FFCP PHASE1:Hg19::chr5:147582387..147582396,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=404203|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29486|TSSclassifier=S|UniProt=Q6UWN8|association_with_transcript=-7bp_to_ENST00000325630,uc003lpa.2_5end|coexpression_cluster_id=C106|description=CAGE_peak_7_at_SPINK6_5end|id=chr5:147582387..147582396,+|ontology_enrichment_celltype=CL:0002159!7.14e-27!13;CL:0000622!1.04e-14!5;CL:0002166!5.59e-14!3;CL:0000154!2.80e-12!6;CL:0000317!2.02e-10!2;CL:1000448!2.02e-10!2;CL:0002308!2.02e-10!2;CL:0002140!2.02e-10!2;CL:0000575!5.07e-10!2;CL:0002077!1.30e-09!33;CL:0000362!1.49e-09!8;CL:0000066!2.00e-09!254;CL:0000150!3.28e-08!9;CL:0000221!1.44e-07!71|ontology_enrichment_celltype_v019=CL:0000317;2.23e-25;2!CL:1000448;2.23e-25;2!CL:0002308;2.23e-25;2!CL:0002140;2.23e-25;2!CL:0002159;3.33e-14;14!CL:0000362;8.16e-13;9!CL:0000622;9.38e-11;5!CL:0000154;4.11e-09;6!CL:0000575;2.18e-07;2|ontology_enrichment_celltype_v019_2=CL:0000317,3.05e-25,2;CL:1000448,3.05e-25,2;CL:0002308,3.05e-25,2;CL:0002140,3.05e-25,2;CL:0002159,3.63e-14,14;CL:0000362,9.22e-13,9;CL:0000622,1.06e-10,5;CL:0000066,2.58e-09,253;CL:0000154,4.55e-09,6;CL:0000575,2.12e-07,2|ontology_enrichment_development_v019=UBERON:0008947;4.80e-34;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.09e-10,106;DOID:0050687,1.36e-07,143|ontology_enrichment_uberon=UBERON:0001737!2.78e-42!9;UBERON:0001557!3.92e-19!19;UBERON:0008947!1.24e-10!38;UBERON:0003258!1.24e-10!38;UBERON:0001708!1.31e-10!4;UBERON:0001704!1.31e-10!4;UBERON:0002419!2.02e-10!2;UBERON:0007771!2.02e-10!2;UBERON:0003297!2.02e-10!2;UBERON:0001821!2.02e-10!2;UBERON:0003487!2.02e-10!2;UBERON:0001820!2.02e-10!2;UBERON:0005089!2.02e-10!2;UBERON:0005088!2.02e-10!2;UBERON:0001004!1.62e-09!72;UBERON:0000065!1.49e-08!53;UBERON:0000072!1.91e-08!46;UBERON:0002090!3.24e-07!6|ontology_enrichment_uberon_v019=UBERON:0001737;2.33e-111;9!UBERON:0001557;2.33e-111;9!UBERON:0002419;2.23e-25;2!UBERON:0007771;2.23e-25;2!UBERON:0003297;2.23e-25;2!UBERON:0001821;2.23e-25;2!UBERON:0003487;2.23e-25;2!UBERON:0001820;2.23e-25;2!UBERON:0000072;1.02e-24;37!UBERON:0000065;8.28e-21;44!UBERON:0001004;5.99e-11;65!UBERON:0001003;6.52e-08;15!UBERON:0007376;6.52e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.19e-111,9;UBERON:0001557,2.12e-52,19;UBERON:0008947,8.81e-26,38;UBERON:0003258,8.81e-26,38;UBERON:0002419,3.05e-25,2;UBERON:0007771,3.05e-25,2;UBERON:0003297,3.05e-25,2;UBERON:0001821,3.05e-25,2;UBERON:0003487,3.05e-25,2;UBERON:0001820,3.05e-25,2;UBERON:0005089,3.05e-25,2;UBERON:0005088,3.05e-25,2;UBERON:0000072,1.14e-20,47;UBERON:0000065,7.25e-18,54;UBERON:0001004,9.08e-13,74;UBERON:0001041,1.05e-10,87;UBERON:0001048,1.01e-09,160;UBERON:0001003,7.01e-08,15;UBERON:0007376,7.01e-08,15;UBERON:0007383,7.01e-08,15;UBERON:0004921,1.54e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,4.8505788016336,3.70886318171824,4.82022059766964,4.85293480022533,4.57546832594053,4.98268300133303,6.33707148352773,5.101758093259,9.23393176671337,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,1.40740561376283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,3.36942951335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.921482106297696,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,5.1852687615695,0.407712618220842,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=404203 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29486 | |||
|TSSclassifier=S | |||
|UniProt=Q6UWN8 | |||
|association_with_transcript=-7bp_to_ENST00000325630,uc003lpa.2_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_7_at_SPINK6_5end | |||
|id=chr5:147582387..147582396,+ | |||
