FFCP PHASE1:Mm9::chr17:27623700..27623705,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:27623700..27623705,-|id=chr17:27623700..27623705,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.52e-10!63;UBERON:0001049!1.35e-09!52;UBERON:0005068!1.35e-09!52;UBERON:0006241!1.35e-09!52;UBERON:0007135!1.35e-09!52;UBERON:0007811!3.11e-09!86;UBERON:0003076!6.07e-09!12;UBERON:0003057!6.07e-09!12;UBERON:0001017!6.28e-09!73;UBERON:0005743!6.28e-09!73;UBERON:0000153!1.59e-08!94;UBERON:0000073!1.71e-08!75;UBERON:0001016!1.71e-08!75;UBERON:0004121!4.54e-08!102;UBERON:0000924!4.54e-08!102;UBERON:0006601!4.54e-08!102;UBERON:0002298!6.07e-08!6;UBERON:0000955!6.75e-08!50;UBERON:0006238!6.75e-08!50;UBERON:0002346!1.01e-07!71;UBERON:0003075!1.01e-07!71;UBERON:0007284!1.01e-07!71;UBERON:0002616!4.36e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.16e-18,4;UBERON:0002680,1.16e-18,4;UBERON:0001895,1.16e-18,4;UBERON:0010092,1.16e-18,4;UBERON:0006215,1.16e-18,4;UBERON:0004733,8.26e-13,6;UBERON:0004732,8.26e-13,6;UBERON:0002028,8.26e-13,6;UBERON:0007277,8.26e-13,6;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0002038,4.77e-07,3;UBERON:0009663,4.77e-07,3;UBERON:0009661,4.77e-07,3;UBERON:0000125,4.77e-07,3;UBERON:0002308,4.77e-07,3;UBERON:0003076,6.76e-07,12;UBERON:0003057,6.76e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,1.12552522006336,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.19786231632332,23.8769245767339,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0,0.41557608911912,0.811206315338788,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.701794825336225,0,0.191288332068843,0,0|short_description=p@chr17:27623700..27623705,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:27623700..27623705,- | |||
|id=chr17:27623700..27623705,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.52e-10!63;UBERON:0001049!1.35e-09!52;UBERON:0005068!1.35e-09!52;UBERON:0006241!1.35e-09!52;UBERON:0007135!1.35e-09!52;UBERON:0007811!3.11e-09!86;UBERON:0003076!6.07e-09!12;UBERON:0003057!6.07e-09!12;UBERON:0001017!6.28e-09!73;UBERON:0005743!6.28e-09!73;UBERON:0000153!1.59e-08!94;UBERON:0000073!1.71e-08!75;UBERON:0001016!1.71e-08!75;UBERON:0004121!4.54e-08!102;UBERON:0000924!4.54e-08!102;UBERON:0006601!4.54e-08!102;UBERON:0002298!6.07e-08!6;UBERON:0000955!6.75e-08!50;UBERON:0006238!6.75e-08!50;UBERON:0002346!1.01e-07!71;UBERON:0003075!1.01e-07!71;UBERON:0007284!1.01e-07!71;UBERON:0002616!4.36e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.16e-18,4;UBERON:0002680,1.16e-18,4;UBERON:0001895,1.16e-18,4;UBERON:0010092,1.16e-18,4;UBERON:0006215,1.16e-18,4;UBERON:0004733,8.26e-13,6;UBERON:0004732,8.26e-13,6;UBERON:0002028,8.26e-13,6;UBERON:0007277,8.26e-13,6;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0002038,4.77e-07,3;UBERON:0009663,4.77e-07,3;UBERON:0009661,4.77e-07,3;UBERON:0000125,4.77e-07,3;UBERON:0002308,4.77e-07,3;UBERON:0003076,6.76e-07,12;UBERON:0003057,6.76e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,1.12552522006336,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.19786231632332,23.8769245767339,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0,0.41557608911912,0.811206315338788,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.701794825336225,0,0.191288332068843,0,0 | |||
|short_description=p@chr17:27623700..27623705,- | |||
}} |
Revision as of 13:53, 13 September 2013
Short description: | p@chr17:27623700..27623705, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:27623700..27623705, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.16e-18 | 4 |
regional part of metencephalon | 1.16e-18 | 4 |
metencephalon | 1.16e-18 | 4 |
future metencephalon | 1.16e-18 | 4 |
rhombic lip | 1.16e-18 | 4 |
segmental subdivision of hindbrain | 8.26e-13 | 6 |
segmental subdivision of nervous system | 8.26e-13 | 6 |
hindbrain | 8.26e-13 | 6 |
presumptive hindbrain | 8.26e-13 | 6 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
substantia nigra | 4.77e-07 | 3 |
telencephalic nucleus | 4.77e-07 | 3 |
midbrain nucleus | 4.77e-07 | 3 |
neural nucleus | 4.77e-07 | 3 |
nucleus of brain | 4.77e-07 | 3 |
posterior neural tube | 6.76e-07 | 12 |
chordal neural plate | 6.76e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.