FFCP PHASE1:Mm9::chr13:81772118..81772152,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110789|HGNC=|MCL_coexpression_id=53|UniProt=B8JJE0,D3YYF1,Q8VHN7,Q8BPQ5|association_with_transcript=0bp_to_ENSMUST00000095585,ENSMUST00000126444,ENSMUST00000128585,ENSMUST00000146749,NM_054053,uc007rhn.1,uc007rhs.1,uc007rht.1,uc007rhu.1_5end|description=CAGE_peak_1_at_Gpr98_5end|id=chr13:81772118..81772152,-|ontology_enrichment_celltype=CL:0000117!2.64e-12!23;CL:0000337!2.64e-12!23;CL:0000221!6.61e-10!44;CL:0000133!6.61e-10!44;CL:0002319!2.37e-09!43;CL:0000540!4.36e-08!33;CL:0000047!4.36e-08!33;CL:0000031!4.36e-08!33;CL:0000404!4.36e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-13,23;CL:0000337,1.25e-13,23;CL:0000221,1.02e-12,44;CL:0000133,1.02e-12,44;CL:0002319,6.77e-12,43;CL:0000540,5.60e-09,33;CL:0000047,5.60e-09,33;CL:0000031,5.60e-09,33;CL:0000404,5.60e-09,33;CL:0002609,1.76e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.04e-15!71;UBERON:0003075!1.04e-15!71;UBERON:0007284!1.04e-15!71;UBERON:0000033!9.31e-15!63;UBERON:0003056!4.88e-14!49;UBERON:0004121!6.36e-13!102;UBERON:0000924!6.36e-13!102;UBERON:0006601!6.36e-13!102;UBERON:0001017!4.06e-12!73;UBERON:0005743!4.06e-12!73;UBERON:0000073!3.27e-11!75;UBERON:0001016!3.27e-11!75;UBERON:0001049!3.84e-11!52;UBERON:0005068!3.84e-11!52;UBERON:0006241!3.84e-11!52;UBERON:0007135!3.84e-11!52;UBERON:0002616!1.67e-09!49;UBERON:0000955!5.18e-09!50;UBERON:0006238!5.18e-09!50;UBERON:0000020!1.83e-08!12;UBERON:0001032!1.83e-08!12;UBERON:0004456!1.83e-08!12;UBERON:0000970!2.04e-08!9;UBERON:0000019!2.04e-08!9;UBERON:0000047!2.04e-08!9;UBERON:0004088!2.04e-08!9;UBERON:0002104!2.04e-08!9;UBERON:0001456!2.04e-08!9;UBERON:0003072!2.04e-08!9;UBERON:0003071!2.04e-08!9;UBERON:0004128!2.04e-08!9;UBERON:0003080!3.06e-08!40;UBERON:0002780!5.32e-08!39;UBERON:0001890!5.32e-08!39;UBERON:0006240!5.32e-08!39;UBERON:0005085!2.34e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.52e-20,49;UBERON:0002346,1.56e-19,64;UBERON:0003075,1.56e-19,64;UBERON:0007284,1.56e-19,64;UBERON:0010371,4.71e-18,73;UBERON:0004121,6.72e-18,95;UBERON:0000924,6.72e-18,95;UBERON:0006601,6.72e-18,95;UBERON:0001017,1.45e-13,73;UBERON:0000020,4.95e-13,12;UBERON:0001032,4.95e-13,12;UBERON:0004456,4.95e-13,12;UBERON:0001016,6.96e-13,75;UBERON:0000073,1.84e-12,54;UBERON:0001049,1.87e-12,52;UBERON:0005068,1.87e-12,52;UBERON:0006241,1.87e-12,52;UBERON:0007135,1.87e-12,52;UBERON:0000970,2.14e-12,9;UBERON:0000019,2.14e-12,9;UBERON:0000047,2.14e-12,9;UBERON:0010312,2.14e-12,9;UBERON:0004088,2.14e-12,9;UBERON:0002104,2.14e-12,9;UBERON:0001456,2.14e-12,9;UBERON:0003072,2.14e-12,9;UBERON:0004128,2.14e-12,9;UBERON:0003071,2.14e-12,9;UBERON:0010314,2.62e-12,92;UBERON:0000033,9.84e-12,13;UBERON:0005085,9.84e-12,13;UBERON:0002780,1.45e-11,39;UBERON:0001890,1.45e-11,39;UBERON:0006240,1.45e-11,39;UBERON:0003080,4.37e-11,40;UBERON:0002616,1.45e-10,46;UBERON:0000955,3.60e-10,47;UBERON:0006238,3.60e-10,47;UBERON:0001444,1.