FFCP PHASE1:Hg19::chr3:142607967..142607978,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26577|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8739|TSSclassifier=S|UniProt=|association_with_transcript=-33bp_to_uc003evd.2_5end|coexpression_cluster_id=C29|description=CAGE_peak_6_at_PCOLCE2_5end|id=chr3:142607967..142607978,-|ontology_enrichment_celltype=CL:0000136!6.92e-15!15;CL:0000055!3.78e-13!180;CL:0000325!2.80e-07!39;CL:0000153!6.03e-07!9;CL:0000447!6.03e-07!9|ontology_enrichment_celltype_v019=CL:0000136;1.13e-27;13!CL:0000153;4.94e-12;9!CL:0000447;4.94e-12;9!CL:0000138;1.21e-09;6!CL:0000135;2.69e-08;3!CL:0000388;2.69e-08;3!CL:0000359;6.78e-08;32!CL:0002334;1.83e-07;12!CL:0002615;2.10e-07;3!CL:0002521;4.11e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,8.59e-32,15;CL:0000153,7.44e-12,9;CL:0000447,7.44e-12,9;CL:0000058,1.87e-09,6;CL:0000138,1.87e-09,6;CL:0000135,2.71e-08,3;CL:0000388,2.71e-08,3;CL:0000359,4.48e-08,32;CL:0002334,1.28e-07,12;CL:0002615,2.81e-07,3;CL:0002521,4.04e-07,3;CL:0002595,9.08e-07,5;CL:0002580,9.16e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001013!2.98e-08!14;UBERON:0001637!5.76e-08!42;UBERON:0003509!5.76e-08!42;UBERON:0004572!5.76e-08!42;UBERON:0004573!1.70e-07!33;UBERON:0004571!1.70e-07!33;UBERON:0007100!2.17e-07!27;UBERON:0007023!8.10e-07!115;UBERON:0004872!9.12e-07!84|ontology_enrichment_uberon_v019=UBERON:0001013;7.51e-14;14!UBERON:0004573;7.95e-10;33!UBERON:0004571;7.95e-10;33!UBERON:0001443;1.16e-08;11!UBERON:0004457;1.75e-08;9!UBERON:0000042;1.75e-08;9!UBERON:0007846;2.69e-08;3!UBERON:0000043;2.69e-08;3!UBERON:0007845;2.69e-08;3!UBERON:0007100;3.37e-08;25!UBERON:0003978;3.82e-08;3!UBERON:0000946;3.82e-08;3!UBERON:0001637;1.36e-07;42!UBERON:0003509;1.36e-07;42!UBERON:0004572;1.36e-07;42!UBERON:0004151;1.63e-07;3!UBERON:0000310;2.70e-07;10!UBERON:0002072;3.59e-07;5!UBERON:0002190;4.11e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.81e-14,14;UBERON:0004797,2.34e-11,7;UBERON:0004573,1.28e-10,33;UBERON:0004571,1.28e-10,33;UBERON:0007500,1.68e-10,59;UBERON:0001981,1.68e-10,59;UBERON:0004537,1.68e-10,59;UBERON:0006965,1.68e-10,59;UBERON:0004872,3.13e-10,83;UBERON:0001637,3.67e-10,42;UBERON:0003509,3.67e-10,42;UBERON:0004572,3.67e-10,42;UBERON:0007100,5.12e-09,27;UBERON:0001443,1.05e-08,11;UBERON:0000055,2.05e-08,68;UBERON:0007846,2.71e-08,3;UBERON:0000043,2.71e-08,3;UBERON:0007845,2.71e-08,3;UBERON:0003978,4.11e-08,3;UBERON:0009751,4.11e-08,3;UBERON:0000946,4.11e-08,3;UBERON:0002523,4.11e-08,3;UBERON:0005983,4.11e-08,3;UBERON:0002165,4.11e-08,3;UBERON:0002062,4.11e-08,3;UBERON:0007280,4.11e-08,3;UBERON:0004151,1.82e-07,3;UBERON:0000310,2.68e-07,10;UBERON:0002072,3.35e-07,5;UBERON:0000948,3.73e-07,24;UBERON:0005498,3.73e-07,24;UBERON:0004140,3.73e-07,24;UBERON:0009881,3.73e-07,24;UBERON:0004141,3.73e-07,24;UBERON:0003084,3.73e-07,24;UBERON:0007005,3.73e-07,24;UBERON:0004139,3.73e-07,24;UBERON:0004291,3.73e-07,24;UBERON:0002190,4.04e-07,3;UBERON:0003834,9.08e-07,5;UBERON:0001533,9.08e-07,5|phase1_expression=2.18014055124668,5.1384125733836,5.92008497203079,1.0007329835313,5.81049422755474,2.61701557230111,2.53299878168311,1.26343974685366,4.70134130759709,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,1.00267582127178,3.47631645505977,13.5198610998687,32.117901439974,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77282716330412,0.794455084879313,2.29469296599051,1.77334191099179,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.717558542755448,0.213557388818567,0.211931901159562,2.10063767259082,0,0.772921620136887,0.558350568994769,3.88185564154912,1.65642908774038,0.504867548488229,0,0.484938170456436,0.710019185033229,0.604512589365842,0,0,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.514137463516618,0,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.958499421966331,0,1.42636905040718,5.35690834670043,0.821905290201534,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,1.98486246255021,2.30192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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8739 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_uc003evd.2_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_6_at_PCOLCE2_5end | |||
