FFCP PHASE1:Mm9::chr14:62175583..62175618,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66674|HGNC=|MCL_coexpression_id=60|UniProt=Q3UBW1|association_with_transcript=0bp_to_ENSMUST00000100496_5end|description=CAGE_peak_2_at_6330409N04Rik_5end|id=chr14:62175583..62175618,-|ontology_enrichment_celltype=CL:0000117!1.53e-12!23;CL:0000337!1.53e-12!23;CL:0000540!1.40e-10!33;CL:0000047!1.40e-10!33;CL:0000031!1.40e-10!33;CL:0000404!1.40e-10!33;CL:0000393!3.39e-09!39;CL:0000211!3.39e-09!39;CL:0000221!1.64e-08!44;CL:0000133!1.64e-08!44;CL:0002319!2.48e-08!43;CL:0002321!3.28e-08!70;CL:0000220!3.28e-08!70;CL:0000055!8.19e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0000540,1.40e-10,33;CL:0000047,1.40e-10,33;CL:0000031,1.40e-10,33;CL:0000404,1.40e-10,33;CL:0000393,3.39e-09,39;CL:0000211,3.39e-09,39;CL:0000221,1.64e-08,44;CL:0000133,1.64e-08,44;CL:0002319,2.48e-08,43;CL:0002321,3.24e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.89e-17!75;UBERON:0001016!3.89e-17!75;UBERON:0001017!1.48e-16!73;UBERON:0005743!1.48e-16!73;UBERON:0002020!3.95e-16!34;UBERON:0001049!5.22e-15!52;UBERON:0005068!5.22e-15!52;UBERON:0006241!5.22e-15!52;UBERON:0007135!5.22e-15!52;UBERON:0004121!1.19e-14!102;UBERON:0000924!1.19e-14!102;UBERON:0006601!1.19e-14!102;UBERON:0000955!1.14e-13!50;UBERON:0006238!1.14e-13!50;UBERON:0000033!1.21e-13!63;UBERON:0002616!1.99e-13!49;UBERON:0002791!4.41e-13!29;UBERON:0003528!4.41e-13!29;UBERON:0001893!4.41e-13!29;UBERON:0002346!8.62e-13!71;UBERON:0003075!8.62e-13!71;UBERON:0007284!8.62e-13!71;UBERON:0003080!6.74e-11!40;UBERON:0002780!2.04e-10!39;UBERON:0001890!2.04e-10!39;UBERON:0006240!2.04e-10!39;UBERON:0004111!1.01e-09!122;UBERON:0003056!1.27e-09!49;UBERON:0000956!4.26e-09!21;UBERON:0001869!4.26e-09!21;UBERON:0000203!4.26e-09!21;UBERON:0000025!5.80e-08!114;UBERON:0002619!8.13e-08!17;UBERON:0002021!4.41e-07!10;UBERON:0000411!4.41e-07!10;UBERON:0001950!4.41e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.89e-17,75;UBERON:0001017,1.48e-16,73;UBERON:0000073,2.45e-16,54;UBERON:0002020,3.95e-16,34;UBERON:0004121,1.41e-15,95;UBERON:0000924,1.41e-15,95;UBERON:0006601,1.41e-15,95;UBERON:0010314,2.70e-15,92;UBERON:0001049,5.22e-15,52;UBERON:0005068,5.22e-15,52;UBERON:0006241,5.22e-15,52;UBERON:0007135,5.22e-15,52;UBERON:0002346,4.53e-14,64;UBERON:0003075,4.53e-14,64;UBERON:0007284,4.53e-14,64;UBERON:0010371,2.03e-13,73;UBERON:0003528,4.41e-13,29;UBERON:0002791,4.41e-13,29;UBERON:0001893,4.41e-13,29;UBERON:0000955,7.41e-12,47;UBERON:0006238,7.41e-12,47;UBERON:0002616,1.28e-11,46;UBERON:0003080,6.74e-11,40;UBERON:0002780,2.04e-10,39;UBERON:0001890,2.04e-10,39;UBERON:0006240,2.04e-10,39;UBERON:0004111,1.01e-09,122;UBERON:0003056,1.27e-09,49;UBERON:0000956,4.26e-09,21;UBERON:0001869,4.26e-09,21;UBERON:0000203,4.26e-09,21;UBERON:0000025,5.80e-08,114;UBERON:0002619,8.13e-08,17;UBERON:0002021,4.41e-07,10;UBERON:0000411,4.41e-07,10;UBERON:0001950,4.41e-07,10|phase1_expression=6.56610273129655,3.83872948403297,4.09499315450582,6.95667686005709,8.5152274090879,3.69334398206158,4.90586545250604,1.80772652818207,2.25261955442667,2.57470978954193,2.39705155515707,3.11111420081812,1.36960583944965,1.83582845079895,2.6648780945253,1.21485160433896,2.79824751251259,1.73504190947031,1.50825876966313,1.27316895539409,10.1201515279773,3.67376519443276,4.70159620450084,2.71987118748791,4.12936705920906,2.8711598205751,5.1691439539089,5.17130958446134,4.75058548640935,5.54466285471848,3.54768817048488,5.71527606113668,6.76571266343027,0,4.33277429626912,3.15845826181135,1.42918549383658,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,4.28049181116963,5.06884656097573,4.22157529971868,1.56478268869608,4.14247797122848,2.85592037554813,5.05517737593137,3.91961980551015,4.31257693094915,1.51004345451963,1.45072428402269,2.68875039313971,3.60163210450326,2.86533439938757,3.6097046459421,9.1042407386819,8.46385566835253,10.775133859605,1.69422266034566,4.4464739805557,4.94944844504769,1.97773272513395,2.1314403448383,3.59520132622086,2.30530983192933,8.39885859698669,5.40023753326763,6.09942387919008,11.7116903605559,11.0434270475807,7.83941114975706,7.3801012684042,7.35375029288017,13.2139057199266,18.2592893461818,19.6616362567992,8.83638127792299,15.5528994124096,6.25096044668112,14.5175159480718,15.757353080887,18.0301932376636,15.0260578591571,13.2405663143166,10.2519695203915,6.28527404665428,5.7434385681157,3.76823835312181,7.74381489283248,7.47968467078526,7.01614149129162,7.14754059192436,7.6164570806547,7.3031098468511,4.77204903218562,3.89679006904303,5.65343319216544,5.49289337129054,3.84979432242953,2.54805239706646,0,9.95858788651585,10.1343946190039,10.6160133453104,4.5673551887624,2.84831672011889,5.19547486726887,4.3371331691534,1.21786191324856,2.99800146432876,3.61734337326294,4.46837087115678,4.77533047052767,2.22475470960936,2.31358971071859,0.884610551949874,3.88240439873782,3.09178125844551,4.84875253135222,3.72783522436244,7.90508151931177,8.3778682725382,3.57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| ||
|EntrezGene=66674 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q3UBW1 | |||
|association_with_transcript=0bp_to_ENSMUST00000100496_5end | |||
|description=CAGE_peak_2_at_6330409N04Rik_5end | |||
|id=chr14:62175583..62175618,- | |||
|ontology_enrichment_celltype=CL:0000117!1.53e-12!23;CL:0000337!1.53e-12!23;CL:0000540!1.40e-10!33;CL:0000047!1.40e-10!33;CL:0000031!1.40e-10!33;CL:0000404!1.40e-10!33;CL:0000393!3.39e-09!39;CL:0000211!3.39e-09!39;CL:0000221!1.64e-08!44;CL:0000133!1.64e-08!44;CL:0002319!2.48e-08!43;CL:0002321!3.28e-08!70;CL:0000220!3.28e-08!70;CL:0000055!8.19e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0000540,1.40e-10,33;CL:0000047,1.40e-10,33;CL:0000031,1.40e-10,33;CL:0000404,1.40e-10,33;CL:0000393,3.39e-09,39;CL:0000211,3.39e-09,39;CL:0000221,1.64e-08,44;CL:0000133,1.64e-08,44;CL:0002319,2.48e-08,43;CL:0002321,3.24e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.89e-17!75;UBERON:0001016!3.89e-17!75;UBERON:0001017!1.48e-16!73;UBERON:0005743!1.48e-16!73;UBERON:0002020!3.95e-16!34;UBERON:0001049!5.22e-15!52;UBERON:0005068!5.22e-15!52;UBERON:0006241!5.22e-15!52;UBERON:0007135!5.22e-15!52;UBERON:0004121!1.19e-14!102;UBERON:0000924!1.19e-14!102;UBERON:0006601!1.19e-14!102;UBERON:0000955!1.14e-13!50;UBERON:0006238!1.14e-13!50;UBERON:0000033!1.21e-13!63;UBERON:0002616!1.99e-13!49;UBERON:0002791!4.41e-13!29;UBERON:0003528!4.41e-13!29;UBERON:0001893!4.41e-13!29;UBERON:0002346!8.62e-13!71;UBERON:0003075!8.62e-13!71;UBERON:0007284!8.62e-13!71;UBERON:0003080!6.74e-11!40;UBERON:0002780!2.04e-10!39;UBERON:0001890!2.04e-10!39;UBERON:0006240!2.04e-10!39;UBERON:0004111!1.01e-09!122;UBERON:0003056!1.27e-09!49;UBERON:0000956!4.26e-09!21;UBERON:0001869!4.26e-09!21;UBERON:0000203!4.26e-09!21;UBERON:0000025!5.80e-08!114;UBERON:0002619!8.13e-08!17;UBERON:0002021!4.41e-07!10;UBERON:0000411!4.41e-07!10;UBERON:0001950!4.41e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.89e-17,75;UBERON:0001017,1.48e-16,73;UBERON:0000073,2.45e-16,54;UBERON:0002020,3.95e-16,34;UBERON:0004121,1.41e-15,95;UBERON:0000924,1.41e-15,95;UBERON:0006601,1.41e-15,95;UBERON:0010314,2.70e-15,92;UBERON:0001049,5.22e-15,52;UBERON:0005068,5.22e-15,52;UBERON:0006241,5.22e-15,52;UBERON:0007135,5.22e-15,52;UBERON:0002346,4.53e-14,64;UBERON:0003075,4.53e-14,64;UBERON:0007284,4.53e-14,64;UBERON:0010371,2.03e-13,73;UBERON:0003528,4.41e-13,29;UBERON:0002791,4.41e-13,29;UBERON:0001893,4.41e-13,29;UBERON:0000955,7.41e-12,47;UBERON:0006238,7.41e-12,47;UBERON:0002616,1.28e-11,46;UBERON:0003080,6.74e-11,40;UBERON:0002780,2.04e-10,39;UBERON:0001890,2.04e-10,39;UBERON:0006240,2.04e-10,39;UBERON:0004111,1.01e-09,122;UBERON:0003056,1.27e-09,49;UBERON:0000956,4.26e-09,21;UBERON:0001869,4.26e-09,21;UBERON:0000203,4.26e-09,21;UBERON:0000025,5.80e-08,114;UBERON:0002619,8.13e-08,17;UBERON:0002021,4.41e-07,10;UBERON:0000411,4.41e-07,10;UBERON:0001950,4.41e-07,10 | |||
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| |||
|short_description=p2@6330409N04Rik | |||
}} |
Revision as of 02:41, 13 September 2013
Short description: | p2@6330409N04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_6330409N04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000100496_5end |
EntrezGene: | 6330409N04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.52e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-12 | 23 |
neuron | 1.40e-10 | 33 |
neuronal stem cell | 1.40e-10 | 33 |
neuroblast | 1.40e-10 | 33 |
electrically signaling cell | 1.40e-10 | 33 |
electrically responsive cell | 3.39e-09 | 39 |
electrically active cell | 3.39e-09 | 39 |
ectodermal cell | 1.64e-08 | 44 |
neurectodermal cell | 1.64e-08 | 44 |
neural cell | 2.48e-08 | 43 |
embryonic cell | 3.24e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.