FFCP PHASE1:Mm9::chr12:113219329..113219340,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217874|HGNC=|MCL_coexpression_id=16|UniProt=B2RV38|association_with_transcript=0bp_to_uc007peg.2_5end|description=CAGE_peak_3_at_BC048943_5end|id=chr12:113219329..113219340,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!2.93e-16!9;UBERON:0000019!2.93e-16!9;UBERON:0000047!2.93e-16!9;UBERON:0004088!2.93e-16!9;UBERON:0002104!2.93e-16!9;UBERON:0001456!2.93e-16!9;UBERON:0003072!2.93e-16!9;UBERON:0003071!2.93e-16!9;UBERON:0004128!2.93e-16!9;UBERON:0001444!4.15e-13!11;UBERON:0000020!6.30e-12!12;UBERON:0001032!6.30e-12!12;UBERON:0004456!6.30e-12!12;UBERON:0005085!6.31e-11!13;UBERON:0000033!5.07e-10!63;UBERON:0002298!1.07e-07!6;UBERON:0002950!4.12e-07!4;UBERON:0001891!4.12e-07!4;UBERON:0009616!4.12e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.69e-35,9;UBERON:0000019,3.69e-35,9;UBERON:0000047,3.69e-35,9;UBERON:0010312,3.69e-35,9;UBERON:0004088,3.69e-35,9;UBERON:0002104,3.69e-35,9;UBERON:0001456,3.69e-35,9;UBERON:0003072,3.69e-35,9;UBERON:0004128,3.69e-35,9;UBERON:0003071,3.69e-35,9;UBERON:0001444,7.21e-29,11;UBERON:0000020,1.66e-26,12;UBERON:0001032,1.66e-26,12;UBERON:0004456,1.66e-26,12;UBERON:0000033,1.66e-24,13;UBERON:0005085,1.66e-24,13;UBERON:0007811,4.44e-09,36;UBERON:0000153,1.22e-07,43;UBERON:0002346,3.03e-07,64;UBERON:0003075,3.03e-07,64;UBERON:0007284,3.03e-07,64;UBERON:0003056,9.97e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,1.46390398505774,0.83778682725382,0,0,0,0,0.898743836428936,0,0,0,0,0.41557608911912,0,0,0,0,5.26104639716185,0,0.229902104433473,0,0.753524089178575,2.9255694635071,6.66191345481219,4.68508622798644,17.074422468775,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.590292695242212,0,0.465067889500816,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p3@BC048943}} | ||
|EntrezGene=217874 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|UniProt=B2RV38 | |||
|association_with_transcript=0bp_to_uc007peg.2_5end | |||
|description=CAGE_peak_3_at_BC048943_5end | |||
|id=chr12:113219329..113219340,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.93e-16!9;UBERON:0000019!2.93e-16!9;UBERON:0000047!2.93e-16!9;UBERON:0004088!2.93e-16!9;UBERON:0002104!2.93e-16!9;UBERON:0001456!2.93e-16!9;UBERON:0003072!2.93e-16!9;UBERON:0003071!2.93e-16!9;UBERON:0004128!2.93e-16!9;UBERON:0001444!4.15e-13!11;UBERON:0000020!6.30e-12!12;UBERON:0001032!6.30e-12!12;UBERON:0004456!6.30e-12!12;UBERON:0005085!6.31e-11!13;UBERON:0000033!5.07e-10!63;UBERON:0002298!1.07e-07!6;UBERON:0002950!4.12e-07!4;UBERON:0001891!4.12e-07!4;UBERON:0009616!4.12e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.69e-35,9;UBERON:0000019,3.69e-35,9;UBERON:0000047,3.69e-35,9;UBERON:0010312,3.69e-35,9;UBERON:0004088,3.69e-35,9;UBERON:0002104,3.69e-35,9;UBERON:0001456,3.69e-35,9;UBERON:0003072,3.69e-35,9;UBERON:0004128,3.69e-35,9;UBERON:0003071,3.69e-35,9;UBERON:0001444,7.21e-29,11;UBERON:0000020,1.66e-26,12;UBERON:0001032,1.66e-26,12;UBERON:0004456,1.66e-26,12;UBERON:0000033,1.66e-24,13;UBERON:0005085,1.66e-24,13;UBERON:0007811,4.44e-09,36;UBERON:0000153,1.22e-07,43;UBERON:0002346,3.03e-07,64;UBERON:0003075,3.03e-07,64;UBERON:0007284,3.03e-07,64;UBERON:0003056,9.97e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,1.46390398505774,0.83778682725382,0,0,0,0,0.898743836428936,0,0,0,0,0.41557608911912,0,0,0,0,5.26104639716185,0,0.229902104433473,0,0.753524089178575,2.9255694635071,6.66191345481219,4.68508622798644,17.074422468775,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.590292695242212,0,0.465067889500816,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@BC048943 | |||
}} |
Revision as of 22:21, 12 September 2013
Short description: | p3@BC048943 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BC048943_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_uc007peg.2_5end |
EntrezGene: | BC048943 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.69e-35 | 9 |
camera-type eye | 3.69e-35 | 9 |
simple eye | 3.69e-35 | 9 |
immature eye | 3.69e-35 | 9 |
ocular region | 3.69e-35 | 9 |
visual system | 3.69e-35 | 9 |
face | 3.69e-35 | 9 |
optic cup | 3.69e-35 | 9 |
optic vesicle | 3.69e-35 | 9 |
eye primordium | 3.69e-35 | 9 |
subdivision of head | 7.21e-29 | 11 |
sense organ | 1.66e-26 | 12 |
sensory system | 1.66e-26 | 12 |
entire sense organ system | 1.66e-26 | 12 |
head | 1.66e-24 | 13 |
ectodermal placode | 1.66e-24 | 13 |
craniocervical region | 4.44e-09 | 36 |
anterior region of body | 1.22e-07 | 43 |
neurectoderm | 3.03e-07 | 64 |
neural plate | 3.03e-07 | 64 |
presumptive neural plate | 3.03e-07 | 64 |
pre-chordal neural plate | 9.97e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.