|id=chr3:142607967..142607978,- | |||
|ontology_enrichment_celltype=CL:0000136!6.92e-15!15;CL:0000055!3.78e-13!180;CL:0000325!2.80e-07!39;CL:0000153!6.03e-07!9;CL:0000447!6.03e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.13e-27;13!CL:0000153;4.94e-12;9!CL:0000447;4.94e-12;9!CL:0000138;1.21e-09;6!CL:0000135;2.69e-08;3!CL:0000388;2.69e-08;3!CL:0000359;6.78e-08;32!CL:0002334;1.83e-07;12!CL:0002615;2.10e-07;3!CL:0002521;4.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.59e-32,15;CL:0000153,7.44e-12,9;CL:0000447,7.44e-12,9;CL:0000058,1.87e-09,6;CL:0000138,1.87e-09,6;CL:0000135,2.71e-08,3;CL:0000388,2.71e-08,3;CL:0000359,4.48e-08,32;CL:0002334,1.28e-07,12;CL:0002615,2.81e-07,3;CL:0002521,4.04e-07,3;CL:0002595,9.08e-07,5;CL:0002580,9.16e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.98e-08!14;UBERON:0001637!5.76e-08!42;UBERON:0003509!5.76e-08!42;UBERON:0004572!5.76e-08!42;UBERON:0004573!1.70e-07!33;UBERON:0004571!1.70e-07!33;UBERON:0007100!2.17e-07!27;UBERON:0007023!8.10e-07!115;UBERON:0004872!9.12e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.51e-14;14!UBERON:0004573;7.95e-10;33!UBERON:0004571;7.95e-10;33!UBERON:0001443;1.16e-08;11!UBERON:0004457;1.75e-08;9!UBERON:0000042;1.75e-08;9!UBERON:0007846;2.69e-08;3!UBERON:0000043;2.69e-08;3!UBERON:0007845;2.69e-08;3!UBERON:0007100;3.37e-08;25!UBERON:0003978;3.82e-08;3!UBERON:0000946;3.82e-08;3!UBERON:0001637;1.36e-07;42!UBERON:0003509;1.36e-07;42!UBERON:0004572;1.36e-07;42!UBERON:0004151;1.63e-07;3!UBERON:0000310;2.70e-07;10!UBERON:0002072;3.59e-07;5!UBERON:0002190;4.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.81e-14,14;UBERON:0004797,2.34e-11,7;UBERON:0004573,1.28e-10,33;UBERON:0004571,1.28e-10,33;UBERON:0007500,1.68e-10,59;UBERON:0001981,1.68e-10,59;UBERON:0004537,1.68e-10,59;UBERON:0006965,1.68e-10,59;UBERON:0004872,3.13e-10,83;UBERON:0001637,3.67e-10,42;UBERON:0003509,3.67e-10,42;UBERON:0004572,3.67e-10,42;UBERON:0007100,5.12e-09,27;UBERON:0001443,1.05e-08,11;UBERON:0000055,2.05e-08,68;UBERON:0007846,2.71e-08,3;UBERON:0000043,2.71e-08,3;UBERON:0007845,2.71e-08,3;UBERON:0003978,4.11e-08,3;UBERON:0009751,4.11e-08,3;UBERON:0000946,4.11e-08,3;UBERON:0002523,4.11e-08,3;UBERON:0005983,4.11e-08,3;UBERON:0002165,4.11e-08,3;UBERON:0002062,4.11e-08,3;UBERON:0007280,4.11e-08,3;UBERON:0004151,1.82e-07,3;UBERON:0000310,2.68e-07,10;UBERON:0002072,3.35e-07,5;UBERON:0000948,3.73e-07,24;UBERON:0005498,3.73e-07,24;UBERON:0004140,3.73e-07,24;UBERON:0009881,3.73e-07,24;UBERON:0004141,3.73e-07,24;UBERON:0003084,3.73e-07,24;UBERON:0007005,3.73e-07,24;UBERON:0004139,3.73e-07,24;UBERON:0004291,3.73e-07,24;UBERON:0002190,4.04e-07,3;UBERON:0003834,9.08e-07,5;UBERON:0001533,9.08e-07,5 | |||
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| |||
|short_description=p6@PCOLCE2 | |||
}} |
Revision as of 21:53, 12 September 2013
Short description: | p6@PCOLCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PCOLCE2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -33bp_to_uc003evd.2_5end |
EntrezGene: | PCOLCE2 |
HGNC: | 8739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.59e-32 | 15 |
GAG secreting cell | 7.44e-12 | 9 |
carbohydrate secreting cell | 7.44e-12 | 9 |
chondroblast | 1.87e-09 | 6 |
chondrocyte | 1.87e-09 | 6 |
fibrocyte | 2.71e-08 | 3 |
tendon cell | 2.71e-08 | 3 |
vascular associated smooth muscle cell | 4.48e-08 | 32 |
preadipocyte | 1.28e-07 | 12 |
adipocyte of omentum tissue | 2.81e-07 | 3 |
subcutaneous fat cell | 4.04e-07 | 3 |
smooth muscle cell of the subclavian artery | 9.08e-07 | 5 |
preadipocyte of the breast | 9.16e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.