|ontology_enrichment_celltype=CL:0002159!7.14e-27!13;CL:0000622!1.04e-14!5;CL:0002166!5.59e-14!3;CL:0000154!2.80e-12!6;CL:0000317!2.02e-10!2;CL:1000448!2.02e-10!2;CL:0002308!2.02e-10!2;CL:0002140!2.02e-10!2;CL:0000575!5.07e-10!2;CL:0002077!1.30e-09!33;CL:0000362!1.49e-09!8;CL:0000066!2.00e-09!254;CL:0000150!3.28e-08!9;CL:0000221!1.44e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.23e-25;2!CL:1000448;2.23e-25;2!CL:0002308;2.23e-25;2!CL:0002140;2.23e-25;2!CL:0002159;3.33e-14;14!CL:0000362;8.16e-13;9!CL:0000622;9.38e-11;5!CL:0000154;4.11e-09;6!CL:0000575;2.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,3.05e-25,2;CL:1000448,3.05e-25,2;CL:0002308,3.05e-25,2;CL:0002140,3.05e-25,2;CL:0002159,3.63e-14,14;CL:0000362,9.22e-13,9;CL:0000622,1.06e-10,5;CL:0000066,2.58e-09,253;CL:0000154,4.55e-09,6;CL:0000575,2.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.80e-34;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.09e-10,106;DOID:0050687,1.36e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.78e-42!9;UBERON:0001557!3.92e-19!19;UBERON:0008947!1.24e-10!38;UBERON:0003258!1.24e-10!38;UBERON:0001708!1.31e-10!4;UBERON:0001704!1.31e-10!4;UBERON:0002419!2.02e-10!2;UBERON:0007771!2.02e-10!2;UBERON:0003297!2.02e-10!2;UBERON:0001821!2.02e-10!2;UBERON:0003487!2.02e-10!2;UBERON:0001820!2.02e-10!2;UBERON:0005089!2.02e-10!2;UBERON:0005088!2.02e-10!2;UBERON:0001004!1.62e-09!72;UBERON:0000065!1.49e-08!53;UBERON:0000072!1.91e-08!46;UBERON:0002090!3.24e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.33e-111;9!UBERON:0001557;2.33e-111;9!UBERON:0002419;2.23e-25;2!UBERON:0007771;2.23e-25;2!UBERON:0003297;2.23e-25;2!UBERON:0001821;2.23e-25;2!UBERON:0003487;2.23e-25;2!UBERON:0001820;2.23e-25;2!UBERON:0000072;1.02e-24;37!UBERON:0000065;8.28e-21;44!UBERON:0001004;5.99e-11;65!UBERON:0001003;6.52e-08;15!UBERON:0007376;6.52e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.19e-111,9;UBERON:0001557,2.12e-52,19;UBERON:0008947,8.81e-26,38;UBERON:0003258,8.81e-26,38;UBERON:0002419,3.05e-25,2;UBERON:0007771,3.05e-25,2;UBERON:0003297,3.05e-25,2;UBERON:0001821,3.05e-25,2;UBERON:0003487,3.05e-25,2;UBERON:0001820,3.05e-25,2;UBERON:0005089,3.05e-25,2;UBERON:0005088,3.05e-25,2;UBERON:0000072,1.14e-20,47;UBERON:0000065,7.25e-18,54;UBERON:0001004,9.08e-13,74;UBERON:0001041,1.05e-10,87;UBERON:0001048,1.01e-09,160;UBERON:0001003,7.01e-08,15;UBERON:0007376,7.01e-08,15;UBERON:0007383,7.01e-08,15;UBERON:0004921,1.54e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,4.8505788016336,3.70886318171824,4.82022059766964,4.85293480022533,4.57546832594053,4.98268300133303,6.33707148352773,5.101758093259,9.23393176671337,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,1.40740561376283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,3.36942951335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.921482106297696,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,5.1852687615695,0.407712618220842,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0.207216164163037,0.85359238546975,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p7@SPINK6 | |||
}} |
Revision as of 13:55, 13 September 2013
Short description: | p7@SPINK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SPINK6_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -7bp_to_ENST00000325630, uc003lpa.2_5end |
EntrezGene: | SPINK6 |
HGNC: | 29486 |
UniProt: | Q6UWN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 3.05e-25 | 2 |
epithelial cell of sweat gland | 3.05e-25 | 2 |
epithelial cell of skin gland | 3.05e-25 | 2 |
acinar cell of sebaceous gland | 3.05e-25 | 2 |
general ecto-epithelial cell | 3.63e-14 | 14 |
epidermal cell | 9.22e-13 | 9 |
acinar cell | 1.06e-10 | 5 |
epithelial cell | 2.58e-09 | 253 |
protein secreting cell | 4.55e-09 | 6 |
corneal epithelial cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.19e-111 | 9 |
upper respiratory tract | 2.12e-52 | 19 |
respiratory primordium | 8.81e-26 | 38 |
endoderm of foregut | 8.81e-26 | 38 |
skin gland | 3.05e-25 | 2 |
epidermis gland | 3.05e-25 | 2 |
gland of integumental system | 3.05e-25 | 2 |
sebaceous gland | 3.05e-25 | 2 |
skin sebaceous gland | 3.05e-25 | 2 |
sweat gland | 3.05e-25 | 2 |
sweat gland placode | 3.05e-25 | 2 |
sebaceous gland placode | 3.05e-25 | 2 |
segment of respiratory tract | 1.14e-20 | 47 |
respiratory tract | 7.25e-18 | 54 |
respiratory system | 9.08e-13 | 74 |
foregut | 1.05e-10 | 87 |
primordium | 1.01e-09 | 160 |
skin epidermis | 7.01e-08 | 15 |
outer epithelium | 7.01e-08 | 15 |
enveloping layer of ectoderm | 7.01e-08 | 15 |
subdivision of digestive tract | 1.54e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.09e-10 | 106 |
cell type cancer | 1.36e-07 | 143 |
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