33e-09,11;UBERON:0002020,3.84e-09,34;UBERON:0001954,2.97e-07,7;UBERON:0003022,2.97e-07,7;UBERON:0002421,2.97e-07,7;UBERON:0000349,2.97e-07,7;UBERON:0002600,2.97e-07,7;UBERON:0003528,6.02e-07,29;UBERON:0002791,6.02e-07,29;UBERON:0001893,6.02e-07,29;UBERON:0000007,7.71e-07,8;UBERON:0003296,7.71e-07,8;UBERON:0010133,7.71e-07,8|phase1_expression=16.4953312517938,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,3.48840250208714,1.31811709640683,2.72201858703997,1.39986421625363,7.18762821824858,0,0,0,0,0,0,7.08107613008592,2.11596391708813,5.70448263155561,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,2.68952813725088,10.5763404554647,5.40023753326763,7.15104868594699,0.856952953211411,1.98781686856452,11.2691535277758,11.2139201091337,5.51531271966013,1.10115880999389,0.766124028511126,0.614426133024974,9.75958529203434,9.97215315266265,17.1901412283731,0.837548997004143,1.12552522006336,1.22238598221448,2.35702868378934,3.55929201997757,7.45597783301202,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,9.71819596459095,0,0,0,0,0.253359865475099,0,0,0,1.33597925158342,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.879666139307728,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.46612694769419,0,0,0,0,0.898743836428936,0,3.39266750704734,0.347648640384553,0.511430914660661,0.20778804455956,1.1356888414743,0.407357455401265,0,0,22.5172785798527,16.3951758133007,19.5416788768452,27.9096301198291,38.8818430016145,60.9607032395898,55.9856957644794,47.5067743517825,29.2334808935088,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,1.05144974282064,12.4514580978934,0,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.758671603812327,1.71372768914593,0,0.6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| ||
|EntrezGene=110789 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|UniProt=B8JJE0,D3YYF1,Q8VHN7,Q8BPQ5 | |||
|association_with_transcript=0bp_to_ENSMUST00000095585,ENSMUST00000126444,ENSMUST00000128585,ENSMUST00000146749,NM_054053,uc007rhn.1,uc007rhs.1,uc007rht.1,uc007rhu.1_5end | |||
|description=CAGE_peak_1_at_Gpr98_5end | |||
|id=chr13:81772118..81772152,- | |||
|ontology_enrichment_celltype=CL:0000117!2.64e-12!23;CL:0000337!2.64e-12!23;CL:0000221!6.61e-10!44;CL:0000133!6.61e-10!44;CL:0002319!2.37e-09!43;CL:0000540!4.36e-08!33;CL:0000047!4.36e-08!33;CL:0000031!4.36e-08!33;CL:0000404!4.36e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-13,23;CL:0000337,1.25e-13,23;CL:0000221,1.02e-12,44;CL:0000133,1.02e-12,44;CL:0002319,6.77e-12,43;CL:0000540,5.60e-09,33;CL:0000047,5.60e-09,33;CL:0000031,5.60e-09,33;CL:0000404,5.60e-09,33;CL:0002609,1.76e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.04e-15!71;UBERON:0003075!1.04e-15!71;UBERON:0007284!1.04e-15!71;UBERON:0000033!9.31e-15!63;UBERON:0003056!4.88e-14!49;UBERON:0004121!6.36e-13!102;UBERON:0000924!6.36e-13!102;UBERON:0006601!6.36e-13!102;UBERON:0001017!4.06e-12!73;UBERON:0005743!4.06e-12!73;UBERON:0000073!3.27e