FFCP PHASE1:Hg19::chr3:125997081..125997085,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C693 | |||
|description=CAGE_peak_at_chr3:125997081..125997085,+ | |||
|id=chr3:125997081..125997085,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.76e-18;3!UBERON:0006241;1.03e-17;3!UBERON:0003057;1.03e-17;3!UBERON:0006601;8.07e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;3.96e-66;3!UBERON:0005290;3.96e-66;3!UBERON:0004733;9.17e-38;12!UBERON:0002028;9.17e-38;12!UBERON:0004732;5.97e-35;13!UBERON:0002298;9.08e-34;6!UBERON:0002240;1.03e-17;3!UBERON:0005174;1.03e-17;3!UBERON:0001137;1.03e-17;3!UBERON:0002037;1.22e-09;6!UBERON:0001017;9.27e-08;75!UBERON:0000073;2.59e-07;53!UBERON:0002616;2.59e-07;53!UBERON:0002680;7.48e-07;9!UBERON:0001895;7.48e-07;9 | |||
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|short_description=p@chr3:125997081..125997085,+ | |||
}} |
Revision as of 21:19, 12 September 2013
Short description: | p@chr3:125997081..125997085, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:125997081..125997085, + |
Coexpression cluster: | C693_cerebellum_medulla_spinal_locus_Hepatocyte_pons_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.35e-66 | 3 |
myelencephalon | 3.35e-66 | 3 |
future myelencephalon | 3.35e-66 | 3 |
posterior neural tube | 4.60e-53 | 15 |
chordal neural plate | 4.60e-53 | 15 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
brainstem | 8.35e-34 | 6 |
spinal cord | 1.12e-17 | 3 |
dorsal region element | 1.12e-17 | 3 |
dorsum | 1.12e-17 | 3 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
cerebellum | 1.22e-09 | 6 |
rhombic lip | 1.22e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
ecto-epithelium | 2.22e-08 | 104 |
adult organism | 8.86e-08 | 114 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |
regional part of metencephalon | 7.48e-07 | 9 |
metencephalon | 7.48e-07 | 9 |
future metencephalon | 7.48e-07 | 9 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.