478018,1.72818003754719,0.632022241256357,0,0.102710957164827,0.389762468933385,0,0,0.600977247599844,0.886137163047463,0.605798699688886,0.304827226619999,0.100826185136841,0.194915761479505,0.384847366561318,0,14.5107445513735,0,0,0,0,0.563047426353546,0.183151624267265,0.214368379079066,0,0,0,1.14579102687879,0,0,0,0,0.900642406448441,0,0.51776031175182,0.103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| |||
|short_description=p2@Dhrs11 | |||
}} |
Revision as of 21:15, 12 September 2013
Short description: | p2@Dhrs11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dhrs11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000047560_5end |
EntrezGene: | Dhrs11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.10e-13 | 31 |
gastrointestinal system | 3.37e-12 | 47 |
epithelial tube | 2.80e-11 | 47 |
mucosa | 2.34e-10 | 15 |
digestive tract diverticulum | 6.73e-10 | 23 |
sac | 6.73e-10 | 23 |
organ component layer | 6.92e-10 | 24 |
liver | 1.78e-09 | 22 |
epithelial sac | 1.78e-09 | 22 |
digestive gland | 1.78e-09 | 22 |
epithelium of foregut-midgut junction | 1.78e-09 | 22 |
anatomical boundary | 1.78e-09 | 22 |
hepatobiliary system | 1.78e-09 | 22 |
foregut-midgut junction | 1.78e-09 | 22 |
hepatic diverticulum | 1.78e-09 | 22 |
liver primordium | 1.78e-09 | 22 |
septum transversum | 1.78e-09 | 22 |
liver bud | 1.78e-09 | 22 |
intestinal mucosa | 5.18e-09 | 13 |
wall of intestine | 5.18e-09 | 13 |
gastrointestinal system mucosa | 5.18e-09 | 13 |
abdomen element | 1.87e-07 | 49 |
abdominal segment element | 1.87e-07 | 49 |
abdominal segment of trunk | 1.87e-07 | 49 |
abdomen | 1.87e-07 | 49 |
exocrine gland | 3.08e-07 | 25 |
exocrine system | 3.08e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.