FFCP PHASE1:Hg19::chr5:137804130..137804156,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1958|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=3238|TSSclassifier=N|UniProt=|association_with_transcript=-334bp_to_M24019_5end|coexpression_cluster_id=C505|description=CAGE_peak_5_at_EGR1_5end|id=chr5:137804130..137804156,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000134;1.45e-08;55!CL:0000048;1.13e-07;58!CL:0000723;1.74e-07;61|ontology_enrichment_celltype_v019_2=CL:0000569,2.88e-07,4;CL:0000011,2.88e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:193!3.44e-08!29;DOID:120!5.02e-08!27|ontology_enrichment_disease_v019=DOID:120;5.47e-07;27|ontology_enrichment_disease_v019_2=DOID:120,4.64e-07,27|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,1.04474251279935,0.245733936501509,0,0,0.263766978228454,3.21792517696121,3.31397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0.30120591877825,0.739508020333575,0,0.142169232487422,0.587200878669695,0,0,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0,0.464858073811369,0,1.23882548358041,0.863077176966451,0.256160706529101,1.41889337933151,3.44745680736619,1.29096936716765,2.70852973188684,0,0,0.449446968890169,3.97909060082173,4.49300637906531,10.8687311385837,0.329851300186716,0,0.426224750532694,1.16083695451434,0,0.622822248995575,0.502497330513487,1.0429658368404,1.3031330682307,0,0.736555271975129,0.949387162322653,0,0.637812899895131,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.590129310341499,0.393010762749165,0,0,0,0,0,0.557052284425868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.80642697289893,0.267440195783507,0.144824403882799,0,1.34140171940727,0.511450247374121,0.722878304769133,0,0.579386075843295,0,1.94653948121054,1.41802225746102,0.886917589850256,1.05401742831751,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0.397227542439656,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0,0,0,0.117434498643765,0,1.12360645361799,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.612975591598039,0,0.113432183160021,0.538168907066586,0.213557388818567,0.423863802319124,0.900273288253207,0,1.03056216018252,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0.552299391853796,0.161646056818812,1.06502877754984,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,4.17931135228781,0,0,0,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,1.20364978706088,0,0,0,0.34779121492523,0.234817388471643,0,0.925971025153221,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0.829312462163088,0.576479813667846,0.88369703398466,0,0,0,3.4214489204541,0.102827492703324,0,0,0,0,0.2933531432838,0.646358578788889,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0.266422179016099,2.43062589218851,0,0,0,2.48774364119782,0.791951872933429,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0.289562613335158,0.821905290201534,0,0.224170287987055,0,0,0.256686072559497,0,0,0,1.50764638800914,0.637938751653163,0,0,0,3.92612773501248,0.500170521059677,1.89885516589815,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,1.32845119707087,0.737476674166813,0.0868836144680828,0.391602314925481,0.343143423810856,0.413536052245775,0.647142602455851,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0.308419387605311,0.532685175939381,0.328508624055237,0.519254429183621,0.813472649219715,0,0,0.368323955743585,0,0,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,0.0915694648183434,0,0,0,0,0,1.3864375540318,1.22802939780904,2.06754858726796,0.214840489736547,0,0,0.356128142586949,0.495854746082934,0.192190067365106,0.893288987462089,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,1.56989728039846,0.719489830333259,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.545999645631943,0.141405431953713,0,0,1.32687795048244,0,0,2.62357900818653,0.202910376962704,0,0.563391205064483,0.860468113224309,0.294747123039363,0,0.709522128141196,4.01104507065562,0.658589785919804,0,0,0.48111056362756,0,0,0.0941438007767792,0,3.36942951335251,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0.14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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3238 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-334bp_to_M24019_5end | |||
|coexpression_cluster_id=C505 | |||
|description=CAGE_peak_5_at_EGR1_5end | |||
|id=chr5:137804130..137804156,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.45e-08;55!CL:0000048;1.13e-07;58!CL:0000723;1.74e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,2.88e-07,4;CL:0000011,2.88e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!3.44e-08!29;DOID:120!5.02e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:120;5.47e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:120,4.64e-07,27 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@EGR1 | |||
}} |
Revision as of 13:25, 13 September 2013
Short description: | p5@EGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_EGR1_5end |
Coexpression cluster: | C505_mature_CD14_sacrococcigeal_Mast_chorionic_glassy_oral |
Association with transcript: | -334bp_to_M24019_5end |
EntrezGene: | EGR1 |
HGNC: | 3238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 2.88e-07 | 4 |
migratory trunk neural crest cell | 2.88e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 4.64e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.