-11!75;UBERON:0001016!3.27e-11!75;UBERON:0001049!3.84e-11!52;UBERON:0005068!3.84e-11!52;UBERON:0006241!3.84e-11!52;UBERON:0007135!3.84e-11!52;UBERON:0002616!1.67e-09!49;UBERON:0000955!5.18e-09!50;UBERON:0006238!5.18e-09!50;UBERON:0000020!1.83e-08!12;UBERON:0001032!1.83e-08!12;UBERON:0004456!1.83e-08!12;UBERON:0000970!2.04e-08!9;UBERON:0000019!2.04e-08!9;UBERON:0000047!2.04e-08!9;UBERON:0004088!2.04e-08!9;UBERON:0002104!2.04e-08!9;UBERON:0001456!2.04e-08!9;UBERON:0003072!2.04e-08!9;UBERON:0003071!2.04e-08!9;UBERON:0004128!2.04e-08!9;UBERON:0003080!3.06e-08!40;UBERON:0002780!5.32e-08!39;UBERON:0001890!5.32e-08!39;UBERON:0006240!5.32e-08!39;UBERON:0005085!2.34e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.52e-20,49;UBERON:0002346,1.56e-19,64;UBERON:0003075,1.56e-19,64;UBERON:0007284,1.56e-19,64;UBERON:0010371,4.71e-18,73;UBERON:0004121,6.72e-18,95;UBERON:0000924,6.72e-18,95;UBERON:0006601,6.72e-18,95;UBERON:0001017,1.45e-13,73;UBERON:0000020,4.95e-13,12;UBERON:0001032,4.95e-13,12;UBERON:0004456,4.95e-13,12;UBERON:0001016,6.96e-13,75;UBERON:0000073,1.84e-12,54;UBERON:0001049,1.87e-12,52;UBERON:0005068,1.87e-12,52;UBERON:0006241,1.87e-12,52;UBERON:0007135,1.87e-12,52;UBERON:0000970,2.14e-12,9;UBERON:0000019,2.14e-12,9;UBERON:0000047,2.14e-12,9;UBERON:0010312,2.14e-12,9;UBERON:0004088,2.14e-12,9;UBERON:0002104,2.14e-12,9;UBERON:0001456,2.14e-12,9;UBERON:0003072,2.14e-12,9;UBERON:0004128,2.14e-12,9;UBERON:0003071,2.14e-12,9;UBERON:0010314,2.62e-12,92;UBERON:0000033,9.84e-12,13;UBERON:0005085,9.84e-12,13;UBERON:0002780,1.45e-11,39;UBERON:0001890,1.45e-11,39;UBERON:0006240,1.45e-11,39;UBERON:0003080,4.37e-11,40;UBERON:0002616,1.45e-10,46;UBERON:0000955,3.60e-10,47;UBERON:0006238,3.60e-10,47;UBERON:0001444,1.33e-09,11;UBERON:0002020,3.84e-09,34;UBERON:0001954,2.97e-07,7;UBERON:0003022,2.97e-07,7;UBERON:0002421,2.97e-07,7;UBERON:0000349,2.97e-07,7;UBERON:0002600,2.97e-07,7;UBERON:0003528,6.02e-07,29;UBERON:0002791,6.02e-07,29;UBERON:0001893,6.02e-07,29;UBERON:0000007,7.71e-07,8;UBERON:0003296,7.71e-07,8;UBERON:0010133,7.71e-07,8 | |||
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|short_description=p1@Gpr98 | |||
}} |
Revision as of 01:10, 13 September 2013
Short description: | p1@Gpr98 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr98_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 0bp_to_ENSMUST00000095585, ENSMUST00000126444, ENSMUST00000128585, ENSMUST00000146749, NM_054053, uc007rhn.1, uc007rhs.1, uc007rht.1, uc007rhu.1_5end |
EntrezGene: | Gpr98 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.25e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-13 | 23 |
ectodermal cell | 1.02e-12 | 44 |
neurectodermal cell | 1.02e-12 | 44 |
neural cell | 6.77e-12 | 43 |
neuron | 5.60e-09 | 33 |
neuronal stem cell | 5.60e-09 | 33 |
neuroblast | 5.60e-09 | 33 |
electrically signaling cell | 5.60e-09 | 33 |
neuron of cerebral cortex | 1.76e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.