FFCP PHASE1:Hg19::chr3:128205876..128205904,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2624|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4171|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AB463675,DQ892141,DQ895335_5end|coexpression_cluster_id=C12|description=CAGE_peak_4_at_GATA2_5end|id=chr3:128205876..128205904,-|ontology_enrichment_celltype=CL:0002274!1.42e-09!5;CL:0000457!1.42e-09!5;CL:0002191!1.42e-09!5;CL:0000097!1.42e-09!5;CL:0000831!1.42e-09!5;CL:0002028!1.42e-09!5|ontology_enrichment_celltype_v019=CL:0000097;1.85e-56;5!CL:0000163;2.00e-31;9!CL:0000039;2.37e-07;7!CL:0000586;2.37e-07;7!CL:0000151;2.75e-07;36|ontology_enrichment_celltype_v019_2=CL:0000097,1.65e-56,5;CL:0002028,1.65e-56,5;CL:0000163,1.88e-31,9;CL:0000151,8.24e-08,36;CL:0000039,2.37e-07,7;CL:0000586,2.37e-07,7;CL:0000763,3.94e-07,108;CL:0000049,3.94e-07,108|ontology_enrichment_development_v019=UBERON:0005754;1.11e-12;1!UBERON:0007297;5.73e-07;2|ontology_enrichment_disease=DOID:8692!2.02e-07!31|ontology_enrichment_disease_v019=DOID:1799;1.75e-12;1!DOID:10165;1.75e-12;1!DOID:1798;1.75e-12;1!DOID:8552;3.26e-12;1|ontology_enrichment_disease_v019_2=DOID:1799,1.96e-12,1;DOID:10165,1.96e-12,1;DOID:1798,1.96e-12,1;DOID:8552,3.85e-12,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000998;1.11e-12;1!UBERON:0006868;1.11e-12;1!UBERON:0002171;1.75e-12;1!UBERON:0006518;1.75e-12;1!UBERON:0008949;1.75e-12;1!UBERON:0000101;1.75e-12;1!UBERON:0002167;1.75e-12;1|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.11e-12,1;UBERON:0006868,1.11e-12,1;UBERON:0002171,1.75e-12,1;UBERON:0006518,1.75e-12,1;UBERON:0008949,1.75e-12,1;UBERON:0000101,1.75e-12,1;UBERON:0002167,1.75e-12,1|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,19.6348007849494,51.832028885193,44.1007057455902,65.7723078151439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.917870904715969,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0,0.66614393599564,0,0,0.146508179271894,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,1.30815439456455,0,3.22789466143284,5.4752163089961,0,0,0.732780747214898,0,0,1.09886179476517,1.16348177330109,0.451191321234361,0.19606253431774,0,0,1.43042921082341,0,0,0,0,0,0.176915129006678,0,0,0.494255755786011,0.104421949505455,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0.640724475406168,0,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4171 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AB463675,DQ892141,DQ895335_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_4_at_GATA2_5end | |||
|id=chr3:128205876..128205904,- | |||
|ontology_enrichment_celltype=CL:0002274!1.42e-09!5;CL:0000457!1.42e-09!5;CL:0002191!1.42e-09!5;CL:0000097!1.42e-09!5;CL:0000831!1.42e-09!5;CL:0002028!1.42e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.85e-56;5!CL:0000163;2.00e-31;9!CL:0000039;2.37e-07;7!CL:0000586;2.37e-07;7!CL:0000151;2.75e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.65e-56,5;CL:0002028,1.65e-56,5;CL:0000163,1.88e-31,9;CL:0000151,8.24e-08,36;CL:0000039,2.37e-07,7;CL:0000586,2.37e-07,7;CL:0000763,3.94e-07,108;CL:0000049,3.94e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.11e-12;1!UBERON:0007297;5.73e-07;2 | |||
|ontology_enrichment_disease=DOID:8692!2.02e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.75e-12;1!DOID:10165;1.75e-12;1!DOID:1798;1.75e-12;1!DOID:8552;3.26e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.96e-12,1;DOID:10165,1.96e-12,1;DOID:1798,1.96e-12,1;DOID:8552,3.85e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.11e-12;1!UBERON:0006868;1.11e-12;1!UBERON:0002171;1.75e-12;1!UBERON:0006518;1.75e-12;1!UBERON:0008949;1.75e-12;1!UBERON:0000101;1.75e-12;1!UBERON:0002167;1.75e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.11e-12,1;UBERON:0006868,1.11e-12,1;UBERON:0002171,1.75e-12,1;UBERON:0006518,1.75e-12,1;UBERON:0008949,1.75e-12,1;UBERON:0000101,1.75e-12,1;UBERON:0002167,1.75e-12,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,19.6348007849494,51.832028885193,44.1007057455902,65.7723078151439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.917870904715969,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0,0.66614393599564,0,0,0.146508179271894,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,1.30815439456455,0,3.22789466143284,5.4752163089961,0,0,0.732780747214898,0,0,1.09886179476517,1.16348177330109,0.451191321234361,0.19606253431774,0,0,1.43042921082341,0,0,0,0,0,0.176915129006678,0,0,0.494255755786011,0.104421949505455,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0.640724475406168,0,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.327628914576042,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0.82046545696302,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,2.88097363929565,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.709618961301111,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,9.31451510420044,0.22910686854405,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0.227336094654718,0,0,0,0.426467963801962,0,0,0,0,0.12729431655633,0,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p4@GATA2 | |||
}} |
Revision as of 21:24, 12 September 2013
Short description: | p4@GATA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GATA2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_AB463675, DQ892141, DQ895335_5end |
EntrezGene: | GATA2 |
HGNC: | 4171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.65e-56 | 5 |
basophil mast progenitor cell | 1.65e-56 | 5 |
endocrine cell | 1.88e-31 | 9 |
secretory cell | 8.24e-08 | 36 |
germ line cell | 2.37e-07 | 7 |
germ cell | 2.37e-07 | 7 |
myeloid cell | 3.94e-07 | 108 |
common myeloid progenitor | 3.94e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.11e-12 | 1 |
seminal fluid secreting gland | 1.11e-12 | 1 |
lower lobe of right lung | 1.75e-12 | 1 |
right lung lobe | 1.75e-12 | 1 |
lower lobe of lung | 1.75e-12 | 1 |
lobe of lung | 1.75e-12 | 1 |
right lung | 1.75e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.96e-12 | 1 |
endocrine pancreas cancer | 1.96e-12 | 1 |
pancreatic endocrine carcinoma | 1.96e-12 | 1 |
chronic myeloid leukemia | 3.85e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.